RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 MAK16Q9BXY0 300 aaKnown RBP12.29□□□□□ -0.44
COL25A1-202ENST00000399127 SLC4A5Q9BY07 1137 aa12.29□□□□□ -0.44
COL25A1-202ENST00000399127 MAGEB5Q9BZ81 275 aa12.29□□□□□ -0.44
COL25A1-202ENST00000399127 ROPN1BQ9BZX4 212 aaPredicted RBP12.29□□□□□ -0.44
COL25A1-202ENST00000399127 ROPN1Q9HAT0 212 aaPredicted RBP12.29□□□□□ -0.44
COL25A1-202ENST00000399127 PCDH9Q9HC56 1237 aa12.29□□□□□ -0.44
COL25A1-202ENST00000399127 ATP2C2O75185 946 aa12.28□□□□□ -0.44
COL25A1-202ENST00000399127 COQ9O75208 318 aa12.28□□□□□ -0.44
COL25A1-202ENST00000399127 CYBAP13498 195 aa12.28□□□□□ -0.44
COL25A1-202ENST00000399127 ACAT1P24752 427 aaKnown RBP12.28□□□□□ -0.44
COL25A1-202ENST00000399127 SDC4P31431 198 aa12.28□□□□□ -0.44
COL25A1-202ENST00000399127 PCK1P35558 622 aa12.28□□□□□ -0.44
COL25A1-202ENST00000399127 IRF5Q13568 498 aa12.28□□□□□ -0.44
COL25A1-202ENST00000399127 DPYSL3Q14195 570 aa12.28□□□□□ -0.44
COL25A1-202ENST00000399127 KRT81Q14533 505 aa12.28□□□□□ -0.44
COL25A1-202ENST00000399127 STILQ15468 1287 aa12.28□□□□□ -0.44
COL25A1-202ENST00000399127 TNFAIP8L3Q5GJ75 292 aa12.28□□□□□ -0.44
COL25A1-202ENST00000399127 PPP6R3Q5H9R7 873 aaPredicted RBP12.28□□□□□ -0.44
COL25A1-202ENST00000399127 ERMARDQ5T6L9 678 aa12.28□□□□□ -0.44
COL25A1-202ENST00000399127 CCDC13Q8IYE1 715 aa12.28□□□□□ -0.44
COL25A1-202ENST00000399127 NDRG1Q92597 394 aaKnown RBP12.28□□□□□ -0.44
COL25A1-202ENST00000399127 SERPINB12Q96P63 405 aa12.28□□□□□ -0.44
COL25A1-202ENST00000399127 STMN4Q9H169 189 aaPredicted RBP12.28□□□□□ -0.44
COL25A1-202ENST00000399127 SNX25Q9H3E2 840 aa12.28□□□□□ -0.44
COL25A1-202ENST00000399127 RSAD1Q9HA92 442 aa12.28□□□□□ -0.44
COL25A1-202ENST00000399127 INTS9Q9NV88 658 aaKnown RBP12.28□□□□□ -0.44
COL25A1-202ENST00000399127 Q9Y3F1 56 aa12.28□□□□□ -0.44
COL25A1-202ENST00000399127 HEY1Q9Y5J3 304 aa12.28□□□□□ -0.44
COL25A1-202ENST00000399127 TCRBV7S3A2A0A539 114 aa12.28□□□□□ -0.44
COL25A1-202ENST00000399127 APOC4-APOC2K7ER74 178 aa12.28□□□□□ -0.44
COL25A1-202ENST00000399127 MCF2LO15068 1137 aa12.28□□□□□ -0.44
COL25A1-202ENST00000399127 DUSP11O75319 330 aaKnown RBP12.28□□□□□ -0.44
COL25A1-202ENST00000399127 APOC2P02655 101 aa12.28□□□□□ -0.44
COL25A1-202ENST00000399127 RPL22P35268 128 aaKnown RBP12.28□□□□□ -0.44
COL25A1-202ENST00000399127 AFF1P51825 1210 aaKnown RBP12.28□□□□□ -0.44
COL25A1-202ENST00000399127 CRYBB1P53674 252 aaPredicted RBP12.28□□□□□ -0.44
COL25A1-202ENST00000399127 CACNB2Q08289 660 aaPredicted RBP12.28□□□□□ -0.44
COL25A1-202ENST00000399127 PDIA2Q13087 525 aaKnown RBP12.28□□□□□ -0.44
COL25A1-202ENST00000399127 CROCCP2Q86T23 111 aa12.28□□□□□ -0.44
COL25A1-202ENST00000399127 TMEM110Q86TL2 294 aa12.28□□□□□ -0.44
COL25A1-202ENST00000399127 FAM228AQ86W67 206 aa12.28□□□□□ -0.44
COL25A1-202ENST00000399127 CCDC33Q8N5R6 958 aa12.28□□□□□ -0.44
COL25A1-202ENST00000399127 APPL2Q8NEU8 664 aa12.28□□□□□ -0.44
COL25A1-202ENST00000399127 ATXN2LQ8WWM7 1075 aaKnown RBP12.28□□□□□ -0.44
COL25A1-202ENST00000399127 PRCCQ92733 491 aaPredicted RBP12.28□□□□□ -0.44
COL25A1-202ENST00000399127 VPS37BQ9H9H4 285 aa12.28□□□□□ -0.44
COL25A1-202ENST00000399127 KCNK9Q9NPC2 374 aa12.28□□□□□ -0.44
COL25A1-202ENST00000399127 EFR3BQ9Y2G0 817 aa12.28□□□□□ -0.44
COL25A1-202ENST00000399127 CD4P01730 458 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 RARBP10826 455 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 CCND3P30281 292 aaPredicted RBP12.27□□□□□ -0.45
COL25A1-202ENST00000399127 TAF6P49848 677 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 MORF4L2Q15014 288 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 ACAP1Q15027 740 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 FAM47CQ5HY64 1035 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 DARS2Q6PI48 645 aaKnown RBP12.27□□□□□ -0.45
COL25A1-202ENST00000399127 TAOK1Q7L7X3 1001 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 CPLX4Q7Z7G2 160 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 SRRM1Q8IYB3 904 aaKnown RBP12.27□□□□□ -0.45
COL25A1-202ENST00000399127 ANKRD42Q8N9B4 389 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 TTC13Q8NBP0 860 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.27□□□□□ -0.45
COL25A1-202ENST00000399127 CPT1BQ92523 772 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 WNT8BQ93098 351 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 SPC25Q9HBM1 224 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 NAALADL1Q9UQQ1 740 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 CAPN7Q9Y6W3 813 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 EXOC1LA0A1B0GW35 172 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 TMEM120BA0PK00 339 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 POC1B-GALNT4F8VUJ3 575 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 IGHA2P01877 340 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 PRKAR2AP13861 404 aaKnown RBP12.27□□□□□ -0.45
COL25A1-202ENST00000399127 YY1P25490 414 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 TKTP29401 623 aaKnown RBP12.27□□□□□ -0.45
COL25A1-202ENST00000399127 AXLP30530 894 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 GCKP35557 465 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 RABGGTBP53611 331 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 LILRA4P59901 499 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 BASP1P80723 227 aaKnown RBP12.27□□□□□ -0.45
COL25A1-202ENST00000399127 TMED2Q15363 201 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 PCBP1Q15365 356 aaKnown RBP eCLIP12.27□□□□□ -0.45
COL25A1-202ENST00000399127 MSS51Q4VC12 460 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 TAX1BP1Q86VP1 789 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 UNC93AQ86WB7 457 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 ADGRF2Q8IZF7 708 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 MICAL1Q8TDZ2 1067 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 P3H4Q92791 437 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 SNRNP25Q9BV90 132 aaKnown RBP12.27□□□□□ -0.45
COL25A1-202ENST00000399127 KATNAL1Q9BW62 490 aa12.27□□□□□ -0.45
COL25A1-202ENST00000399127 DDX20Q9UHI6 824 aaKnown RBP12.27□□□□□ -0.45
COL25A1-202ENST00000399127 CLDN5O00501 218 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 PTGESO14684 152 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 HUS1O60921 280 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 SKAP2O75563 359 aaPredicted RBP12.26□□□□□ -0.45
COL25A1-202ENST00000399127 IL4RP24394 825 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 VEGFBP49765 207 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 CLNS1AP54105 237 aaKnown RBP12.26□□□□□ -0.45
COL25A1-202ENST00000399127 HDAC4P56524 1084 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 BST2Q10589 180 aaKnown RBP12.26□□□□□ -0.45
COL25A1-202ENST00000399127 MTA1Q13330 715 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms