RNA–Protein interactions for RNA: ENST00000402550.5

CGREF1-204, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 2 BASIC

Gene CGREF1, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-204ENST00000402550 KIAA1328Q86T90 577 aa28.2■■■□□ 2.11
CGREF1-204ENST00000402550 ACRBPQ8NEB7 543 aa28.2■■■□□ 2.11
CGREF1-204ENST00000402550 POMKQ9H5K3 350 aa28.2■■■□□ 2.11
CGREF1-204ENST00000402550 AVENQ9NQS1 362 aaPredicted RBP28.2■■■□□ 2.11
CGREF1-204ENST00000402550 CNGB3Q9NQW8 809 aa28.2■■■□□ 2.11
CGREF1-204ENST00000402550 COMMD8Q9NX08 183 aa28.2■■■□□ 2.11
CGREF1-204ENST00000402550 IL37Q9NZH6 218 aa28.2■■■□□ 2.11
CGREF1-204ENST00000402550 INTUQ9ULD6 942 aa28.2■■■□□ 2.11
CGREF1-204ENST00000402550 ERBB2P04626 1255 aa28.2■■■□□ 2.1
CGREF1-204ENST00000402550 CCR2P41597 374 aa28.2■■■□□ 2.1
CGREF1-204ENST00000402550 GALCP54803 685 aa28.2■■■□□ 2.1
CGREF1-204ENST00000402550 SMAD2Q15796 467 aaKnown RBP28.2■■■□□ 2.1
CGREF1-204ENST00000402550 PDZD4Q76G19 769 aaPredicted RBP28.2■■■□□ 2.1
CGREF1-204ENST00000402550 LEMD2Q8NC56 503 aa28.2■■■□□ 2.1
CGREF1-204ENST00000402550 ZNF653Q96CK0 615 aa28.2■■■□□ 2.1
CGREF1-204ENST00000402550 TTLL2Q9BWV7 592 aa28.2■■■□□ 2.1
CGREF1-204ENST00000402550 IL21Q9HBE4 155 aa28.2■■■□□ 2.1
CGREF1-204ENST00000402550 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.2■■■□□ 2.1
CGREF1-204ENST00000402550 SART1O43290 800 aaKnown RBP28.19■■■□□ 2.1
CGREF1-204ENST00000402550 MYL4P12829 197 aa28.19■■■□□ 2.1
CGREF1-204ENST00000402550 SLC5A9Q2M3M2 681 aa28.19■■■□□ 2.1
CGREF1-204ENST00000402550 C2CD6Q53TS8 623 aa28.19■■■□□ 2.1
CGREF1-204ENST00000402550 OR6B2Q6IFH4 312 aa28.19■■■□□ 2.1
CGREF1-204ENST00000402550 GAREM2Q75VX8 874 aa28.19■■■□□ 2.1
CGREF1-204ENST00000402550 DNAAF5Q86Y56 855 aa28.19■■■□□ 2.1
CGREF1-204ENST00000402550 SCUBE3Q8IX30 993 aa28.19■■■□□ 2.1
CGREF1-204ENST00000402550 ATXN2LQ8WWM7 1075 aaKnown RBP28.19■■■□□ 2.1
CGREF1-204ENST00000402550 ADGRG1Q9Y653 693 aa28.19■■■□□ 2.1
CGREF1-204ENST00000402550 CLUHO75153 1309 aa28.18■■■□□ 2.1
CGREF1-204ENST00000402550 ZBED1O96006 694 aa28.18■■■□□ 2.1
CGREF1-204ENST00000402550 KCNQ1P51787 676 aa28.18■■■□□ 2.1
CGREF1-204ENST00000402550 GPC5P78333 572 aa28.18■■■□□ 2.1
CGREF1-204ENST00000402550 PTP4A2Q12974 167 aa28.18■■■□□ 2.1
CGREF1-204ENST00000402550 ZNF268Q14587 947 aaPredicted RBP28.18■■■□□ 2.1
CGREF1-204ENST00000402550 PRSS36Q5K4E3 855 aa28.18■■■□□ 2.1
CGREF1-204ENST00000402550 TCEAL4Q96EI5 215 aa28.18■■■□□ 2.1
CGREF1-204ENST00000402550 UXTQ9UBK9 157 aaPredicted RBP28.18■■■□□ 2.1
CGREF1-204ENST00000402550 TJP2Q9UDY2 1190 aa28.18■■■□□ 2.1
CGREF1-204ENST00000402550 USP3Q9Y6I4 520 aa28.18■■■□□ 2.1
CGREF1-204ENST00000402550 ZNF197O14709 1029 aa28.17■■■□□ 2.1
CGREF1-204ENST00000402550 F11P03951 625 aa28.17■■■□□ 2.1
CGREF1-204ENST00000402550 FSHRP23945 695 aa28.17■■■□□ 2.1
CGREF1-204ENST00000402550 YWHAQP27348 245 aa28.17■■■□□ 2.1
CGREF1-204ENST00000402550 GABRR2P28476 465 aa28.17■■■□□ 2.1
CGREF1-204ENST00000402550 VAV2P52735 878 aa28.17■■■□□ 2.1
CGREF1-204ENST00000402550 XYLT1Q86Y38 959 aa28.17■■■□□ 2.1
CGREF1-204ENST00000402550 PACSIN1Q9BY11 444 aa28.17■■■□□ 2.1
CGREF1-204ENST00000402550 ULBP1Q9BZM6 244 aa28.17■■■□□ 2.1
CGREF1-204ENST00000402550 THAP2Q9H0W7 228 aa28.17■■■□□ 2.1
CGREF1-204ENST00000402550 CNOT8Q9UFF9 292 aaKnown RBP28.17■■■□□ 2.1
CGREF1-204ENST00000402550 FAM50BQ9Y247 325 aa28.17■■■□□ 2.1
CGREF1-204ENST00000402550 MRPS23Q9Y3D9 190 aaKnown RBP28.17■■■□□ 2.1
CGREF1-204ENST00000402550 FAM92AA1XBS5 289 aa28.16■■■□□ 2.1
CGREF1-204ENST00000402550 NRG2O14511 850 aaPredicted RBP28.16■■■□□ 2.1
CGREF1-204ENST00000402550 PAPSS1O43252 624 aaPredicted RBP28.16■■■□□ 2.1
CGREF1-204ENST00000402550 USP17L7P0C7H9 530 aa28.16■■■□□ 2.1
CGREF1-204ENST00000402550 TMEM253P0C7T8 217 aa28.16■■■□□ 2.1
CGREF1-204ENST00000402550 GSCP56915 257 aaPredicted RBP28.16■■■□□ 2.1
CGREF1-204ENST00000402550 MRPS5P82675 430 aaKnown RBP28.16■■■□□ 2.1
CGREF1-204ENST00000402550 TAF10Q12962 218 aa28.16■■■□□ 2.1
CGREF1-204ENST00000402550 FAM183BPQ6ZVS7 135 aa28.16■■■□□ 2.1
CGREF1-204ENST00000402550 TMEM150AQ86TG1 271 aa28.16■■■□□ 2.1
CGREF1-204ENST00000402550 ITFG1Q8TB96 612 aa28.16■■■□□ 2.1
CGREF1-204ENST00000402550 SLITRK1Q96PX8 696 aa28.16■■■□□ 2.1
CGREF1-204ENST00000402550 PARVAQ9NVD7 372 aa28.16■■■□□ 2.1
CGREF1-204ENST00000402550 REXO2Q9Y3B8 237 aaKnown RBP28.16■■■□□ 2.1
CGREF1-204ENST00000402550 MOSPD3O75425 235 aa28.16■■■□□ 2.1
CGREF1-204ENST00000402550 GABBR2O75899 941 aa28.16■■■□□ 2.1
CGREF1-204ENST00000402550 FGF19O95750 216 aa28.16■■■□□ 2.1
CGREF1-204ENST00000402550 IL9P15248 144 aa28.16■■■□□ 2.1
CGREF1-204ENST00000402550 RRM1P23921 792 aa28.16■■■□□ 2.1
CGREF1-204ENST00000402550 DEKP35659 375 aaKnown RBP28.16■■■□□ 2.1
CGREF1-204ENST00000402550 DNAJC24Q6P3W2 148 aa28.16■■■□□ 2.1
CGREF1-204ENST00000402550 SCML4Q8N228 414 aa28.16■■■□□ 2.1
CGREF1-204ENST00000402550 C3orf20Q8ND61 904 aa28.16■■■□□ 2.1
CGREF1-204ENST00000402550 GOLGA1Q92805 767 aa28.16■■■□□ 2.1
CGREF1-204ENST00000402550 FBXO32Q969P5 355 aa28.16■■■□□ 2.1
CGREF1-204ENST00000402550 MRPL47Q9HD33 250 aaKnown RBP28.16■■■□□ 2.1
CGREF1-204ENST00000402550 MYO1AQ9UBC5 1043 aa28.16■■■□□ 2.1
CGREF1-204ENST00000402550 SCML2Q9UQR0 700 aa28.16■■■□□ 2.1
CGREF1-204ENST00000402550 SCINQ9Y6U3 715 aa28.16■■■□□ 2.1
CGREF1-204ENST00000402550 A0A1W2PRU2 124 aa28.15■■■□□ 2.1
CGREF1-204ENST00000402550 GOLGA8SH3BPF8 625 aa28.15■■■□□ 2.1
CGREF1-204ENST00000402550 GJA1P17302 382 aa28.15■■■□□ 2.1
CGREF1-204ENST00000402550 SLC6A3Q01959 620 aa28.15■■■□□ 2.1
CGREF1-204ENST00000402550 KIF5AQ12840 1032 aa28.15■■■□□ 2.1
CGREF1-204ENST00000402550 EFHC1Q5JVL4 640 aa28.15■■■□□ 2.1
CGREF1-204ENST00000402550 FAM102AQ5T9C2 384 aaPredicted RBP28.15■■■□□ 2.1
CGREF1-204ENST00000402550 PM20D1Q6GTS8 502 aa28.15■■■□□ 2.1
CGREF1-204ENST00000402550 SHKBP1Q8TBC3 707 aa28.15■■■□□ 2.1
CGREF1-204ENST00000402550 IRGQQ8WZA9 623 aa28.15■■■□□ 2.1
CGREF1-204ENST00000402550 SELENOOQ9BVL4 669 aa28.15■■■□□ 2.1
CGREF1-204ENST00000402550 ATXN3LQ9H3M9 355 aa28.15■■■□□ 2.1
CGREF1-204ENST00000402550 CHORDC1Q9UHD1 332 aaPredicted RBP28.15■■■□□ 2.1
CGREF1-204ENST00000402550 ZSCAN12O43309 604 aa28.14■■■□□ 2.1
CGREF1-204ENST00000402550 CDC25CP30307 473 aa28.14■■■□□ 2.1
CGREF1-204ENST00000402550 DAOAP59103 153 aa28.14■■■□□ 2.1
CGREF1-204ENST00000402550 OLFML1Q6UWY5 402 aa28.14■■■□□ 2.1
CGREF1-204ENST00000402550 PHLDB2Q86SQ0 1253 aa28.14■■■□□ 2.1
CGREF1-204ENST00000402550 MCRS1Q96EZ8 462 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms