RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 ADGRD1Q6QNK2 874 aa14.43□□□□□ -0.1
PRAME-202ENST00000398743 ALKAL1Q6UXT8 129 aa14.43□□□□□ -0.1
PRAME-202ENST00000398743 GBP7Q8N8V2 638 aaPredicted RBP14.43□□□□□ -0.1
PRAME-202ENST00000398743 KHSRPQ92945 711 aaKnown RBP eCLIP14.43□□□□□ -0.1
PRAME-202ENST00000398743 ZNF670Q9BS34 389 aa14.43□□□□□ -0.1
PRAME-202ENST00000398743 DHRS4Q9BTZ2 278 aa14.43□□□□□ -0.1
PRAME-202ENST00000398743 SNRNP25Q9BV90 132 aaKnown RBP14.43□□□□□ -0.1
PRAME-202ENST00000398743 PITPNM3Q9BZ71 974 aa14.43□□□□□ -0.1
PRAME-202ENST00000398743 PCDH18Q9HCL0 1135 aa14.43□□□□□ -0.1
PRAME-202ENST00000398743 SSU72Q9NP77 194 aaKnown RBP14.43□□□□□ -0.1
PRAME-202ENST00000398743 KLC4Q9NSK0 619 aa14.43□□□□□ -0.1
PRAME-202ENST00000398743 HAUS2Q9NVX0 235 aa14.43□□□□□ -0.1
PRAME-202ENST00000398743 GPATCH2LQ9NWQ4 482 aa14.43□□□□□ -0.1
PRAME-202ENST00000398743 SLC5A4Q9NY91 659 aa14.43□□□□□ -0.1
PRAME-202ENST00000398743 PAK5Q9P286 719 aa14.43□□□□□ -0.1
PRAME-202ENST00000398743 CITO14578 2027 aa14.43□□□□□ -0.1
PRAME-202ENST00000398743 PCNTO95613 3336 aa14.43□□□□□ -0.1
PRAME-202ENST00000398743 A0A1W2PPM1 405 aa14.43□□□□□ -0.1
PRAME-202ENST00000398743 MBLAC1A4D2B0 266 aaPredicted RBP14.43□□□□□ -0.1
PRAME-202ENST00000398743 CFAP69A5D8W1 941 aa14.43□□□□□ -0.1
PRAME-202ENST00000398743 CHADO15335 359 aa14.43□□□□□ -0.1
PRAME-202ENST00000398743 TYROBPO43914 113 aa14.43□□□□□ -0.1
PRAME-202ENST00000398743 GBP2P32456 591 aaPredicted RBP14.43□□□□□ -0.1
PRAME-202ENST00000398743 RPA3P35244 121 aaPredicted RBP14.43□□□□□ -0.1
PRAME-202ENST00000398743 KCNJ11Q14654 390 aa14.43□□□□□ -0.1
PRAME-202ENST00000398743 FAM133BQ5BKY9 247 aaKnown RBP14.43□□□□□ -0.1
PRAME-202ENST00000398743 FBXO47Q5MNV8 452 aa14.43□□□□□ -0.1
PRAME-202ENST00000398743 SLC9A4Q6AI14 798 aa14.43□□□□□ -0.1
PRAME-202ENST00000398743 CGB2Q6NT52 195 aa14.43□□□□□ -0.1
PRAME-202ENST00000398743 SUGP1Q8IWZ8 645 aaKnown RBP14.43□□□□□ -0.1
PRAME-202ENST00000398743 FUKQ8N0W3 1084 aa14.43□□□□□ -0.1
PRAME-202ENST00000398743 C7orf31Q8N865 590 aa14.43□□□□□ -0.1
PRAME-202ENST00000398743 FAF2Q96CS3 445 aa14.43□□□□□ -0.1
PRAME-202ENST00000398743 APOL6Q9BWW8 343 aa14.43□□□□□ -0.1
PRAME-202ENST00000398743 DPEP3Q9H4B8 488 aa14.43□□□□□ -0.1
PRAME-202ENST00000398743 PRKAG3Q9UGI9 489 aa14.43□□□□□ -0.1
PRAME-202ENST00000398743 CHMP2BQ9UQN3 213 aa14.43□□□□□ -0.1
PRAME-202ENST00000398743 HEY1Q9Y5J3 304 aa14.43□□□□□ -0.1
PRAME-202ENST00000398743 RALGAPA2Q2PPJ7 1873 aa14.43□□□□□ -0.1
PRAME-202ENST00000398743 SLC15A5A6NIM6 579 aa14.42□□□□□ -0.1
PRAME-202ENST00000398743 KCNN4O15554 427 aa14.42□□□□□ -0.1
PRAME-202ENST00000398743 CD4P01730 458 aa14.42□□□□□ -0.1
PRAME-202ENST00000398743 KRT4P19013 534 aa14.42□□□□□ -0.1
PRAME-202ENST00000398743 AKAP5P24588 427 aa14.42□□□□□ -0.1
PRAME-202ENST00000398743 AXLP30530 894 aa14.42□□□□□ -0.1
PRAME-202ENST00000398743 MSH2P43246 934 aa14.42□□□□□ -0.1
PRAME-202ENST00000398743 BCAT1P54687 386 aa14.42□□□□□ -0.1
PRAME-202ENST00000398743 HDAC4P56524 1084 aa14.42□□□□□ -0.1
PRAME-202ENST00000398743 BST2Q10589 180 aaKnown RBP14.42□□□□□ -0.1
PRAME-202ENST00000398743 PQLC3Q8N755 202 aa14.42□□□□□ -0.1
PRAME-202ENST00000398743 PCDH19Q8TAB3 1148 aa14.42□□□□□ -0.1
PRAME-202ENST00000398743 RTP4Q96DX8 246 aa14.42□□□□□ -0.1
PRAME-202ENST00000398743 ZNF560Q96MR9 790 aa14.42□□□□□ -0.1
PRAME-202ENST00000398743 B3GNT5Q9BYG0 378 aa14.42□□□□□ -0.1
PRAME-202ENST00000398743 ADAM33Q9BZ11 813 aa14.42□□□□□ -0.1
PRAME-202ENST00000398743 USP29Q9HBJ7 922 aa14.42□□□□□ -0.1
PRAME-202ENST00000398743 KLHL14Q9P2G3 628 aa14.42□□□□□ -0.1
PRAME-202ENST00000398743 PIN4Q9Y237 131 aaKnown RBP14.42□□□□□ -0.1
PRAME-202ENST00000398743 SCN4AP35499 1836 aa14.42□□□□□ -0.1
PRAME-202ENST00000398743 ZBED1O96006 694 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 ELK3P41970 407 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 PTPN9P43378 593 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 PDK4Q16654 411 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 CA9Q16790 459 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 CYB5D1Q6P9G0 228 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 RGS9BPQ6ZS82 235 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 FAM47EQ6ZV65 393 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 ANKRD52Q8NB46 1076 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 PPP1R13LQ8WUF5 828 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 CYTH2Q99418 400 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 RAB6BQ9NRW1 208 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 GGT7Q9UJ14 662 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 BCLAF3A2AJT9 711 aaKnown RBP14.41□□□□□ -0.1
PRAME-202ENST00000398743 KPNA7A9QM74 516 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 ZNF487B1APH4 448 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 PIRO00625 290 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 XPOTO43592 962 aaKnown RBP14.41□□□□□ -0.1
PRAME-202ENST00000398743 GABBR2O75899 941 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 UBOX5O94941 541 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 ZWINTO95229 277 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 CCDC130P13994 396 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 RBL1P28749 1068 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 ADORA2BP29275 332 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 FKBP1BP68106 108 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 DNAJC3Q13217 504 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 MFSD10Q14728 455 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 PPP6R3Q5H9R7 873 aaPredicted RBP14.41□□□□□ -0.1
PRAME-202ENST00000398743 KBTBD7Q8WVZ9 684 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 LPIN3Q9BQK8 851 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 FRMD8Q9BZ67 464 aaPredicted RBP14.41□□□□□ -0.1
PRAME-202ENST00000398743 DNAI2Q9GZS0 605 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 RNF19AQ9NV58 838 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 GJD2Q9UKL4 321 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 GNEQ9Y223 722 aaKnown RBP14.41□□□□□ -0.1
PRAME-202ENST00000398743 STARD13Q9Y3M8 1113 aa14.41□□□□□ -0.1
PRAME-202ENST00000398743 SMIM28A0A1B0GU29 152 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 KBTBD13C9JR72 458 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 HCRTO43612 131 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 SPAG6O75602 509 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 PIAS1O75925 651 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms