RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 CLSTN3Q9BQT9 956 aa13.96□□□□□ -0.17
SEC13-209ENST00000397117 ACBD6Q9BR61 282 aa13.96□□□□□ -0.17
SEC13-209ENST00000397117 DDX23Q9BUQ8 820 aaKnown RBP13.96□□□□□ -0.17
SEC13-209ENST00000397117 THAP2Q9H0W7 228 aa13.96□□□□□ -0.17
SEC13-209ENST00000397117 DLL3Q9NYJ7 618 aa13.96□□□□□ -0.17
SEC13-209ENST00000397117 FBXW11Q9UKB1 542 aa13.96□□□□□ -0.17
SEC13-209ENST00000397117 CDH7Q9ULB5 785 aa13.96□□□□□ -0.17
SEC13-209ENST00000397117 DUSP10Q9Y6W6 482 aa13.96□□□□□ -0.17
SEC13-209ENST00000397117 TPRP12270 2363 aaKnown RBP13.95□□□□□ -0.18
SEC13-209ENST00000397117 COL4A3Q01955 1670 aa13.95□□□□□ -0.18
SEC13-209ENST00000397117 TUBB4AP04350 444 aa13.95□□□□□ -0.18
SEC13-209ENST00000397117 MYBL1P10243 752 aa13.95□□□□□ -0.18
SEC13-209ENST00000397117 CCDC130P13994 396 aa13.95□□□□□ -0.18
SEC13-209ENST00000397117 ADORA2BP29275 332 aa13.95□□□□□ -0.18
SEC13-209ENST00000397117 TKTP29401 623 aaKnown RBP13.95□□□□□ -0.18
SEC13-209ENST00000397117 CDH5P33151 784 aaPredicted RBP13.95□□□□□ -0.18
SEC13-209ENST00000397117 NOP2P46087 812 aaKnown RBP13.95□□□□□ -0.18
SEC13-209ENST00000397117 SLC8A3P57103 927 aa13.95□□□□□ -0.18
SEC13-209ENST00000397117 GNG11P61952 73 aa13.95□□□□□ -0.18
SEC13-209ENST00000397117 TSPY1Q01534 308 aa13.95□□□□□ -0.18
SEC13-209ENST00000397117 MDH1BQ5I0G3 518 aa13.95□□□□□ -0.18
SEC13-209ENST00000397117 RTP2Q5QGT7 225 aa13.95□□□□□ -0.18
SEC13-209ENST00000397117 LIN9Q5TKA1 542 aa13.95□□□□□ -0.18
SEC13-209ENST00000397117 NYAP1Q6ZVC0 841 aa13.95□□□□□ -0.18
SEC13-209ENST00000397117 GRASPQ7Z6J2 395 aaPredicted RBP13.95□□□□□ -0.18
SEC13-209ENST00000397117 UBA3Q8TBC4 463 aa13.95□□□□□ -0.18
SEC13-209ENST00000397117 ZNF653Q96CK0 615 aa13.95□□□□□ -0.18
SEC13-209ENST00000397117 LPIN3Q9BQK8 851 aa13.95□□□□□ -0.18
SEC13-209ENST00000397117 MED10Q9BTT4 135 aa13.95□□□□□ -0.18
SEC13-209ENST00000397117 ADAM22Q9P0K1 906 aa13.95□□□□□ -0.18
SEC13-209ENST00000397117 CACNA1BQ00975 2339 aa13.95□□□□□ -0.18
SEC13-209ENST00000397117 DNAH14Q0VDD8 3507 aa13.94□□□□□ -0.18
SEC13-209ENST00000397117 KANSL1LA0AUZ9 987 aa13.94□□□□□ -0.18
SEC13-209ENST00000397117 BTNL10A8MVZ5 291 aa13.94□□□□□ -0.18
SEC13-209ENST00000397117 ATP2C2O75185 946 aa13.94□□□□□ -0.18
SEC13-209ENST00000397117 ABL1P00519 1130 aa13.94□□□□□ -0.18
SEC13-209ENST00000397117 CALB1P05937 261 aa13.94□□□□□ -0.18
SEC13-209ENST00000397117 HNRNPA1P09651 372 aaKnown RBP eCLIP13.94□□□□□ -0.18
SEC13-209ENST00000397117 TNNT1P13805 278 aa13.94□□□□□ -0.18
SEC13-209ENST00000397117 NTHL1P78549 312 aa13.94□□□□□ -0.18
SEC13-209ENST00000397117 C1QBPQ07021 282 aaKnown RBP13.94□□□□□ -0.18
SEC13-209ENST00000397117 IFI16Q16666 785 aaKnown RBP13.94□□□□□ -0.18
SEC13-209ENST00000397117 ZNF528Q3MIS6 628 aa13.94□□□□□ -0.18
SEC13-209ENST00000397117 ERICH1Q86X53 443 aa13.94□□□□□ -0.18
SEC13-209ENST00000397117 PHF13Q86YI8 300 aaPredicted RBP13.94□□□□□ -0.18
SEC13-209ENST00000397117 MCOLN2Q8IZK6 566 aa13.94□□□□□ -0.18
SEC13-209ENST00000397117 RNF10Q8N5U6 811 aaKnown RBP13.94□□□□□ -0.18
SEC13-209ENST00000397117 SLC2A14Q8TDB8 520 aa13.94□□□□□ -0.18
SEC13-209ENST00000397117 PIK3R5Q8WYR1 880 aa13.94□□□□□ -0.18
SEC13-209ENST00000397117 VCPIP1Q96JH7 1222 aa13.94□□□□□ -0.18
SEC13-209ENST00000397117 SYNCQ9H7C4 482 aa13.94□□□□□ -0.18
SEC13-209ENST00000397117 MYO1AQ9UBC5 1043 aa13.94□□□□□ -0.18
SEC13-209ENST00000397117 PAXBP1Q9Y5B6 917 aa13.94□□□□□ -0.18
SEC13-209ENST00000397117 SPTBN2O15020 2390 aa13.94□□□□□ -0.18
SEC13-209ENST00000397117 A0A0A6YYK5 440 aaPredicted RBP13.93□□□□□ -0.18
SEC13-209ENST00000397117 OAZ2O95190 189 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 BCAT1P54687 386 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 MAPRE1Q15691 268 aaKnown RBP13.93□□□□□ -0.18
SEC13-209ENST00000397117 SLC44A4Q53GD3 710 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 INTS6LQ5JSJ4 861 aaKnown RBP13.93□□□□□ -0.18
SEC13-209ENST00000397117 ZNF569Q5MCW4 686 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 VARS2Q5ST30 1063 aaKnown RBP13.93□□□□□ -0.18
SEC13-209ENST00000397117 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.93□□□□□ -0.18
SEC13-209ENST00000397117 MMS22LQ6ZRQ5 1243 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 MON1BQ7L1V2 547 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 RHOT2Q8IXI1 618 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 WDTC1Q8N5D0 677 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 ANKRD52Q8NB46 1076 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 MYCBPAPQ8TBZ2 947 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 RFFLQ8WZ73 363 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 FGF13Q92913 245 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 ALS2CR12Q96Q35 445 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 HNRNPABQ99729 332 aaKnown RBP13.93□□□□□ -0.18
SEC13-209ENST00000397117 C11orf70Q9BRQ4 267 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 TTPALQ9BTX7 342 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 OSBPL6Q9BZF3 934 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 IRX2Q9BZI1 471 aaPredicted RBP13.93□□□□□ -0.18
SEC13-209ENST00000397117 CRTAC1Q9NQ79 661 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 CTTNBP2NLQ9P2B4 639 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 CNOT8Q9UFF9 292 aaKnown RBP13.93□□□□□ -0.18
SEC13-209ENST00000397117 GTF3C4Q9UKN8 822 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 FBXO4Q9UKT5 387 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 MTF2Q9Y483 593 aaPredicted RBP13.93□□□□□ -0.18
SEC13-209ENST00000397117 NCANO14594 1321 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 MYBPHLA2RUH7 354 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 BUB1O43683 1085 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 SETSIPP0DME0 302 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 FGFR3P22607 806 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 MMP8P22894 467 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 HOXA9P31269 272 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 GPD2P43304 727 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 SNX16P57768 344 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 ETF1P62495 437 aaKnown RBP13.93□□□□□ -0.18
SEC13-209ENST00000397117 PRKCQQ04759 706 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 BST2Q10589 180 aaKnown RBP13.93□□□□□ -0.18
SEC13-209ENST00000397117 MLF2Q15773 248 aaPredicted RBP13.93□□□□□ -0.18
SEC13-209ENST00000397117 ZNF280DQ6N043 979 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 MTSS1LQ765P7 747 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 OR10T2Q8NGX3 314 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 ITFG1Q8TB96 612 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms