RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 DGKDQ16760 1214 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 ZNF618Q5T7W0 954 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 LRRC38Q5VT99 294 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 MECRQ9BV79 373 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 SOCS7O14512 581 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 ALOX15BO15296 676 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 NQO1P15559 274 aaKnown RBP10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 EDNRBP24530 442 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 SLC26A2P50443 739 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 GPX6P59796 221 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 SLC25A11Q02978 314 aaKnown RBP10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 ARHGAP1Q07960 439 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 OASLQ15646 514 aaKnown RBP10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 EMC10Q5UCC4 262 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 PIGWQ7Z7B1 504 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 IGDCC3Q8IVU1 814 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 SLCO2A1Q92959 643 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 SIK2Q9H0K1 926 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 C5orf60A6NFR6 353 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 BHMG1C9JSJ3 638 aaPredicted RBP10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 KCNK1O00180 336 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 TSPAN1O60635 241 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 ZNF143P52747 638 aaPredicted RBP10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 NR1H3Q13133 447 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 ZCCHC23Q6ZST2 131 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 CTU1Q7Z7A3 348 aaKnown RBP10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 ECHDC2Q86YB7 292 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 ZNF75CPQ92670 426 aaPredicted RBP10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 STAMBPL1Q96FJ0 436 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 TMEM109Q9BVC6 243 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 RNF39Q9H2S5 420 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 ASB7Q9H672 318 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 SMG5Q9UPR3 1016 aaKnown RBP10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 DRG1Q9Y295 367 aaKnown RBP10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 CENPFP49454 3210 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 DIAPH2O60879 1101 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 KRT16P08779 473 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 GRIA1P42261 906 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 PPIL2Q13356 520 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 TAF1BQ53T94 588 aaPredicted RBP10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 LGSNQ5TDP6 509 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 CDCA2Q69YH5 1023 aaPredicted RBP10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 PID1Q7Z2X4 250 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 APBB1IPQ7Z5R6 666 aaPredicted RBP10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 APPL2Q8NEU8 664 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 USP33Q8TEY7 942 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 N4BP2L2Q92802 583 aaPredicted RBP10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 LGMNQ99538 433 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 TSSK1BQ9BXA7 367 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 SHCBP1LQ9BZQ2 653 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 MANSC1Q9H8J5 431 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 UBP1Q9NZI7 540 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 PPARGC1AQ9UBK2 798 aaKnown RBP10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 PCDHGC3Q9UN70 934 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 AP4E1Q9UPM8 1137 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 TCRBV9S1A1TA0A576 114 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 ATP9BO43861 1147 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 UGT1A9O60656 530 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 KRT37O76014 449 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 SMPD1P17405 629 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 GTF2A2P52657 109 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 ARFIP2P53365 341 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 ADIGQ0VDE8 80 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 CCDC62Q6P9F0 684 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 KCNT2Q6UVM3 1135 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 HACE1Q8IYU2 909 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 NDUFAF2Q8N183 169 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 SLC35B2Q8TB61 432 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 PPP1R36Q96LQ0 422 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 ZFP42Q96MM3 310 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 ZMAT2Q96NC0 199 aaKnown RBP10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 RNF157Q96PX1 679 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 FERMT1Q9BQL6 677 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 TRIM55Q9BYV6 548 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 UGT1A7Q9HAW7 530 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 UGT1A10Q9HAW8 530 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 UGT1A8Q9HAW9 530 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 SMYD2Q9NRG4 433 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 ARMCX1Q9P291 453 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 KLHL8Q9P2G9 620 aaPredicted RBP10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 SLC17A6Q9P2U8 582 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 MFHAS1Q9Y4C4 1052 aa10.85□□□□□ -0.67
CPSF1P1-201ENST00000397477 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 BTBD19C9JJ37 291 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 ATP6V1G2O95670 118 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 C6orf222P0C671 652 aaPredicted RBP10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 SNX16P57768 344 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 NCALDP61601 193 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 ACVR2BQ13705 512 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 BOLA3Q53S33 107 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 DSTYKQ6XUX3 929 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 NLRP9Q7RTR0 991 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 PRPF39Q86UA1 669 aaKnown RBP10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 TTC30AQ86WT1 665 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 NKD2Q969F2 451 aaPredicted RBP10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 PGBD4Q96DM1 585 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 PGLYRP2Q96PD5 576 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 FAM167BQ9BTA0 163 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms