RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 TBC1D3BA6NDS4 549 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 C4orf47A7E2U8 309 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 SGK1O00141 431 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 TNFRSF10BO14763 440 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 VNN1O95497 513 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 C4BPAP04003 597 aaKnown RBP11.78□□□□□ -0.52
SRMP1-201ENST00000398959 SLFN14P0C7P3 912 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 CCDC130P13994 396 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 PMLP29590 882 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 TUBP50607 506 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 CLDN10P78369 228 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 STK4Q13043 487 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 ORC1Q13415 861 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 SGSM1Q2NKQ1 1148 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 ANO4Q32M45 955 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 EMC10Q5UCC4 262 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 SNX30Q5VWJ9 437 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 DAB2IPQ5VWQ8 1189 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 ATL3Q6DD88 541 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 PSAPL1Q6NUJ1 521 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 NUDT18Q6ZVK8 323 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 PAQR9Q6ZVX9 377 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 FUKQ8N0W3 1084 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 NAT16Q8N8M0 369 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 KIAA0895Q8NCT3 520 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 HMGB4Q8WW32 186 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 RLN3Q8WXF3 142 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 PIGKQ92643 395 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 ZFRQ96KR1 1074 aaKnown RBP11.78□□□□□ -0.52
SRMP1-201ENST00000398959 SDCBP2Q9H190 292 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 FBXO44Q9H4M3 255 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 ZDHHC4Q9NPG8 344 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 TMEM9BQ9NQ34 198 aa11.78□□□□□ -0.52
SRMP1-201ENST00000398959 A0A0A0MRY4 1105 aa11.77□□□□□ -0.53
SRMP1-201ENST00000398959 TCRBV21S2A2A0A5A6 115 aa11.77□□□□□ -0.53
SRMP1-201ENST00000398959 PATE3B3GLJ2 98 aa11.77□□□□□ -0.53
SRMP1-201ENST00000398959 ACTN4O43707 911 aaKnown RBP11.77□□□□□ -0.53
SRMP1-201ENST00000398959 KLRC4O43908 158 aa11.77□□□□□ -0.53
SRMP1-201ENST00000398959 NR3C1P04150 777 aa11.77□□□□□ -0.53
SRMP1-201ENST00000398959 RPN1P04843 607 aaKnown RBP11.77□□□□□ -0.53
SRMP1-201ENST00000398959 HNRNPLP14866 589 aaKnown RBP eCLIP11.77□□□□□ -0.53
SRMP1-201ENST00000398959 PIK3CAP42336 1068 aa11.77□□□□□ -0.53
SRMP1-201ENST00000398959 KIR2DL1P43626 348 aaPredicted RBP11.77□□□□□ -0.53
SRMP1-201ENST00000398959 NOVA1P51513 510 aaKnown RBP11.77□□□□□ -0.53
SRMP1-201ENST00000398959 NDST1P52848 882 aa11.77□□□□□ -0.53
SRMP1-201ENST00000398959 MAP3K7CLP57077 242 aa11.77□□□□□ -0.53
SRMP1-201ENST00000398959 DLG4P78352 724 aa11.77□□□□□ -0.53
SRMP1-201ENST00000398959 DNM1Q05193 864 aaKnown RBP11.77□□□□□ -0.53
SRMP1-201ENST00000398959 BYSLQ13895 437 aaKnown RBP11.77□□□□□ -0.53
SRMP1-201ENST00000398959 KMT5BQ4FZB7 885 aa11.77□□□□□ -0.53
SRMP1-201ENST00000398959 CEP135Q66GS9 1140 aa11.77□□□□□ -0.53
SRMP1-201ENST00000398959 LPCAT2Q7L5N7 544 aa11.77□□□□□ -0.53
SRMP1-201ENST00000398959 TRMT11Q7Z4G4 463 aaKnown RBP11.77□□□□□ -0.53
SRMP1-201ENST00000398959 SLC9A9Q8IVB4 645 aa11.77□□□□□ -0.53
SRMP1-201ENST00000398959 BBS7Q8IWZ6 715 aa11.77□□□□□ -0.53
SRMP1-201ENST00000398959 ZNF513Q8N8E2 541 aaPredicted RBP11.77□□□□□ -0.53
SRMP1-201ENST00000398959 OLIG1Q8TAK6 271 aa11.77□□□□□ -0.53
SRMP1-201ENST00000398959 SLC2A14Q8TDB8 520 aa11.77□□□□□ -0.53
SRMP1-201ENST00000398959 TAF4BQ92750 862 aa11.77□□□□□ -0.53
SRMP1-201ENST00000398959 PAGE5Q96GU1 130 aa11.77□□□□□ -0.53
SRMP1-201ENST00000398959 SMOQ99835 787 aa11.77□□□□□ -0.53
SRMP1-201ENST00000398959 TLR8Q9NR97 1041 aaKnown RBP11.77□□□□□ -0.53
SRMP1-201ENST00000398959 SPHK2Q9NRA0 654 aa11.77□□□□□ -0.53
SRMP1-201ENST00000398959 FAM49BQ9NUQ9 324 aa11.77□□□□□ -0.53
SRMP1-201ENST00000398959 DMAC2Q9NW81 257 aa11.77□□□□□ -0.53
SRMP1-201ENST00000398959 IL37Q9NZH6 218 aa11.77□□□□□ -0.53
SRMP1-201ENST00000398959 DEC1Q9P2X7 70 aa11.77□□□□□ -0.53
SRMP1-201ENST00000398959 FRMD4BQ9Y2L6 1034 aa11.77□□□□□ -0.53
SRMP1-201ENST00000398959 PCNX2A6NKB5 2137 aa11.77□□□□□ -0.53
SRMP1-201ENST00000398959 USP24Q9UPU5 2620 aa11.76□□□□□ -0.53
SRMP1-201ENST00000398959 TP53BP1Q12888 1972 aaPredicted RBP11.76□□□□□ -0.53
SRMP1-201ENST00000398959 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.76□□□□□ -0.53
SRMP1-201ENST00000398959 FAM92AA1XBS5 289 aa11.76□□□□□ -0.53
SRMP1-201ENST00000398959 PDXKO00764 312 aa11.76□□□□□ -0.53
SRMP1-201ENST00000398959 HOXC11O43248 304 aaPredicted RBP11.76□□□□□ -0.53
SRMP1-201ENST00000398959 CALUO43852 315 aaPredicted RBP11.76□□□□□ -0.53
SRMP1-201ENST00000398959 TLR5O60602 858 aa11.76□□□□□ -0.53
SRMP1-201ENST00000398959 ADAM23O75077 832 aa11.76□□□□□ -0.53
SRMP1-201ENST00000398959 TULP3O75386 442 aa11.76□□□□□ -0.53
SRMP1-201ENST00000398959 BEST1O76090 585 aa11.76□□□□□ -0.53
SRMP1-201ENST00000398959 ZDHHC11BP0C7U3 371 aa11.76□□□□□ -0.53
SRMP1-201ENST00000398959 FAM200BP0CF97 657 aa11.76□□□□□ -0.53
SRMP1-201ENST00000398959 ADORA2BP29275 332 aa11.76□□□□□ -0.53
SRMP1-201ENST00000398959 P2RY2P41231 377 aa11.76□□□□□ -0.53
SRMP1-201ENST00000398959 SHC2P98077 582 aa11.76□□□□□ -0.53
SRMP1-201ENST00000398959 GOLGA8FQ08AF8 430 aa11.76□□□□□ -0.53
SRMP1-201ENST00000398959 GOLGA8DPQ0D2H9 430 aa11.76□□□□□ -0.53
SRMP1-201ENST00000398959 ZACNQ401N2 412 aa11.76□□□□□ -0.53
SRMP1-201ENST00000398959 C10orf76Q5T2E6 689 aa11.76□□□□□ -0.53
SRMP1-201ENST00000398959 SPOPLQ6IQ16 392 aa11.76□□□□□ -0.53
SRMP1-201ENST00000398959 ARMCX6Q7L4S7 300 aa11.76□□□□□ -0.53
SRMP1-201ENST00000398959 UNC93AQ86WB7 457 aa11.76□□□□□ -0.53
SRMP1-201ENST00000398959 TMEFF1Q8IYR6 380 aa11.76□□□□□ -0.53
SRMP1-201ENST00000398959 PHTF2Q8N3S3 785 aa11.76□□□□□ -0.53
SRMP1-201ENST00000398959 C12orf29Q8N999 325 aa11.76□□□□□ -0.53
SRMP1-201ENST00000398959 SPRYD3Q8NCJ5 442 aa11.76□□□□□ -0.53
SRMP1-201ENST00000398959 ZMIZ2Q8NF64 920 aa11.76□□□□□ -0.53
SRMP1-201ENST00000398959 TMC2Q8TDI7 906 aa11.76□□□□□ -0.53
SRMP1-201ENST00000398959 JAKMIP2Q96AA8 810 aa11.76□□□□□ -0.53
SRMP1-201ENST00000398959 IMPG2Q9BZV3 1241 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms