RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 CREB5Q02930 508 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 FAM189A2Q15884 450 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 SLC9A4Q6AI14 798 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 FAM199XQ6PEV8 388 aaPredicted RBP8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 OTOAQ7RTW8 1153 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 FATE1Q969F0 183 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 ZNF333Q96JL9 665 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 MYRFLQ96LU7 910 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 TTC34A8MYJ7 566 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 IFNA4P05014 189 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 DBTP11182 482 aaKnown RBP8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 MXI1P50539 228 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 SLC15A2Q16348 729 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 MIIPQ5JXC2 388 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 AMIGO1Q86WK6 493 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 ZNF548Q8NEK5 533 aaPredicted RBP8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 RAPGEFL1Q9UHV5 662 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 ST3GAL5Q9UNP4 418 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 MYRFQ9Y2G1 1151 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 NAIPQ13075 1403 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 RLN2P04090 185 aa8.84□□□□□ -1
CACNA1C-220ENST00000399655 SLC26A3P40879 764 aa8.84□□□□□ -1
CACNA1C-220ENST00000399655 CLCN6P51797 869 aa8.84□□□□□ -1
CACNA1C-220ENST00000399655 DLG4P78352 724 aa8.84□□□□□ -1
CACNA1C-220ENST00000399655 ALG10BQ5I7T1 473 aa8.84□□□□□ -1
CACNA1C-220ENST00000399655 R3HCC1LQ7Z5L2 792 aaKnown RBP8.84□□□□□ -1
CACNA1C-220ENST00000399655 SAV1Q9H4B6 383 aaPredicted RBP8.84□□□□□ -1
CACNA1C-220ENST00000399655 EPB42P16452 691 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 PITRM1Q5JRX3 1037 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 ATAD3CQ5T2N8 411 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 ANKRD13AQ8IZ07 590 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 OR5T3Q8NGG3 340 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 SEPT9Q9UHD8 586 aaPredicted RBP8.83□□□□□ -1
CACNA1C-220ENST00000399655 IP6K2Q9UHH9 426 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 PEX16Q9Y5Y5 336 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 EIF4A3P38919 411 aaKnown RBP8.83□□□□□ -1
CACNA1C-220ENST00000399655 GSTM5P46439 218 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 CBX3Q13185 183 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 PROX1Q92786 737 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 PSMC3IPQ9P2W1 217 aaPredicted RBP8.83□□□□□ -1
CACNA1C-220ENST00000399655 ZNF219Q9P2Y4 722 aaPredicted RBP8.83□□□□□ -1
CACNA1C-220ENST00000399655 CD2BP2O95400 341 aaKnown RBP8.83□□□□□ -1
CACNA1C-220ENST00000399655 AGTP01019 485 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 VIL1P09327 827 aaKnown RBP8.83□□□□□ -1
CACNA1C-220ENST00000399655 AFF1P51825 1210 aaKnown RBP8.83□□□□□ -1
CACNA1C-220ENST00000399655 DNAAF1Q8NEP3 725 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 TOP1MTQ969P6 601 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 PIDD1Q9HB75 910 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 MIEF1Q9NQG6 463 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 GNPTGQ9UJJ9 305 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.83□□□□□ -1
CACNA1C-220ENST00000399655 ALG5Q9Y673 324 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 NARSO43776 548 aaKnown RBP8.83□□□□□ -1
CACNA1C-220ENST00000399655 LRRN2O75325 713 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 HLA-DQA2P01906 255 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 OGFRL1Q5TC84 451 aaPredicted RBP8.83□□□□□ -1
CACNA1C-220ENST00000399655 MSANTD2Q6P1R3 559 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 LINC00523Q86TU6 105 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 LRRC71Q8N4P6 559 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 ZNF655Q8N720 491 aaPredicted RBP8.83□□□□□ -1
CACNA1C-220ENST00000399655 RHPN1Q8TCX5 695 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 TMEM79Q9BSE2 394 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 VCPKMTQ9H867 229 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 LDHAP00338 332 aaKnown RBP8.83□□□□□ -1
CACNA1C-220ENST00000399655 B3GNT6Q6ZMB0 384 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 UGT2B28Q9BY64 529 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 KRT33AO76009 404 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 TOP3BO95985 862 aaKnown RBP8.83□□□□□ -1
CACNA1C-220ENST00000399655 HKDC1Q2TB90 917 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 PCID2Q5JVF3 399 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 TTC39BQ5VTQ0 682 aaPredicted RBP8.83□□□□□ -1
CACNA1C-220ENST00000399655 BRINP3Q76B58 766 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 KIAA1586Q9HCI6 787 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 CYP2D7A0A087X1C5 515 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 TSTD3H0UI37 97 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 OPLAHO14841 1288 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 PPP1R37O75864 691 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 TARSP26639 723 aaKnown RBP8.83□□□□□ -1
CACNA1C-220ENST00000399655 MAD2L1Q13257 205 aaPredicted RBP8.83□□□□□ -1
CACNA1C-220ENST00000399655 NAB1Q13506 487 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 BROXQ5VW32 411 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 NSMFQ6X4W1 530 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 SLC35F6Q8N357 371 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 MAGEC3Q8TD91 643 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 MED28Q9H204 178 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 MROH8Q9H579 483 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 PET100P0DJ07 73 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 GSPT1P15170 499 aaKnown RBP8.83□□□□□ -1
CACNA1C-220ENST00000399655 SDC4P31431 198 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 IL5RAQ01344 420 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 KRT31Q15323 416 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 IRGCQ6NXR0 463 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 CCDC3Q9BQI4 270 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 ERGIC3Q9Y282 383 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 MGAT4DA6NG13 374 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 GRM8O00222 908 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 RSL1D1O76021 490 aaKnown RBP8.83□□□□□ -1
CACNA1C-220ENST00000399655 DDX6P26196 483 aaKnown RBP eCLIP8.83□□□□□ -1
CACNA1C-220ENST00000399655 NUDT2P50583 147 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 CAMK2GQ13555 558 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms