RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 SCD5Q86SK9 330 aa22.28■■□□□ 1.16
TSPAN4-206ENST00000397408 SH3RF2Q8TEC5 729 aa22.28■■□□□ 1.16
TSPAN4-206ENST00000397408 NDRG1Q92597 394 aaKnown RBP22.28■■□□□ 1.16
TSPAN4-206ENST00000397408 ASIC4Q96FT7 647 aa22.28■■□□□ 1.16
TSPAN4-206ENST00000397408 HSFY1Q96LI6 401 aa22.28■■□□□ 1.16
TSPAN4-206ENST00000397408 NACA2Q9H009 215 aa22.28■■□□□ 1.16
TSPAN4-206ENST00000397408 CYLDQ9NQC7 956 aa22.28■■□□□ 1.16
TSPAN4-206ENST00000397408 SMPD4Q9NXE4 827 aa22.28■■□□□ 1.16
TSPAN4-206ENST00000397408 PCDHGC3Q9UN70 934 aa22.28■■□□□ 1.16
TSPAN4-206ENST00000397408 CPQQ9Y646 472 aa22.28■■□□□ 1.16
TSPAN4-206ENST00000397408 A0A1W2PQC6 194 aa22.27■■□□□ 1.16
TSPAN4-206ENST00000397408 ZNF263O14978 683 aa22.27■■□□□ 1.16
TSPAN4-206ENST00000397408 GABBR2O75899 941 aa22.27■■□□□ 1.16
TSPAN4-206ENST00000397408 RARGP13631 454 aa22.27■■□□□ 1.16
TSPAN4-206ENST00000397408 KRT9P35527 623 aa22.27■■□□□ 1.16
TSPAN4-206ENST00000397408 SOX5P35711 763 aa22.27■■□□□ 1.16
TSPAN4-206ENST00000397408 STAT1P42224 750 aa22.27■■□□□ 1.16
TSPAN4-206ENST00000397408 PSEN1P49768 467 aa22.27■■□□□ 1.16
TSPAN4-206ENST00000397408 UBASH3AP57075 661 aa22.27■■□□□ 1.16
TSPAN4-206ENST00000397408 PFKPQ01813 784 aa22.27■■□□□ 1.16
TSPAN4-206ENST00000397408 NR1I3Q14994 352 aa22.27■■□□□ 1.16
TSPAN4-206ENST00000397408 ZNF77Q15935 545 aa22.27■■□□□ 1.16
TSPAN4-206ENST00000397408 PM20D1Q6GTS8 502 aa22.27■■□□□ 1.16
TSPAN4-206ENST00000397408 CACNA2D4Q7Z3S7 1137 aa22.27■■□□□ 1.16
TSPAN4-206ENST00000397408 ZFYVE19Q96K21 471 aa22.27■■□□□ 1.16
TSPAN4-206ENST00000397408 C11orf16Q9NQ32 467 aa22.27■■□□□ 1.16
TSPAN4-206ENST00000397408 CNGB3Q9NQW8 809 aa22.27■■□□□ 1.16
TSPAN4-206ENST00000397408 ST7Q9NRC1 585 aa22.27■■□□□ 1.16
TSPAN4-206ENST00000397408 CYTH4Q9UIA0 394 aa22.27■■□□□ 1.16
TSPAN4-206ENST00000397408 CA14Q9ULX7 337 aa22.27■■□□□ 1.16
TSPAN4-206ENST00000397408 YWHAGP61981 247 aaKnown RBP eCLIP22.26■■□□□ 1.15
TSPAN4-206ENST00000397408 ZXDBP98169 803 aa22.26■■□□□ 1.15
TSPAN4-206ENST00000397408 MTF1Q14872 753 aa22.26■■□□□ 1.15
TSPAN4-206ENST00000397408 ARHGAP29Q52LW3 1261 aa22.26■■□□□ 1.15
TSPAN4-206ENST00000397408 TAF3Q5VWG9 929 aa22.26■■□□□ 1.15
TSPAN4-206ENST00000397408 BHLHA9Q7RTU4 235 aa22.26■■□□□ 1.15
TSPAN4-206ENST00000397408 ARHGAP18Q8N392 663 aa22.26■■□□□ 1.15
TSPAN4-206ENST00000397408 EPS8L1Q8TE68 723 aa22.26■■□□□ 1.15
TSPAN4-206ENST00000397408 IRF7Q92985 503 aa22.26■■□□□ 1.15
TSPAN4-206ENST00000397408 C1QTNF1Q9BXJ1 281 aa22.26■■□□□ 1.15
TSPAN4-206ENST00000397408 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.26■■□□□ 1.15
TSPAN4-206ENST00000397408 THG1LQ9NWX6 298 aaKnown RBP22.26■■□□□ 1.15
TSPAN4-206ENST00000397408 WNT16Q9UBV4 365 aa22.26■■□□□ 1.15
TSPAN4-206ENST00000397408 KIF26AQ9ULI4 1882 aaPredicted RBP22.26■■□□□ 1.15
TSPAN4-206ENST00000397408 LEFTY2O00292 366 aa22.25■■□□□ 1.15
TSPAN4-206ENST00000397408 CHADO15335 359 aa22.25■■□□□ 1.15
TSPAN4-206ENST00000397408 TBX18O95935 607 aa22.25■■□□□ 1.15
TSPAN4-206ENST00000397408 RALAP11233 206 aa22.25■■□□□ 1.15
TSPAN4-206ENST00000397408 DAOAP59103 153 aa22.25■■□□□ 1.15
TSPAN4-206ENST00000397408 PDCLQ13371 301 aa22.25■■□□□ 1.15
TSPAN4-206ENST00000397408 NOP9Q86U38 636 aaKnown RBP22.25■■□□□ 1.15
TSPAN4-206ENST00000397408 SIX5Q8N196 739 aa22.25■■□□□ 1.15
TSPAN4-206ENST00000397408 SCML4Q8N228 414 aa22.25■■□□□ 1.15
TSPAN4-206ENST00000397408 C1orf131Q8NDD1 294 aaKnown RBP22.25■■□□□ 1.15
TSPAN4-206ENST00000397408 STK32AQ8WU08 396 aa22.25■■□□□ 1.15
TSPAN4-206ENST00000397408 DNASE1L2Q92874 299 aa22.25■■□□□ 1.15
TSPAN4-206ENST00000397408 PDCL3Q9H2J4 239 aa22.25■■□□□ 1.15
TSPAN4-206ENST00000397408 ARHGEF3Q9NR81 526 aa22.25■■□□□ 1.15
TSPAN4-206ENST00000397408 CLIC5Q9NZA1 410 aa22.25■■□□□ 1.15
TSPAN4-206ENST00000397408 IFNKQ9P0W0 207 aa22.25■■□□□ 1.15
TSPAN4-206ENST00000397408 NUDT5Q9UKK9 219 aa22.25■■□□□ 1.15
TSPAN4-206ENST00000397408 CEP83Q9Y592 693 aa22.25■■□□□ 1.15
TSPAN4-206ENST00000397408 TCF3P15923 654 aa22.24■■□□□ 1.15
TSPAN4-206ENST00000397408 ACADSBP45954 432 aa22.24■■□□□ 1.15
TSPAN4-206ENST00000397408 C10orf120Q5SQS8 335 aa22.24■■□□□ 1.15
TSPAN4-206ENST00000397408 IER5LQ5T953 404 aa22.24■■□□□ 1.15
TSPAN4-206ENST00000397408 CC2D1AQ6P1N0 951 aaPredicted RBP22.24■■□□□ 1.15
TSPAN4-206ENST00000397408 TADA2BQ86TJ2 420 aa22.24■■□□□ 1.15
TSPAN4-206ENST00000397408 CLEC4CQ8WTT0 213 aa22.24■■□□□ 1.15
TSPAN4-206ENST00000397408 DDX1Q92499 740 aaKnown RBP22.24■■□□□ 1.15
TSPAN4-206ENST00000397408 SLC4A5Q9BY07 1137 aa22.24■■□□□ 1.15
TSPAN4-206ENST00000397408 MIS12Q9H081 205 aa22.24■■□□□ 1.15
TSPAN4-206ENST00000397408 LHX5Q9H2C1 402 aa22.24■■□□□ 1.15
TSPAN4-206ENST00000397408 TICRRQ7Z2Z1 1910 aa22.24■■□□□ 1.15
TSPAN4-206ENST00000397408 KRBA1A5PL33 1030 aa22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 YJEFN3A6XGL0 299 aa22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 E5RJQ4 531 aa22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 E7ENQ6 273 aa22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 ARNTLO00327 626 aa22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 MDM4O15151 490 aa22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 FBXO21O94952 628 aa22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 ATP5C1P36542 298 aaKnown RBP22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 RPL34P49207 117 aaKnown RBP22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 PLCB2Q00722 1185 aa22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 TMEM31Q5JXX7 168 aa22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 DDX42Q86XP3 938 aaKnown RBP eCLIP22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 WDTC1Q8N5D0 677 aa22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 ZFRQ96KR1 1074 aaKnown RBP22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 CFAP97Q9P2B7 532 aa22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 NOCTQ9UK39 431 aaKnown RBP22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 COL4A2P08572 1712 aa22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 GPR37L1O60883 481 aa22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 PDGFBP01127 241 aaPredicted RBP22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 ARID5AQ03989 594 aa22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 BTBD8Q5XKL5 378 aa22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 KLHDC10Q6PID8 442 aa22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 RSRC2Q7L4I2 434 aaKnown RBP22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 SLC20A1Q8WUM9 679 aa22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 IRGQQ8WZA9 623 aa22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 BAP1Q92560 729 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms