RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 ZNF197O14709 1029 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 GRAP2O75791 330 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 ERBB2P04626 1255 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 CCDC175P0C221 793 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 KRT3P12035 628 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 POU3F3P20264 500 aaPredicted RBP9.37□□□□□ -0.91
BRCC3-206ENST00000399042 MMP8P22894 467 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 GABRR2P28476 465 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 CDC25CP30307 473 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 CDH5P33151 784 aaPredicted RBP9.37□□□□□ -0.91
BRCC3-206ENST00000399042 GALCP54803 685 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 YWHAGP61981 247 aaKnown RBP eCLIP9.37□□□□□ -0.91
BRCC3-206ENST00000399042 MRPS5P82675 430 aaKnown RBP9.37□□□□□ -0.91
BRCC3-206ENST00000399042 SLC6A3Q01959 620 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 KIF5AQ12840 1032 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 ADAM15Q13444 863 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 ZNF268Q14587 947 aaPredicted RBP9.37□□□□□ -0.91
BRCC3-206ENST00000399042 PTPN20Q4JDL3 420 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 PKDCCQ504Y2 493 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 RAD9BQ6WBX8 426 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 FAM183BPQ6ZVS7 135 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 GPRIN1Q7Z2K8 1008 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 GRASPQ7Z6J2 395 aaPredicted RBP9.37□□□□□ -0.91
BRCC3-206ENST00000399042 TMEM110Q86TL2 294 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 MON1AQ86VX9 555 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 DNAAF5Q86Y56 855 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 PHF13Q86YI8 300 aaPredicted RBP9.37□□□□□ -0.91
BRCC3-206ENST00000399042 WDTC1Q8N5D0 677 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 LEMD2Q8NC56 503 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 ACRBPQ8NEB7 543 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 ZMIZ2Q8NF64 920 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 VCPIP1Q96JH7 1222 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 RIPOR3Q96MK2 946 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 SLC4A5Q9BY07 1137 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 TMEM30AQ9NV96 361 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 GMIPQ9P107 970 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 CYTH4Q9UIA0 394 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 SCML2Q9UQR0 700 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 MRPS23Q9Y3D9 190 aaKnown RBP9.37□□□□□ -0.91
BRCC3-206ENST00000399042 KIAA1671Q9BY89 1806 aa9.37□□□□□ -0.91
BRCC3-206ENST00000399042 NLRC5Q86WI3 1866 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 SYNJ2BP-COX16A0A087WUM0 186 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 A0A1W2PQH9 124 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 HHLA1C9JL84 531 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 PAPSS1O43252 624 aaPredicted RBP9.36□□□□□ -0.91
BRCC3-206ENST00000399042 CCP110O43303 1012 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 ZSCAN12O43309 604 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 HSF2BPO75031 334 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 RHOP08100 348 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 NCAM1P13591 858 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 KCNA5P22460 613 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 RRM1P23921 792 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 HOXA9P31269 272 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 SSR1P43307 286 aaKnown RBP9.36□□□□□ -0.91
BRCC3-206ENST00000399042 PPP3CCP48454 512 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 USP46P62068 366 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 YWHAZP63104 245 aaKnown RBP9.36□□□□□ -0.91
BRCC3-206ENST00000399042 ITIH3Q06033 890 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 ARHGAP29Q52LW3 1261 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 C10orf120Q5SQS8 335 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 HECTD3Q5T447 861 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 XYLT1Q86Y38 959 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 VN1R2Q8NFZ6 395 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 CLEC4CQ8WTT0 213 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 IRGQQ8WZA9 623 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 NDRG1Q92597 394 aaKnown RBP9.36□□□□□ -0.91
BRCC3-206ENST00000399042 EDEM1Q92611 657 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 RNF34Q969K3 372 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 PABPC5Q96DU9 382 aaKnown RBP9.36□□□□□ -0.91
BRCC3-206ENST00000399042 CDK5RAP1Q96SZ6 601 aaKnown RBP9.36□□□□□ -0.91
BRCC3-206ENST00000399042 SYT11Q9BT88 431 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 NUP85Q9BW27 656 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 KRTAP3-3Q9BYR6 98 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 KRTAP3-2Q9BYR7 98 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 THAP2Q9H0W7 228 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 ISCUQ9H1K1 167 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 METTL5Q9NRN9 209 aaKnown RBP9.36□□□□□ -0.91
BRCC3-206ENST00000399042 HCFC1R1Q9NWW0 138 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 MTMR10Q9NXD2 777 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 COX16Q9P0S2 106 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 MYO7AQ13402 2215 aa9.36□□□□□ -0.91
BRCC3-206ENST00000399042 A0A1W2PRU2 124 aa9.35□□□□□ -0.91
BRCC3-206ENST00000399042 YJEFN3A6XGL0 299 aa9.35□□□□□ -0.91
BRCC3-206ENST00000399042 TMEM110-MUSTN1A8MSY1 372 aa9.35□□□□□ -0.91
BRCC3-206ENST00000399042 E7ENQ6 273 aa9.35□□□□□ -0.91
BRCC3-206ENST00000399042 H3BQ06 376 aaPredicted RBP9.35□□□□□ -0.91
BRCC3-206ENST00000399042 TNFRSF10BO14763 440 aa9.35□□□□□ -0.91
BRCC3-206ENST00000399042 KRT86O43790 486 aa9.35□□□□□ -0.91
BRCC3-206ENST00000399042 LTFP02788 710 aa9.35□□□□□ -0.91
BRCC3-206ENST00000399042 TMEM253P0C7T8 217 aa9.35□□□□□ -0.91
BRCC3-206ENST00000399042 RARGP13631 454 aa9.35□□□□□ -0.91
BRCC3-206ENST00000399042 PDGFRAP16234 1089 aa9.35□□□□□ -0.91
BRCC3-206ENST00000399042 FSHRP23945 695 aa9.35□□□□□ -0.91
BRCC3-206ENST00000399042 GBP1P32455 592 aa9.35□□□□□ -0.91
BRCC3-206ENST00000399042 MTHFRP42898 656 aa9.35□□□□□ -0.91
BRCC3-206ENST00000399042 GABRB2P47870 512 aa9.35□□□□□ -0.91
BRCC3-206ENST00000399042 DAOAP59103 153 aa9.35□□□□□ -0.91
BRCC3-206ENST00000399042 NTHL1P78549 312 aa9.35□□□□□ -0.91
BRCC3-206ENST00000399042 CCZ1BP86790 482 aa9.35□□□□□ -0.91
BRCC3-206ENST00000399042 CCZ1P86791 482 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms