RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 CCDC150Q8NCX0 1101 aa12.51□□□□□ -0.41
SMIM11A-201ENST00000399292 FAM3CQ92520 227 aa12.51□□□□□ -0.41
SMIM11A-201ENST00000399292 USP13Q92995 863 aaPredicted RBP12.51□□□□□ -0.41
SMIM11A-201ENST00000399292 EEF2KMTQ96G04 330 aa12.51□□□□□ -0.41
SMIM11A-201ENST00000399292 ZFYVE19Q96K21 471 aa12.51□□□□□ -0.41
SMIM11A-201ENST00000399292 B3GNT5Q9BYG0 378 aa12.51□□□□□ -0.41
SMIM11A-201ENST00000399292 SDCBP2Q9H190 292 aa12.51□□□□□ -0.41
SMIM11A-201ENST00000399292 C8orf33Q9H7E9 229 aaPredicted RBP12.51□□□□□ -0.41
SMIM11A-201ENST00000399292 MMRN2Q9H8L6 949 aa12.51□□□□□ -0.41
SMIM11A-201ENST00000399292 TMEM8AQ9HCN3 771 aa12.51□□□□□ -0.41
SMIM11A-201ENST00000399292 TRPC7Q9HCX4 862 aa12.51□□□□□ -0.41
SMIM11A-201ENST00000399292 CACNA1HO95180 2353 aa12.51□□□□□ -0.41
SMIM11A-201ENST00000399292 ZFHX2Q9C0A1 2572 aaPredicted RBP12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 TRAV19A0A0A6YYK7 116 aa12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 SHISA7A6NL88 538 aa12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 CLDN5O00501 218 aa12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 STX10O60499 249 aa12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 GADD45BO75293 160 aaPredicted RBP12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 CKMP06732 381 aa12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 HDCP19113 662 aa12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 TRIM21P19474 475 aaKnown RBP12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 CCNE1P24864 410 aa12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 TARSP26639 723 aaKnown RBP12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 RPS9P46781 194 aaKnown RBP12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 NDST1P52848 882 aa12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 NOP14P78316 857 aaKnown RBP12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 FKBP3Q00688 224 aaKnown RBP12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 STIM1Q13586 685 aa12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 ZNF268Q14587 947 aaPredicted RBP12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 KRT39Q6A163 491 aa12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 ANKRD40Q6AI12 368 aa12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 ISM2Q6H9L7 571 aa12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 SPOPLQ6IQ16 392 aa12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 CC2D1AQ6P1N0 951 aaPredicted RBP12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 UNC93AQ86WB7 457 aa12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 ADSSL1Q8N142 457 aa12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 NUP93Q8N1F7 819 aa12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 CRYBG2Q8N1P7 616 aa12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 TAS1R2Q8TE23 839 aa12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 CLDN23Q96B33 292 aa12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 MSANTD3Q96H12 275 aa12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 CYP2S1Q96SQ9 504 aa12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 MED10Q9BTT4 135 aa12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 ZNF518BQ9C0D4 1074 aa12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 KIF9Q9HAQ2 790 aa12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 GKN1Q9NS71 199 aa12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 SPATA6Q9NWH7 488 aaPredicted RBP12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 GTSE1Q9NYZ3 720 aa12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 TRPM5Q9NZQ8 1165 aa12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 NDRG2Q9UN36 371 aaKnown RBP12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 CCL26Q9Y258 94 aa12.5□□□□□ -0.41
SMIM11A-201ENST00000399292 ATP8B3O60423 1300 aa12.49□□□□□ -0.41
SMIM11A-201ENST00000399292 PROB1E7EW31 1015 aa12.49□□□□□ -0.41
SMIM11A-201ENST00000399292 TADA3O75528 432 aa12.49□□□□□ -0.41
SMIM11A-201ENST00000399292 USP17L7P0C7H9 530 aa12.49□□□□□ -0.41
SMIM11A-201ENST00000399292 PPP1R2P41236 205 aa12.49□□□□□ -0.41
SMIM11A-201ENST00000399292 NBL1P41271 181 aa12.49□□□□□ -0.41
SMIM11A-201ENST00000399292 ASPAP45381 313 aa12.49□□□□□ -0.41
SMIM11A-201ENST00000399292 PPP3CCP48454 512 aa12.49□□□□□ -0.41
SMIM11A-201ENST00000399292 PDE6CP51160 858 aa12.49□□□□□ -0.41
SMIM11A-201ENST00000399292 CENPCQ03188 943 aa12.49□□□□□ -0.41
SMIM11A-201ENST00000399292 LRRC63Q05C16 580 aa12.49□□□□□ -0.41
SMIM11A-201ENST00000399292 FZD5Q13467 585 aa12.49□□□□□ -0.41
SMIM11A-201ENST00000399292 ACOT1Q86TX2 421 aa12.49□□□□□ -0.41
SMIM11A-201ENST00000399292 ARL14EPQ8N8R7 260 aaPredicted RBP12.49□□□□□ -0.41
SMIM11A-201ENST00000399292 TTC8Q8TAM2 541 aa12.49□□□□□ -0.41
SMIM11A-201ENST00000399292 DHTKD1Q96HY7 919 aaPredicted RBP12.49□□□□□ -0.41
SMIM11A-201ENST00000399292 TTLL2Q9BWV7 592 aa12.49□□□□□ -0.41
SMIM11A-201ENST00000399292 NUCKS1Q9H1E3 243 aaKnown RBP12.49□□□□□ -0.41
SMIM11A-201ENST00000399292 LMAN1LQ9HAT1 526 aa12.49□□□□□ -0.41
SMIM11A-201ENST00000399292 CYP3A43Q9HB55 503 aa12.49□□□□□ -0.41
SMIM11A-201ENST00000399292 CHMP5Q9NZZ3 219 aa12.49□□□□□ -0.41
SMIM11A-201ENST00000399292 C2orf78A6NCI8 922 aa12.48□□□□□ -0.41
SMIM11A-201ENST00000399292 ZNF840PA6NDX5 716 aa12.48□□□□□ -0.41
SMIM11A-201ENST00000399292 PSMA7O14818 248 aa12.48□□□□□ -0.41
SMIM11A-201ENST00000399292 SLC16A3O15427 465 aaKnown RBP12.48□□□□□ -0.41
SMIM11A-201ENST00000399292 LAMTOR5O43504 91 aa12.48□□□□□ -0.41
SMIM11A-201ENST00000399292 RTN3O95197 1032 aaPredicted RBP12.48□□□□□ -0.41
SMIM11A-201ENST00000399292 ABL1P00519 1130 aa12.48□□□□□ -0.41
SMIM11A-201ENST00000399292 PFKLP17858 780 aa12.48□□□□□ -0.41
SMIM11A-201ENST00000399292 PMS1P54277 932 aaKnown RBP12.48□□□□□ -0.41
SMIM11A-201ENST00000399292 CACNA2D1P54289 1103 aa12.48□□□□□ -0.41
SMIM11A-201ENST00000399292 IFRD2Q12894 506 aaPredicted RBP12.48□□□□□ -0.41
SMIM11A-201ENST00000399292 RUNX3Q13761 415 aa12.48□□□□□ -0.41
SMIM11A-201ENST00000399292 ITPRIPL2Q3MIP1 535 aa12.48□□□□□ -0.41
SMIM11A-201ENST00000399292 PAQR9Q6ZVX9 377 aa12.48□□□□□ -0.41
SMIM11A-201ENST00000399292 FRMD5Q7Z6J6 570 aa12.48□□□□□ -0.41
SMIM11A-201ENST00000399292 RALGPS2Q86X27 583 aaPredicted RBP12.48□□□□□ -0.41
SMIM11A-201ENST00000399292 FBXL13Q8NEE6 735 aa12.48□□□□□ -0.41
SMIM11A-201ENST00000399292 SMARCD1Q96GM5 515 aa12.48□□□□□ -0.41
SMIM11A-201ENST00000399292 FAXDC2Q96IV6 333 aa12.48□□□□□ -0.41
SMIM11A-201ENST00000399292 SLITRK1Q96PX8 696 aa12.48□□□□□ -0.41
SMIM11A-201ENST00000399292 SLC22A12Q96S37 553 aa12.48□□□□□ -0.41
SMIM11A-201ENST00000399292 KCNK16Q96T55 309 aa12.48□□□□□ -0.41
SMIM11A-201ENST00000399292 FAM83CQ9BQN1 747 aa12.48□□□□□ -0.41
SMIM11A-201ENST00000399292 DNAI2Q9GZS0 605 aa12.48□□□□□ -0.41
SMIM11A-201ENST00000399292 APOBEC3GQ9HC16 384 aaKnown RBP12.48□□□□□ -0.41
SMIM11A-201ENST00000399292 RAB20Q9NX57 234 aa12.48□□□□□ -0.41
SMIM11A-201ENST00000399292 MAN1B1Q9UKM7 699 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms