RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 NPR3P17342 541 aa26.87■■□□□ 1.89
SHARPIN-202ENST00000398712 STIP1P31948 543 aaKnown RBP26.87■■□□□ 1.89
SHARPIN-202ENST00000398712 ERMARDQ5T6L9 678 aa26.87■■□□□ 1.89
SHARPIN-202ENST00000398712 AGMOQ6ZNB7 445 aa26.87■■□□□ 1.89
SHARPIN-202ENST00000398712 TAOK1Q7L7X3 1001 aa26.87■■□□□ 1.89
SHARPIN-202ENST00000398712 PIGZQ86VD9 579 aa26.87■■□□□ 1.89
SHARPIN-202ENST00000398712 PPIL6Q8IXY8 311 aa26.87■■□□□ 1.89
SHARPIN-202ENST00000398712 SAYSD1Q9NPB0 183 aa26.87■■□□□ 1.89
SHARPIN-202ENST00000398712 APOL1O14791 398 aa26.86■■□□□ 1.89
SHARPIN-202ENST00000398712 ZNF623O75123 536 aa26.86■■□□□ 1.89
SHARPIN-202ENST00000398712 ACAT1P24752 427 aaKnown RBP26.86■■□□□ 1.89
SHARPIN-202ENST00000398712 CD52P31358 61 aa26.86■■□□□ 1.89
SHARPIN-202ENST00000398712 GDF10P55107 478 aa26.86■■□□□ 1.89
SHARPIN-202ENST00000398712 STAT4Q14765 748 aa26.86■■□□□ 1.89
SHARPIN-202ENST00000398712 LONRF1Q17RB8 773 aa26.86■■□□□ 1.89
SHARPIN-202ENST00000398712 ANKRD20A8PQ5CZ79 823 aa26.86■■□□□ 1.89
SHARPIN-202ENST00000398712 ZC3H12AQ5D1E8 599 aaKnown RBP26.86■■□□□ 1.89
SHARPIN-202ENST00000398712 KCTD13Q8WZ19 329 aa26.86■■□□□ 1.89
SHARPIN-202ENST00000398712 PRCCQ92733 491 aaPredicted RBP26.86■■□□□ 1.89
SHARPIN-202ENST00000398712 MED10Q9BTT4 135 aa26.86■■□□□ 1.89
SHARPIN-202ENST00000398712 PHACTR1Q9C0D0 580 aa26.86■■□□□ 1.89
SHARPIN-202ENST00000398712 GPATCH2LQ9NWQ4 482 aa26.86■■□□□ 1.89
SHARPIN-202ENST00000398712 MIOSQ9NXC5 875 aa26.86■■□□□ 1.89
SHARPIN-202ENST00000398712 DDX43Q9NXZ2 648 aaKnown RBP26.86■■□□□ 1.89
SHARPIN-202ENST00000398712 FARP1Q9Y4F1 1045 aaPredicted RBP26.86■■□□□ 1.89
SHARPIN-202ENST00000398712 ELNP15502 786 aa26.86■■□□□ 1.89
SHARPIN-202ENST00000398712 CTCFP49711 727 aaPredicted RBP26.86■■□□□ 1.89
SHARPIN-202ENST00000398712 SCNN1GP51170 649 aa26.86■■□□□ 1.89
SHARPIN-202ENST00000398712 CLCNKBP51801 687 aa26.86■■□□□ 1.89
SHARPIN-202ENST00000398712 PTK7Q13308 1070 aa26.86■■□□□ 1.89
SHARPIN-202ENST00000398712 DARS2Q6PI48 645 aaKnown RBP26.86■■□□□ 1.89
SHARPIN-202ENST00000398712 DSTYKQ6XUX3 929 aa26.86■■□□□ 1.89
SHARPIN-202ENST00000398712 CENPUQ71F23 418 aa26.86■■□□□ 1.89
SHARPIN-202ENST00000398712 STRADAQ7RTN6 431 aa26.86■■□□□ 1.89
SHARPIN-202ENST00000398712 UNC45BQ8IWX7 931 aa26.86■■□□□ 1.89
SHARPIN-202ENST00000398712 C9orf72Q96LT7 481 aa26.86■■□□□ 1.89
SHARPIN-202ENST00000398712 CABYRO75952 493 aa26.85■■□□□ 1.89
SHARPIN-202ENST00000398712 IL4RP24394 825 aa26.85■■□□□ 1.89
SHARPIN-202ENST00000398712 RPL22P35268 128 aaKnown RBP26.85■■□□□ 1.89
SHARPIN-202ENST00000398712 MMP13P45452 471 aa26.85■■□□□ 1.89
SHARPIN-202ENST00000398712 IFI35P80217 286 aaPredicted RBP26.85■■□□□ 1.89
SHARPIN-202ENST00000398712 ADIGQ0VDE8 80 aa26.85■■□□□ 1.89
SHARPIN-202ENST00000398712 MDH1BQ5I0G3 518 aa26.85■■□□□ 1.89
SHARPIN-202ENST00000398712 NPNTQ6UXI9 565 aa26.85■■□□□ 1.89
SHARPIN-202ENST00000398712 REM2Q8IYK8 340 aaPredicted RBP26.85■■□□□ 1.89
SHARPIN-202ENST00000398712 FAF2Q96CS3 445 aa26.85■■□□□ 1.89
SHARPIN-202ENST00000398712 C10orf88Q9H8K7 445 aa26.85■■□□□ 1.89
SHARPIN-202ENST00000398712 RNF186Q9NXI6 227 aa26.85■■□□□ 1.89
SHARPIN-202ENST00000398712 FAM200BP0CF97 657 aa26.84■■□□□ 1.89
SHARPIN-202ENST00000398712 GHRP10912 638 aa26.84■■□□□ 1.89
SHARPIN-202ENST00000398712 MATKP42679 507 aa26.84■■□□□ 1.89
SHARPIN-202ENST00000398712 DPYSL2Q16555 572 aa26.84■■□□□ 1.89
SHARPIN-202ENST00000398712 SLC9A4Q6AI14 798 aa26.84■■□□□ 1.89
SHARPIN-202ENST00000398712 PLD5Q8N7P1 536 aa26.84■■□□□ 1.89
SHARPIN-202ENST00000398712 FAM71DQ8N9W8 422 aa26.84■■□□□ 1.89
SHARPIN-202ENST00000398712 SYT15Q9BQS2 421 aa26.84■■□□□ 1.89
SHARPIN-202ENST00000398712 LRRC4Q9HBW1 653 aa26.84■■□□□ 1.89
SHARPIN-202ENST00000398712 NOD1Q9Y239 953 aa26.84■■□□□ 1.89
SHARPIN-202ENST00000398712 THSD7BQ9C0I4 1608 aa26.84■■□□□ 1.89
SHARPIN-202ENST00000398712 A0A087WUV0 522 aaPredicted RBP26.84■■□□□ 1.89
SHARPIN-202ENST00000398712 CLDN5O00501 218 aa26.84■■□□□ 1.89
SHARPIN-202ENST00000398712 DAB1O75553 588 aa26.84■■□□□ 1.89
SHARPIN-202ENST00000398712 BCAR1P56945 870 aa26.84■■□□□ 1.89
SHARPIN-202ENST00000398712 DSC3Q14574 896 aa26.84■■□□□ 1.89
SHARPIN-202ENST00000398712 PAQR9Q6ZVX9 377 aa26.84■■□□□ 1.89
SHARPIN-202ENST00000398712 RNF180Q86T96 592 aa26.84■■□□□ 1.89
SHARPIN-202ENST00000398712 CENPTQ96BT3 561 aa26.84■■□□□ 1.89
SHARPIN-202ENST00000398712 PGBD4Q96DM1 585 aa26.84■■□□□ 1.89
SHARPIN-202ENST00000398712 CACNG4Q9UBN1 327 aa26.84■■□□□ 1.89
SHARPIN-202ENST00000398712 CFAP69A5D8W1 941 aa26.83■■□□□ 1.89
SHARPIN-202ENST00000398712 H7C0C1 242 aa26.83■■□□□ 1.89
SHARPIN-202ENST00000398712 NDUFAB1O14561 156 aa26.83■■□□□ 1.89
SHARPIN-202ENST00000398712 SKIP12755 728 aa26.83■■□□□ 1.89
SHARPIN-202ENST00000398712 TFE3P19532 575 aaPredicted RBP26.83■■□□□ 1.89
SHARPIN-202ENST00000398712 ATP5OP48047 213 aa26.83■■□□□ 1.89
SHARPIN-202ENST00000398712 AFF1P51825 1210 aaKnown RBP26.83■■□□□ 1.89
SHARPIN-202ENST00000398712 ITGA7Q13683 1181 aa26.83■■□□□ 1.89
SHARPIN-202ENST00000398712 LPIN1Q14693 890 aa26.83■■□□□ 1.89
SHARPIN-202ENST00000398712 CA9Q16790 459 aa26.83■■□□□ 1.89
SHARPIN-202ENST00000398712 C1orf228Q6PIY5 440 aa26.83■■□□□ 1.89
SHARPIN-202ENST00000398712 CLEC20AQ6ZU45 233 aa26.83■■□□□ 1.89
SHARPIN-202ENST00000398712 ZC3H18Q86VM9 953 aaKnown RBP26.83■■□□□ 1.89
SHARPIN-202ENST00000398712 PQLC3Q8N755 202 aa26.83■■□□□ 1.89
SHARPIN-202ENST00000398712 CPT1BQ92523 772 aa26.83■■□□□ 1.89
SHARPIN-202ENST00000398712 SELENOSQ9BQE4 189 aa26.83■■□□□ 1.89
SHARPIN-202ENST00000398712 UBN1Q9NPG3 1134 aa26.83■■□□□ 1.89
SHARPIN-202ENST00000398712 AP4E1Q9UPM8 1137 aa26.83■■□□□ 1.89
SHARPIN-202ENST00000398712 A0A0U1RQF3 1178 aa26.82■■□□□ 1.88
SHARPIN-202ENST00000398712 ALOX15BO15296 676 aa26.82■■□□□ 1.88
SHARPIN-202ENST00000398712 ZFXP17010 805 aaPredicted RBP26.82■■□□□ 1.88
SHARPIN-202ENST00000398712 HOXD10P28358 340 aa26.82■■□□□ 1.88
SHARPIN-202ENST00000398712 ARL4CP56559 192 aa26.82■■□□□ 1.88
SHARPIN-202ENST00000398712 MRPS5P82675 430 aaKnown RBP26.82■■□□□ 1.88
SHARPIN-202ENST00000398712 CAP1Q01518 475 aa26.82■■□□□ 1.88
SHARPIN-202ENST00000398712 HIF1AQ16665 826 aa26.82■■□□□ 1.88
SHARPIN-202ENST00000398712 CCDC142Q17RM4 750 aa26.82■■□□□ 1.88
SHARPIN-202ENST00000398712 SLC25A52Q3SY17 297 aa26.82■■□□□ 1.88
SHARPIN-202ENST00000398712 PPP6R3Q5H9R7 873 aaPredicted RBP26.82■■□□□ 1.88
SHARPIN-202ENST00000398712 FAM26DQ5JW98 314 aa26.82■■□□□ 1.88
SHARPIN-202ENST00000398712 FOXR1Q6PIV2 292 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms