RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 PDZD4Q76G19 769 aaPredicted RBP34.95■■■■□ 3.18
CSNK1E-204ENST00000403904 TMEM150AQ86TG1 271 aa34.95■■■■□ 3.18
CSNK1E-204ENST00000403904 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP34.94■■■■□ 3.18
CSNK1E-204ENST00000403904 GOLGA8SH3BPF8 625 aa34.94■■■■□ 3.18
CSNK1E-204ENST00000403904 ATMINO43313 823 aaPredicted RBP34.94■■■■□ 3.18
CSNK1E-204ENST00000403904 F11P03951 625 aa34.94■■■■□ 3.18
CSNK1E-204ENST00000403904 KCNA5P22460 613 aa34.94■■■■□ 3.18
CSNK1E-204ENST00000403904 RRM1P23921 792 aa34.94■■■■□ 3.18
CSNK1E-204ENST00000403904 CCR2P41597 374 aa34.94■■■■□ 3.18
CSNK1E-204ENST00000403904 SLC6A3Q01959 620 aa34.94■■■■□ 3.18
CSNK1E-204ENST00000403904 ZNF268Q14587 947 aaPredicted RBP34.94■■■■□ 3.18
CSNK1E-204ENST00000403904 TAF5Q15542 800 aa34.94■■■■□ 3.18
CSNK1E-204ENST00000403904 MON1AQ86VX9 555 aa34.94■■■■□ 3.18
CSNK1E-204ENST00000403904 ZDHHC17Q8IUH5 632 aa34.94■■■■□ 3.18
CSNK1E-204ENST00000403904 NMUR1Q9HB89 426 aa34.94■■■■□ 3.18
CSNK1E-204ENST00000403904 OBSL1O75147 1896 aa34.93■■■■□ 3.18
CSNK1E-204ENST00000403904 A0A1W2PQH9 124 aa34.93■■■■□ 3.18
CSNK1E-204ENST00000403904 NRG2O14511 850 aaPredicted RBP34.93■■■■□ 3.18
CSNK1E-204ENST00000403904 TADA3O75528 432 aa34.93■■■■□ 3.18
CSNK1E-204ENST00000403904 SLC5A9Q2M3M2 681 aa34.93■■■■□ 3.18
CSNK1E-204ENST00000403904 HFE2Q6ZVN8 426 aa34.93■■■■□ 3.18
CSNK1E-204ENST00000403904 SCD5Q86SK9 330 aa34.93■■■■□ 3.18
CSNK1E-204ENST00000403904 ACRBPQ8NEB7 543 aa34.93■■■■□ 3.18
CSNK1E-204ENST00000403904 IRGQQ8WZA9 623 aa34.93■■■■□ 3.18
CSNK1E-204ENST00000403904 ZNF653Q96CK0 615 aa34.93■■■■□ 3.18
CSNK1E-204ENST00000403904 TCEAL4Q96EI5 215 aa34.93■■■■□ 3.18
CSNK1E-204ENST00000403904 MCRS1Q96EZ8 462 aa34.93■■■■□ 3.18
CSNK1E-204ENST00000403904 THAP2Q9H0W7 228 aa34.93■■■■□ 3.18
CSNK1E-204ENST00000403904 TRPM5Q9NZQ8 1165 aa34.93■■■■□ 3.18
CSNK1E-204ENST00000403904 NCANO14594 1321 aa34.93■■■■□ 3.18
CSNK1E-204ENST00000403904 A0A1W2PRU2 124 aa34.92■■■■□ 3.18
CSNK1E-204ENST00000403904 IPO7O95373 1038 aaKnown RBP34.92■■■■□ 3.18
CSNK1E-204ENST00000403904 ABL1P00519 1130 aa34.92■■■■□ 3.18
CSNK1E-204ENST00000403904 GJA1P17302 382 aa34.92■■■■□ 3.18
CSNK1E-204ENST00000403904 MAGEA1P43355 309 aa34.92■■■■□ 3.18
CSNK1E-204ENST00000403904 FAM102AQ5T9C2 384 aaPredicted RBP34.92■■■■□ 3.18
CSNK1E-204ENST00000403904 TOGARAM2Q6ZUX3 1019 aa34.92■■■■□ 3.18
CSNK1E-204ENST00000403904 LEMD2Q8NC56 503 aa34.92■■■■□ 3.18
CSNK1E-204ENST00000403904 SMRP1Q8NCR6 262 aa34.92■■■■□ 3.18
CSNK1E-204ENST00000403904 PDZD8Q8NEN9 1154 aa34.92■■■■□ 3.18
CSNK1E-204ENST00000403904 OVCA2Q8WZ82 227 aa34.92■■■■□ 3.18
CSNK1E-204ENST00000403904 DESI2Q9BSY9 194 aa34.92■■■■□ 3.18
CSNK1E-204ENST00000403904 TLR8Q9NR97 1041 aaKnown RBP34.92■■■■□ 3.18
CSNK1E-204ENST00000403904 WDR35Q9P2L0 1181 aa34.92■■■■□ 3.18
CSNK1E-204ENST00000403904 CD207Q9UJ71 328 aa34.92■■■■□ 3.18
CSNK1E-204ENST00000403904 ANAPC1Q9H1A4 1944 aa34.92■■■■□ 3.18
CSNK1E-204ENST00000403904 DENND4CQ5VZ89 1909 aa34.92■■■■□ 3.18
CSNK1E-204ENST00000403904 ANKRD62A6NC57 917 aa34.91■■■■□ 3.18
CSNK1E-204ENST00000403904 SART1O43290 800 aaKnown RBP34.91■■■■□ 3.18
CSNK1E-204ENST00000403904 H2AFZP0C0S5 128 aa34.91■■■■□ 3.18
CSNK1E-204ENST00000403904 YWHAGP61981 247 aaKnown RBP eCLIP34.91■■■■□ 3.18
CSNK1E-204ENST00000403904 ATAT1Q5SQI0 421 aa34.91■■■■□ 3.18
CSNK1E-204ENST00000403904 H2AFVQ71UI9 128 aa34.91■■■■□ 3.18
CSNK1E-204ENST00000403904 MAFAQ8NHW3 353 aaPredicted RBP34.91■■■■□ 3.18
CSNK1E-204ENST00000403904 FAM149B1Q96BN6 582 aa34.91■■■■□ 3.18
CSNK1E-204ENST00000403904 TRIM11Q96F44 468 aa34.91■■■■□ 3.18
CSNK1E-204ENST00000403904 ATXN3LQ9H3M9 355 aa34.91■■■■□ 3.18
CSNK1E-204ENST00000403904 OSER1Q9NX31 292 aa34.91■■■■□ 3.18
CSNK1E-204ENST00000403904 CNOT8Q9UFF9 292 aaKnown RBP34.91■■■■□ 3.18
CSNK1E-204ENST00000403904 REXO2Q9Y3B8 237 aaKnown RBP34.91■■■■□ 3.18
CSNK1E-204ENST00000403904 PCDHA13Q9Y5I0 950 aa34.91■■■■□ 3.18
CSNK1E-204ENST00000403904 ZNF840PA6NDX5 716 aa34.91■■■■□ 3.18
CSNK1E-204ENST00000403904 GRAP2O75791 330 aa34.91■■■■□ 3.18
CSNK1E-204ENST00000403904 ZDHHC11BP0C7U3 371 aa34.91■■■■□ 3.18
CSNK1E-204ENST00000403904 C10orf76Q5T2E6 689 aa34.91■■■■□ 3.18
CSNK1E-204ENST00000403904 HLA-CQ95604 372 aa34.91■■■■□ 3.18
CSNK1E-204ENST00000403904 MYO1AQ9UBC5 1043 aa34.91■■■■□ 3.18
CSNK1E-204ENST00000403904 GJB6O95452 261 aa34.9■■■■□ 3.18
CSNK1E-204ENST00000403904 CDC25CP30307 473 aa34.9■■■■□ 3.18
CSNK1E-204ENST00000403904 GSCP56915 257 aaPredicted RBP34.9■■■■□ 3.18
CSNK1E-204ENST00000403904 EFHC1Q5JVL4 640 aa34.9■■■■□ 3.18
CSNK1E-204ENST00000403904 PRSS36Q5K4E3 855 aa34.9■■■■□ 3.18
CSNK1E-204ENST00000403904 BSPRYQ5W0U4 402 aa34.9■■■■□ 3.18
CSNK1E-204ENST00000403904 C3orf20Q8ND61 904 aa34.9■■■■□ 3.18
CSNK1E-204ENST00000403904 SHKBP1Q8TBC3 707 aa34.9■■■■□ 3.18
CSNK1E-204ENST00000403904 KHSRPQ92945 711 aaKnown RBP eCLIP34.9■■■■□ 3.18
CSNK1E-204ENST00000403904 GCNAQ96QF7 691 aa34.9■■■■□ 3.18
CSNK1E-204ENST00000403904 MOSPD3O75425 235 aa34.89■■■■□ 3.18
CSNK1E-204ENST00000403904 FGF19O95750 216 aa34.89■■■■□ 3.18
CSNK1E-204ENST00000403904 LTFP02788 710 aa34.89■■■■□ 3.18
CSNK1E-204ENST00000403904 MYBL1P10243 752 aa34.89■■■■□ 3.18
CSNK1E-204ENST00000403904 PPP3CCP48454 512 aa34.89■■■■□ 3.18
CSNK1E-204ENST00000403904 CYP4F8P98187 520 aa34.89■■■■□ 3.18
CSNK1E-204ENST00000403904 SLC26A9Q7LBE3 791 aa34.89■■■■□ 3.18
CSNK1E-204ENST00000403904 ARHGAP18Q8N392 663 aa34.89■■■■□ 3.18
CSNK1E-204ENST00000403904 WDR6Q9NNW5 1121 aaKnown RBP34.89■■■■□ 3.18
CSNK1E-204ENST00000403904 AVENQ9NQS1 362 aaPredicted RBP34.89■■■■□ 3.18
CSNK1E-204ENST00000403904 METTL5Q9NRN9 209 aaKnown RBP34.89■■■■□ 3.18
CSNK1E-204ENST00000403904 TCRBV5S1A1TA0A578 114 aa34.88■■■■□ 3.17
CSNK1E-204ENST00000403904 RNASE9P60153 205 aaKnown RBP34.88■■■■□ 3.17
CSNK1E-204ENST00000403904 YWHAZP63104 245 aaKnown RBP34.88■■■■□ 3.17
CSNK1E-204ENST00000403904 GPC5P78333 572 aa34.88■■■■□ 3.17
CSNK1E-204ENST00000403904 DNAJC24Q6P3W2 148 aa34.88■■■■□ 3.17
CSNK1E-204ENST00000403904 CTNNBL1Q8WYA6 563 aaPredicted RBP34.88■■■■□ 3.17
CSNK1E-204ENST00000403904 EDEM1Q92611 657 aa34.88■■■■□ 3.17
CSNK1E-204ENST00000403904 GOLGA1Q92805 767 aa34.88■■■■□ 3.17
CSNK1E-204ENST00000403904 ARHGEF26Q96DR7 871 aa34.88■■■■□ 3.17
CSNK1E-204ENST00000403904 RIPOR3Q96MK2 946 aa34.88■■■■□ 3.17
CSNK1E-204ENST00000403904 TFR2Q9UP52 801 aa34.88■■■■□ 3.17
CSNK1E-204ENST00000403904 MRPS23Q9Y3D9 190 aaKnown RBP34.88■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 6 ms