RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 TTC39CQ8N584 583 aa14.19□□□□□ -0.14
VCX3A-202ENST00000398729 FBXL13Q8NEE6 735 aa14.19□□□□□ -0.14
VCX3A-202ENST00000398729 ZMIZ2Q8NF64 920 aa14.19□□□□□ -0.14
VCX3A-202ENST00000398729 CD101Q93033 1021 aa14.19□□□□□ -0.14
VCX3A-202ENST00000398729 CYFIP2Q96F07 1278 aa14.19□□□□□ -0.14
VCX3A-202ENST00000398729 TWNKQ96RR1 684 aa14.19□□□□□ -0.14
VCX3A-202ENST00000398729 HNRNPABQ99729 332 aaKnown RBP14.19□□□□□ -0.14
VCX3A-202ENST00000398729 SMOQ99835 787 aa14.19□□□□□ -0.14
VCX3A-202ENST00000398729 LINC00597Q9H2U6 94 aa14.19□□□□□ -0.14
VCX3A-202ENST00000398729 FBXO44Q9H4M3 255 aa14.19□□□□□ -0.14
VCX3A-202ENST00000398729 RAB20Q9NX57 234 aa14.19□□□□□ -0.14
VCX3A-202ENST00000398729 FAM92AA1XBS5 289 aa14.18□□□□□ -0.14
VCX3A-202ENST00000398729 PSMA7O14818 248 aa14.18□□□□□ -0.14
VCX3A-202ENST00000398729 COCHO43405 550 aa14.18□□□□□ -0.14
VCX3A-202ENST00000398729 CILPO75339 1184 aa14.18□□□□□ -0.14
VCX3A-202ENST00000398729 BEST1O76090 585 aa14.18□□□□□ -0.14
VCX3A-202ENST00000398729 EGFP01133 1207 aa14.18□□□□□ -0.14
VCX3A-202ENST00000398729 PPP1R2P41236 205 aa14.18□□□□□ -0.14
VCX3A-202ENST00000398729 TUBP50607 506 aa14.18□□□□□ -0.14
VCX3A-202ENST00000398729 PMS1P54277 932 aaKnown RBP14.18□□□□□ -0.14
VCX3A-202ENST00000398729 ZC3H3Q8IXZ2 948 aaKnown RBP14.18□□□□□ -0.14
VCX3A-202ENST00000398729 SEMA4DQ92854 862 aa14.18□□□□□ -0.14
VCX3A-202ENST00000398729 GMIPQ9P107 970 aa14.18□□□□□ -0.14
VCX3A-202ENST00000398729 CFAP97Q9P2B7 532 aa14.18□□□□□ -0.14
VCX3A-202ENST00000398729 RALYQ9UKM9 306 aaKnown RBP14.18□□□□□ -0.14
VCX3A-202ENST00000398729 ANKRD11Q6UB99 2663 aaPredicted RBP14.18□□□□□ -0.14
VCX3A-202ENST00000398729 TRIM49BA6NDI0 452 aa14.17□□□□□ -0.14
VCX3A-202ENST00000398729 RNF40O75150 1001 aa14.17□□□□□ -0.14
VCX3A-202ENST00000398729 ZDHHC11BP0C7U3 371 aa14.17□□□□□ -0.14
VCX3A-202ENST00000398729 HOXA6P31267 233 aa14.17□□□□□ -0.14
VCX3A-202ENST00000398729 CNR2P34972 360 aa14.17□□□□□ -0.14
VCX3A-202ENST00000398729 ZNF394Q53GI3 561 aa14.17□□□□□ -0.14
VCX3A-202ENST00000398729 N4BP2L1Q5TBK1 243 aaPredicted RBP14.17□□□□□ -0.14
VCX3A-202ENST00000398729 HEATR6Q6AI08 1181 aaKnown RBP14.17□□□□□ -0.14
VCX3A-202ENST00000398729 ISM2Q6H9L7 571 aa14.17□□□□□ -0.14
VCX3A-202ENST00000398729 CLEC20AQ6ZU45 233 aa14.17□□□□□ -0.14
VCX3A-202ENST00000398729 FILIP1Q7Z7B0 1213 aa14.17□□□□□ -0.14
VCX3A-202ENST00000398729 LONP2Q86WA8 852 aa14.17□□□□□ -0.14
VCX3A-202ENST00000398729 FAM160A2Q8N612 972 aaPredicted RBP14.17□□□□□ -0.14
VCX3A-202ENST00000398729 WHAMMQ8TF30 809 aa14.17□□□□□ -0.14
VCX3A-202ENST00000398729 DHTKD1Q96HY7 919 aaPredicted RBP14.17□□□□□ -0.14
VCX3A-202ENST00000398729 NACA2Q9H009 215 aa14.17□□□□□ -0.14
VCX3A-202ENST00000398729 FAM124BQ9H5Z6 455 aaPredicted RBP14.17□□□□□ -0.14
VCX3A-202ENST00000398729 FBRSL1Q9HCM7 1045 aaKnown RBP14.17□□□□□ -0.14
VCX3A-202ENST00000398729 PNPLA8Q9NP80 782 aa14.17□□□□□ -0.14
VCX3A-202ENST00000398729 TLR8Q9NR97 1041 aaKnown RBP14.17□□□□□ -0.14
VCX3A-202ENST00000398729 TBC1D14Q9P2M4 693 aa14.17□□□□□ -0.14
VCX3A-202ENST00000398729 ARMCX3Q9UH62 379 aaPredicted RBP14.17□□□□□ -0.14
VCX3A-202ENST00000398729 MAN1B1Q9UKM7 699 aa14.17□□□□□ -0.14
VCX3A-202ENST00000398729 CIZ1Q9ULV3 898 aaPredicted RBP14.17□□□□□ -0.14
VCX3A-202ENST00000398729 IGF2RP11717 2491 aa14.17□□□□□ -0.14
VCX3A-202ENST00000398729 E2F8A0AVK6 867 aa14.16□□□□□ -0.14
VCX3A-202ENST00000398729 PMLP29590 882 aa14.16□□□□□ -0.14
VCX3A-202ENST00000398729 CBWD6Q4V339 395 aa14.16□□□□□ -0.14
VCX3A-202ENST00000398729 CBWD3Q5JTY5 395 aa14.16□□□□□ -0.14
VCX3A-202ENST00000398729 CBWD5Q5RIA9 395 aa14.16□□□□□ -0.14
VCX3A-202ENST00000398729 NAIF1Q69YI7 327 aaPredicted RBP14.16□□□□□ -0.14
VCX3A-202ENST00000398729 PKN3Q6P5Z2 889 aa14.16□□□□□ -0.14
VCX3A-202ENST00000398729 ADGRG2Q8IZP9 1017 aa14.16□□□□□ -0.14
VCX3A-202ENST00000398729 CCDC26Q8TAB7 109 aa14.16□□□□□ -0.14
VCX3A-202ENST00000398729 JAKMIP2Q96AA8 810 aa14.16□□□□□ -0.14
VCX3A-202ENST00000398729 HEXIM2Q96MH2 286 aaKnown RBP14.16□□□□□ -0.14
VCX3A-202ENST00000398729 CCSER2Q9H7U1 834 aa14.16□□□□□ -0.14
VCX3A-202ENST00000398729 METTL14Q9HCE5 456 aaKnown RBP14.16□□□□□ -0.14
VCX3A-202ENST00000398729 RXFP3Q9NSD7 469 aa14.16□□□□□ -0.14
VCX3A-202ENST00000398729 CISHQ9NSE2 258 aa14.16□□□□□ -0.14
VCX3A-202ENST00000398729 SLC8A2Q9UPR5 921 aa14.16□□□□□ -0.14
VCX3A-202ENST00000398729 SCML2Q9UQR0 700 aa14.16□□□□□ -0.14
VCX3A-202ENST00000398729 COQ4Q9Y3A0 265 aa14.16□□□□□ -0.14
VCX3A-202ENST00000398729 SH3BP1Q9Y3L3 701 aa14.16□□□□□ -0.14
VCX3A-202ENST00000398729 MYO16Q9Y6X6 1858 aa14.16□□□□□ -0.14
VCX3A-202ENST00000398729 SPEGQ15772 3267 aa14.16□□□□□ -0.14
VCX3A-202ENST00000398729 FASNP49327 2511 aaKnown RBP14.15□□□□□ -0.14
VCX3A-202ENST00000398729 HHLA1C9JL84 531 aa14.15□□□□□ -0.14
VCX3A-202ENST00000398729 SCAMP3O14828 347 aaKnown RBP14.15□□□□□ -0.14
VCX3A-202ENST00000398729 TLR5O60602 858 aa14.15□□□□□ -0.14
VCX3A-202ENST00000398729 CYP17A1P05093 508 aa14.15□□□□□ -0.14
VCX3A-202ENST00000398729 ACO1P21399 889 aaKnown RBP14.15□□□□□ -0.14
VCX3A-202ENST00000398729 DHCR24Q15392 516 aa14.15□□□□□ -0.14
VCX3A-202ENST00000398729 PPP1R26Q5T8A7 1209 aaPredicted RBP14.15□□□□□ -0.14
VCX3A-202ENST00000398729 KLHL10Q6JEL2 608 aa14.15□□□□□ -0.14
VCX3A-202ENST00000398729 GPRIN1Q7Z2K8 1008 aa14.15□□□□□ -0.14
VCX3A-202ENST00000398729 TATDN2Q93075 761 aa14.15□□□□□ -0.14
VCX3A-202ENST00000398729 OTUB2Q96DC9 234 aa14.15□□□□□ -0.14
VCX3A-202ENST00000398729 TMEM176AQ96HP8 235 aa14.15□□□□□ -0.14
VCX3A-202ENST00000398729 ZFRQ96KR1 1074 aaKnown RBP14.15□□□□□ -0.14
VCX3A-202ENST00000398729 CEP63Q96MT8 703 aa14.15□□□□□ -0.14
VCX3A-202ENST00000398729 DUSP16Q9BY84 665 aa14.15□□□□□ -0.14
VCX3A-202ENST00000398729 ATG2BQ96BY7 2078 aa14.14□□□□□ -0.15
VCX3A-202ENST00000398729 BICDL2A1A5D9 508 aa14.14□□□□□ -0.15
VCX3A-202ENST00000398729 AXIN1O15169 862 aa14.14□□□□□ -0.15
VCX3A-202ENST00000398729 CYP26A1O43174 497 aa14.14□□□□□ -0.15
VCX3A-202ENST00000398729 GADD45BO75293 160 aaPredicted RBP14.14□□□□□ -0.15
VCX3A-202ENST00000398729 ADH1CP00326 375 aa14.14□□□□□ -0.15
VCX3A-202ENST00000398729 CD44P16070 742 aaKnown RBP14.14□□□□□ -0.15
VCX3A-202ENST00000398729 OPRD1P41143 372 aa14.14□□□□□ -0.15
VCX3A-202ENST00000398729 YWHAEP62258 255 aaKnown RBP14.14□□□□□ -0.15
VCX3A-202ENST00000398729 SF3A2Q15428 464 aaKnown RBP14.14□□□□□ -0.15
VCX3A-202ENST00000398729 GAB4Q2WGN9 574 aa14.14□□□□□ -0.15
VCX3A-202ENST00000398729 CCDC40Q4G0X9 1142 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms