RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 CLUHO75153 1309 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 H0YJX3 145 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 SLC22A2O15244 555 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 CCNKO75909 580 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 ZNF23P17027 643 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 ATP2B4P23634 1241 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 CCND2P30279 289 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 PHC1P78364 1004 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 ACAD10Q6JQN1 1059 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 TTC23LQ6PF05 361 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 PM20D2Q8IYS1 436 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 LARGE2Q8N3Y3 721 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 NCSTNQ92542 709 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 DNAJC1Q96KC8 554 aaKnown RBP10.3□□□□□ -0.76
PTPRM-203ENST00000400060 TCF12Q99081 682 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 TLE6Q9H808 572 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 ZDHHC7Q9NXF8 308 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 POLIQ9UNA4 740 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 TPRKBQ9Y3C4 175 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 LOC100653049A0A140TA62 436 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 FAM205CA6NFA0 338 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 DENRO43583 198 aaKnown RBP10.3□□□□□ -0.76
PTPRM-203ENST00000400060 KRT34O76011 436 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 ITIH1P19827 911 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 PSMA2P25787 234 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 DYNLT1P63172 113 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 DAB2P98082 770 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 ABCB5Q2M3G0 1257 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 ITPRIPL1Q6GPH6 555 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 RFWD3Q6PCD5 774 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 TMEM35BQ8NCS4 154 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 STARD8Q92502 1023 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 RORBQ92753 470 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 OXCT2Q9BYC2 517 aaPredicted RBP10.3□□□□□ -0.76
PTPRM-203ENST00000400060 OR2B2Q9GZK3 357 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 LRRC4BQ9NT99 713 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 GTSE1Q9NYZ3 720 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 ARMCX1Q9P291 453 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 ZBTB21Q9ULJ3 1066 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 MEI4A8MW99 385 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 HOXB6P17509 224 aaKnown RBP10.3□□□□□ -0.76
PTPRM-203ENST00000400060 RASA1P20936 1047 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 STIP1P31948 543 aaKnown RBP10.3□□□□□ -0.76
PTPRM-203ENST00000400060 NAMPTP43490 491 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 SLC1A6P48664 564 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 NME5P56597 212 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 KCNQ4P56696 695 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 ADGRE1Q14246 886 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 ACAP1Q15027 740 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 LPCAT4Q643R3 524 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 PACRGLQ8N7B6 248 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.3□□□□□ -0.76
PTPRM-203ENST00000400060 FBXO36Q8NEA4 188 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 SHCBP1Q8NEM2 672 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 BHLHE22Q8NFJ8 381 aaPredicted RBP10.3□□□□□ -0.76
PTPRM-203ENST00000400060 BDH2Q9BUT1 245 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 VTA1Q9NP79 307 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 DOLKQ9UPQ8 538 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 TMEM98Q9Y2Y6 226 aa10.3□□□□□ -0.76
PTPRM-203ENST00000400060 SPATA31D1Q6ZQQ2 1576 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 COX4I1P13073 169 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 DMP1Q13316 513 aaPredicted RBP10.29□□□□□ -0.76
PTPRM-203ENST00000400060 ACAP2Q15057 778 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 WDR72Q3MJ13 1102 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 ZC2HC1CQ53FD0 456 aaPredicted RBP10.29□□□□□ -0.76
PTPRM-203ENST00000400060 SPANXN2Q5MJ10 180 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 C6orf183Q5T699 404 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 GPR107Q5VW38 600 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 KLHL35Q6PF15 583 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 VSTM1Q6UX27 236 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 DHFR2Q86XF0 187 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 CCDC60Q8IWA6 550 aaPredicted RBP10.29□□□□□ -0.76
PTPRM-203ENST00000400060 ANKRD13AQ8IZ07 590 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 RBM15BQ8NDT2 890 aaKnown RBP10.29□□□□□ -0.76
PTPRM-203ENST00000400060 RMND5AQ9H871 391 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 AVENQ9NQS1 362 aaPredicted RBP10.29□□□□□ -0.76
PTPRM-203ENST00000400060 ZDHHC18Q9NUE0 388 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 CRNNQ9UBG3 495 aaPredicted RBP10.29□□□□□ -0.76
PTPRM-203ENST00000400060 WASF2Q9Y6W5 498 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 A0A087X0B3 334 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 PSMD12O00232 456 aaPredicted RBP10.29□□□□□ -0.76
PTPRM-203ENST00000400060 PRPSAP2O60256 369 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 SEC24AO95486 1093 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 CRKLP46109 303 aaKnown RBP10.29□□□□□ -0.76
PTPRM-203ENST00000400060 MARSP56192 900 aaKnown RBP10.29□□□□□ -0.76
PTPRM-203ENST00000400060 IL1RL1Q01638 556 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 NEDD8Q15843 81 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 UNC45BQ8IWX7 931 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 TRUB1Q8WWH5 349 aaKnown RBP10.29□□□□□ -0.76
PTPRM-203ENST00000400060 SRPK1Q96SB4 655 aaKnown RBP10.29□□□□□ -0.76
PTPRM-203ENST00000400060 EPB41L4AQ9HCS5 686 aaPredicted RBP10.29□□□□□ -0.76
PTPRM-203ENST00000400060 CDH22Q9UJ99 828 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 B3GNT3Q9Y2A9 372 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 FAM32AQ9Y421 112 aaKnown RBP10.29□□□□□ -0.76
PTPRM-203ENST00000400060 RPTORQ8N122 1335 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 CPS1P31327 1500 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 ESYT2A0FGR8 921 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 GSG1L2A8MUP6 293 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 RHOBTB1O94844 696 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 S100A9P06702 114 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms