RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 BDNFP23560 247 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 RRM1P23921 792 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 CDH5P33151 784 aaPredicted RBP15.65■□□□□ 0.1
CAPN3-207ENST00000397200 IRS1P35568 1242 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 BST2Q10589 180 aaKnown RBP15.65■□□□□ 0.1
CAPN3-207ENST00000397200 CYP1B1Q16678 543 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 TPGS2Q68CL5 300 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 TTC30AQ86WT1 665 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 TMEM35BQ8NCS4 154 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 ZNF461Q8TAF7 563 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 UBA3Q8TBC4 463 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 SPPL2BQ8TCT7 592 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 KLHL5Q96PQ7 755 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 SH3GL2Q99962 352 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 DUSP16Q9BY84 665 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 LHX5Q9H2C1 402 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 AFF4Q9UHB7 1163 aaKnown RBP15.65■□□□□ 0.1
CAPN3-207ENST00000397200 CHORDC1Q9UHD1 332 aaPredicted RBP15.65■□□□□ 0.1
CAPN3-207ENST00000397200 NFU1Q9UMS0 254 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 NR2E1Q9Y466 385 aa15.65■□□□□ 0.1
CAPN3-207ENST00000397200 ATG2AQ2TAZ0 1938 aa15.64■□□□□ 0.09
CAPN3-207ENST00000397200 TRIOBPQ9H2D6 2365 aa15.64■□□□□ 0.09
CAPN3-207ENST00000397200 CHD7Q9P2D1 2997 aa15.64■□□□□ 0.09
CAPN3-207ENST00000397200 TMEM265A0A087WTH1 108 aa15.64■□□□□ 0.09
CAPN3-207ENST00000397200 GOLGA6L10A0A0M3HER8 536 aa15.64■□□□□ 0.09
CAPN3-207ENST00000397200 TMEM110-MUSTN1A8MSY1 372 aa15.64■□□□□ 0.09
CAPN3-207ENST00000397200 SETSIPP0DME0 302 aa15.64■□□□□ 0.09
CAPN3-207ENST00000397200 KLRC2P26717 231 aa15.64■□□□□ 0.09
CAPN3-207ENST00000397200 SLC1A1P43005 524 aa15.64■□□□□ 0.09
CAPN3-207ENST00000397200 ADCY1Q08828 1119 aa15.64■□□□□ 0.09
CAPN3-207ENST00000397200 ZNF211Q13398 564 aaPredicted RBP15.64■□□□□ 0.09
CAPN3-207ENST00000397200 DHX34Q14147 1143 aaKnown RBP15.64■□□□□ 0.09
CAPN3-207ENST00000397200 HSP90B2PQ58FF3 399 aa15.64■□□□□ 0.09
CAPN3-207ENST00000397200 SEL1L2Q5TEA6 688 aa15.64■□□□□ 0.09
CAPN3-207ENST00000397200 ALS2CLQ60I27 953 aa15.64■□□□□ 0.09
CAPN3-207ENST00000397200 PLEKHA7Q6IQ23 1121 aa15.64■□□□□ 0.09
CAPN3-207ENST00000397200 CPNE8Q86YQ8 564 aa15.64■□□□□ 0.09
CAPN3-207ENST00000397200 ATAD1Q8NBU5 361 aa15.64■□□□□ 0.09
CAPN3-207ENST00000397200 TSEN2Q8NCE0 465 aaKnown RBP15.64■□□□□ 0.09
CAPN3-207ENST00000397200 CPA5Q8WXQ8 436 aa15.64■□□□□ 0.09
CAPN3-207ENST00000397200 BTBD6Q96KE9 485 aa15.64■□□□□ 0.09
CAPN3-207ENST00000397200 GDAP1L1Q96MZ0 367 aa15.64■□□□□ 0.09
CAPN3-207ENST00000397200 HINFPQ9BQA5 517 aa15.64■□□□□ 0.09
CAPN3-207ENST00000397200 RHOBTB2Q9BYZ6 727 aa15.64■□□□□ 0.09
CAPN3-207ENST00000397200 ANAPC7Q9UJX3 599 aa15.64■□□□□ 0.09
CAPN3-207ENST00000397200 FAM187AA6NFU0 413 aa15.63■□□□□ 0.09
CAPN3-207ENST00000397200 RFXAPO00287 272 aa15.63■□□□□ 0.09
CAPN3-207ENST00000397200 POLR3GO15318 223 aaPredicted RBP15.63■□□□□ 0.09
CAPN3-207ENST00000397200 SPOPO43791 374 aa15.63■□□□□ 0.09
CAPN3-207ENST00000397200 PHF2O75151 1096 aa15.63■□□□□ 0.09
CAPN3-207ENST00000397200 ABLIM3O94929 683 aa15.63■□□□□ 0.09
CAPN3-207ENST00000397200 NPR3P17342 541 aa15.63■□□□□ 0.09
CAPN3-207ENST00000397200 CYP2F1P24903 491 aa15.63■□□□□ 0.09
CAPN3-207ENST00000397200 PDE4CQ08493 712 aa15.63■□□□□ 0.09
CAPN3-207ENST00000397200 PKDCCQ504Y2 493 aa15.63■□□□□ 0.09
CAPN3-207ENST00000397200 CLEC20AQ6ZU45 233 aa15.63■□□□□ 0.09
CAPN3-207ENST00000397200 C12orf50Q8NA57 414 aaPredicted RBP15.63■□□□□ 0.09
CAPN3-207ENST00000397200 C1orf131Q8NDD1 294 aaKnown RBP15.63■□□□□ 0.09
CAPN3-207ENST00000397200 PSD3Q9NYI0 1048 aa15.63■□□□□ 0.09
CAPN3-207ENST00000397200 AMACRQ9UHK6 382 aa15.63■□□□□ 0.09
CAPN3-207ENST00000397200 PLXNA3P51805 1871 aa15.63■□□□□ 0.09
CAPN3-207ENST00000397200 GOLGA6BA6NDN3 693 aa15.62■□□□□ 0.09
CAPN3-207ENST00000397200 VNN2O95498 520 aa15.62■□□□□ 0.09
CAPN3-207ENST00000397200 FAM153BP0C7A2 387 aa15.62■□□□□ 0.09
CAPN3-207ENST00000397200 PYGMP11217 842 aa15.62■□□□□ 0.09
CAPN3-207ENST00000397200 ATF2P15336 505 aa15.62■□□□□ 0.09
CAPN3-207ENST00000397200 MMP8P22894 467 aa15.62■□□□□ 0.09
CAPN3-207ENST00000397200 CHRNA3P32297 505 aa15.62■□□□□ 0.09
CAPN3-207ENST00000397200 MAN1A1P33908 653 aa15.62■□□□□ 0.09
CAPN3-207ENST00000397200 HSPA9P38646 679 aaKnown RBP15.62■□□□□ 0.09
CAPN3-207ENST00000397200 GRIK1P39086 918 aa15.62■□□□□ 0.09
CAPN3-207ENST00000397200 GPD2P43304 727 aa15.62■□□□□ 0.09
CAPN3-207ENST00000397200 MAGEA11P43364 429 aa15.62■□□□□ 0.09
CAPN3-207ENST00000397200 RWDD2BP57060 319 aa15.62■□□□□ 0.09
CAPN3-207ENST00000397200 MAP3K7CLP57077 242 aa15.62■□□□□ 0.09
CAPN3-207ENST00000397200 SIX1Q15475 284 aaPredicted RBP15.62■□□□□ 0.09
CAPN3-207ENST00000397200 FAM153CQ494X1 144 aa15.62■□□□□ 0.09
CAPN3-207ENST00000397200 LIN9Q5TKA1 542 aa15.62■□□□□ 0.09
CAPN3-207ENST00000397200 VSTM1Q6UX27 236 aa15.62■□□□□ 0.09
CAPN3-207ENST00000397200 SLC13A5Q86YT5 568 aaPredicted RBP15.62■□□□□ 0.09
CAPN3-207ENST00000397200 SCN4BQ8IWT1 228 aa15.62■□□□□ 0.09
CAPN3-207ENST00000397200 PRELID2Q8N945 189 aa15.62■□□□□ 0.09
CAPN3-207ENST00000397200 EXOC4Q96A65 974 aa15.62■□□□□ 0.09
CAPN3-207ENST00000397200 SEPT5Q99719 369 aaPredicted RBP15.62■□□□□ 0.09
CAPN3-207ENST00000397200 SMOQ99835 787 aa15.62■□□□□ 0.09
CAPN3-207ENST00000397200 MRPL47Q9HD33 250 aaKnown RBP15.62■□□□□ 0.09
CAPN3-207ENST00000397200 DMAP1Q9NPF5 467 aaPredicted RBP15.62■□□□□ 0.09
CAPN3-207ENST00000397200 PCYOX1Q9UHG3 505 aa15.62■□□□□ 0.09
CAPN3-207ENST00000397200 FAM153AQ9UHL3 310 aa15.62■□□□□ 0.09
CAPN3-207ENST00000397200 MAFFQ9ULX9 164 aa15.62■□□□□ 0.09
CAPN3-207ENST00000397200 SLC27A5Q9Y2P5 690 aa15.62■□□□□ 0.09
CAPN3-207ENST00000397200 SCINQ9Y6U3 715 aa15.62■□□□□ 0.09
CAPN3-207ENST00000397200 MYO9BQ13459 2157 aa15.62■□□□□ 0.09
CAPN3-207ENST00000397200 TCRBV5S1A1TA0A578 114 aa15.61■□□□□ 0.09
CAPN3-207ENST00000397200 XPO1O14980 1071 aaKnown RBP15.61■□□□□ 0.09
CAPN3-207ENST00000397200 TRIM66O15016 1216 aa15.61■□□□□ 0.09
CAPN3-207ENST00000397200 TTI1O43156 1089 aa15.61■□□□□ 0.09
CAPN3-207ENST00000397200 BEST1O76090 585 aa15.61■□□□□ 0.09
CAPN3-207ENST00000397200 PROSCO94903 275 aa15.61■□□□□ 0.09
CAPN3-207ENST00000397200 ELF1P32519 619 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms