RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 IFFO1Q0D2I5 559 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 GALNT1Q10472 559 aaPredicted RBP6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 SPIDRQ14159 915 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 SLC9C1Q4G0N8 1177 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 C6orf132Q5T0Z8 1188 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 C6orf183Q5T699 404 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 ANKRD40Q6AI12 368 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 TTC23LQ6PF05 361 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 RRAGAQ7L523 313 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 NEK8Q86SG6 692 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 ANKS4BQ8N8V4 417 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 ZNF454Q8N9F8 522 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 DNAAF3Q8N9W5 541 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 ST13P5Q8NFI4 369 aaPredicted RBP6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 OR7G1Q8NGA0 311 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 RIN2Q8WYP3 895 aaPredicted RBP6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 BAP1Q92560 729 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 NSUN4Q96CB9 384 aaKnown RBP6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 TRIM62Q9BVG3 475 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 RHOBTB2Q9BYZ6 727 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 BARHL2Q9NY43 387 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 CHORDC1Q9UHD1 332 aaPredicted RBP6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 TSR3Q9UJK0 312 aaKnown RBP6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 PCDHA6Q9UN73 950 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 STX8Q9UNK0 236 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 PCDHA8Q9Y5H6 950 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 LAMA3Q16787 3333 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 PLGP00747 810 aaPredicted RBP6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 HDCP19113 662 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 HNRNPH3P31942 346 aaKnown RBP6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 EIF4A3P38919 411 aaKnown RBP6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 OR1G1P47890 313 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 IRAK1P51617 712 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 CYP4F2P78329 520 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 CYP4F3Q08477 520 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 AP3B2Q13367 1082 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 ODF1Q14990 250 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 GPR139Q6DWJ6 353 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 WDR73Q6P4I2 378 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 ZYG11AQ6WRX3 759 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 GSPT2Q8IYD1 628 aaKnown RBP6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 NUP93Q8N1F7 819 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 RRP36Q96EU6 259 aaKnown RBP6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 METTL2AQ96IZ6 378 aaKnown RBP6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 FAM84BQ96KN1 310 aaPredicted RBP6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 TMEM60Q9H2L4 133 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 XKR8Q9H6D3 395 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 NDUFA13Q9P0J0 144 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 FETUBQ9UGM5 382 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 ANGPTL2Q9UKU9 493 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 CNOT6Q9ULM6 557 aaKnown RBP6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 TFR2Q9UP52 801 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 GPR52Q9Y2T5 361 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 FAM169AQ9Y6X4 670 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 FAM205AQ6ZU69 1335 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 CDH23Q9H251 3354 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 PVALEFA0A1B0GWK0 134 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 EIF3HO15372 352 aaKnown RBP eCLIP6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 CAMTA2O94983 1202 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 MOCS3O95396 460 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 IFRD2Q12894 506 aaPredicted RBP6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 NFIXQ14938 502 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 HADHQ16836 314 aaKnown RBP6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 HS2ST1Q7LGA3 356 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 CCDC25Q86WR0 208 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 FBXO15Q8NCQ5 510 aaPredicted RBP6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 IFI44Q8TCB0 444 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 ANKRD36BP1Q96IX9 119 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 C19orf43Q9BQ61 176 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 STN1Q9H668 368 aaKnown RBP6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 TM9SF3Q9HD45 589 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 ASIC3Q9UHC3 531 aa6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 BAZ2AQ9UIF9 1905 aaKnown RBP6.85□□□□□ -1.31
TM9SF4-202ENST00000398022 PDE2AO00408 941 aaPredicted RBP6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 MGRN1O60291 552 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 ARHGEF15O94989 841 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 PTPN2P17706 415 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 RFC4P35249 363 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 CRKP46108 304 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 TNNC1P63316 161 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 STK4Q13043 487 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 ACAP2Q15057 778 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 PDCD4Q53EL6 469 aaKnown RBP6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 KANK2Q63ZY3 851 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 ZNF572Q7Z3I7 529 aaPredicted RBP6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 COMTD1Q86VU5 262 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 CREG2Q8IUH2 290 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 ARFGAP2Q8N6H7 521 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 OR56B2PQ8NGI1 322 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 CHAC2Q8WUX2 184 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 EEF2KMTQ96G04 330 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 LRRC1Q9BTT6 524 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 PLEKHA4Q9H4M7 779 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 TMEM260Q9NX78 707 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 SLC7A8Q9UHI5 535 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 HEY1Q9Y5J3 304 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 SNX9Q9Y5X1 595 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 TLL2Q9Y6L7 1015 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 STON1Q9Y6Q2 735 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 SSU72P8A0A1W2PR75 194 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms