RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 LMO3Q8TAP4 145 aa15.36■□□□□ 0.05
SEC13-208ENST00000397109 THAP9Q9H5L6 903 aa15.36■□□□□ 0.05
SEC13-208ENST00000397109 ECT2Q9H8V3 914 aa15.36■□□□□ 0.05
SEC13-208ENST00000397109 FAM86C1Q9NVL1 165 aa15.36■□□□□ 0.05
SEC13-208ENST00000397109 FBXO4Q9UKT5 387 aa15.36■□□□□ 0.05
SEC13-208ENST00000397109 HELZP42694 1942 aaKnown RBP15.36■□□□□ 0.05
SEC13-208ENST00000397109 COCHO43405 550 aa15.35■□□□□ 0.05
SEC13-208ENST00000397109 NFATC1O95644 943 aa15.35■□□□□ 0.05
SEC13-208ENST00000397109 PTMAP06454 111 aaKnown RBP15.35■□□□□ 0.05
SEC13-208ENST00000397109 VDRP11473 427 aa15.35■□□□□ 0.05
SEC13-208ENST00000397109 ARSAP15289 507 aa15.35■□□□□ 0.05
SEC13-208ENST00000397109 NBL1P41271 181 aa15.35■□□□□ 0.05
SEC13-208ENST00000397109 KIF11P52732 1056 aa15.35■□□□□ 0.05
SEC13-208ENST00000397109 EML3Q32P44 896 aa15.35■□□□□ 0.05
SEC13-208ENST00000397109 SGO2Q562F6 1265 aa15.35■□□□□ 0.05
SEC13-208ENST00000397109 TXNDC11Q6PKC3 985 aa15.35■□□□□ 0.05
SEC13-208ENST00000397109 IRF2BP1Q8IU81 584 aa15.35■□□□□ 0.05
SEC13-208ENST00000397109 SYNPOQ8N3V7 929 aa15.35■□□□□ 0.05
SEC13-208ENST00000397109 UBR7Q8N806 425 aa15.35■□□□□ 0.05
SEC13-208ENST00000397109 JAKMIP2Q96AA8 810 aa15.35■□□□□ 0.05
SEC13-208ENST00000397109 CNOT6LQ96LI5 555 aaKnown RBP15.35■□□□□ 0.05
SEC13-208ENST00000397109 TRIM5Q9C035 493 aa15.35■□□□□ 0.05
SEC13-208ENST00000397109 NFE2L3Q9Y4A8 694 aa15.35■□□□□ 0.05
SEC13-208ENST00000397109 WNT6Q9Y6F9 365 aa15.35■□□□□ 0.05
SEC13-208ENST00000397109 PROB1E7EW31 1015 aa15.34■□□□□ 0.05
SEC13-208ENST00000397109 TLR5O60602 858 aa15.34■□□□□ 0.05
SEC13-208ENST00000397109 PAEPP09466 180 aa15.34■□□□□ 0.05
SEC13-208ENST00000397109 CD19P15391 556 aa15.34■□□□□ 0.05
SEC13-208ENST00000397109 MSNP26038 577 aaKnown RBP15.34■□□□□ 0.05
SEC13-208ENST00000397109 PSEN1P49768 467 aa15.34■□□□□ 0.05
SEC13-208ENST00000397109 ZNF75DP51815 510 aa15.34■□□□□ 0.05
SEC13-208ENST00000397109 ZXDBP98169 803 aa15.34■□□□□ 0.05
SEC13-208ENST00000397109 GCNT1Q02742 428 aa15.34■□□□□ 0.05
SEC13-208ENST00000397109 PPP2R5DQ14738 602 aa15.34■□□□□ 0.05
SEC13-208ENST00000397109 PON2Q15165 354 aa15.34■□□□□ 0.05
SEC13-208ENST00000397109 ZNF528Q3MIS6 628 aa15.34■□□□□ 0.05
SEC13-208ENST00000397109 CDKAL1Q5VV42 579 aa15.34■□□□□ 0.05
SEC13-208ENST00000397109 GPRIN1Q7Z2K8 1008 aa15.34■□□□□ 0.05
SEC13-208ENST00000397109 CREBRFQ8IUR6 639 aa15.34■□□□□ 0.05
SEC13-208ENST00000397109 FAM114A1Q8IWE2 563 aa15.34■□□□□ 0.05
SEC13-208ENST00000397109 NACA2Q9H009 215 aa15.34■□□□□ 0.05
SEC13-208ENST00000397109 SMPD4Q9NXE4 827 aa15.34■□□□□ 0.05
SEC13-208ENST00000397109 TBC1D14Q9P2M4 693 aa15.34■□□□□ 0.05
SEC13-208ENST00000397109 HESX1Q9UBX0 185 aa15.34■□□□□ 0.05
SEC13-208ENST00000397109 ZKSCAN5Q9Y2L8 839 aa15.34■□□□□ 0.05
SEC13-208ENST00000397109 PCDHB4Q9Y5E5 795 aa15.34■□□□□ 0.05
SEC13-208ENST00000397109 PATJQ8NI35 1801 aa15.34■□□□□ 0.05
SEC13-208ENST00000397109 E2F8A0AVK6 867 aa15.33■□□□□ 0.05
SEC13-208ENST00000397109 TRDMT1O14717 391 aaKnown RBP15.33■□□□□ 0.05
SEC13-208ENST00000397109 SP9P0CG40 484 aa15.33■□□□□ 0.05
SEC13-208ENST00000397109 BCAT1P54687 386 aa15.33■□□□□ 0.05
SEC13-208ENST00000397109 GRSF1Q12849 480 aaKnown RBP eCLIP15.33■□□□□ 0.05
SEC13-208ENST00000397109 ZC3H14Q6PJT7 736 aaKnown RBP15.33■□□□□ 0.05
SEC13-208ENST00000397109 TMEM270Q6UE05 265 aa15.33■□□□□ 0.05
SEC13-208ENST00000397109 CCDC186Q7Z3E2 898 aa15.33■□□□□ 0.05
SEC13-208ENST00000397109 TADA2BQ86TJ2 420 aa15.33■□□□□ 0.05
SEC13-208ENST00000397109 ALYREFQ86V81 257 aaKnown RBP15.33■□□□□ 0.05
SEC13-208ENST00000397109 AOPEPQ8N6M6 819 aa15.33■□□□□ 0.05
SEC13-208ENST00000397109 FAM81BQ96LP2 452 aa15.33■□□□□ 0.05
SEC13-208ENST00000397109 PHOX2BQ99453 314 aa15.33■□□□□ 0.05
SEC13-208ENST00000397109 HSD3B7Q9H2F3 369 aa15.33■□□□□ 0.05
SEC13-208ENST00000397109 LINC00597Q9H2U6 94 aa15.33■□□□□ 0.05
SEC13-208ENST00000397109 SEMA4AQ9H3S1 761 aa15.33■□□□□ 0.05
SEC13-208ENST00000397109 CCSER2Q9H7U1 834 aa15.33■□□□□ 0.05
SEC13-208ENST00000397109 CYLDQ9NQC7 956 aa15.33■□□□□ 0.05
SEC13-208ENST00000397109 CFAP97Q9P2B7 532 aa15.33■□□□□ 0.05
SEC13-208ENST00000397109 TSPAN16Q9UKR8 245 aa15.33■□□□□ 0.05
SEC13-208ENST00000397109 USP3Q9Y6I4 520 aa15.33■□□□□ 0.05
SEC13-208ENST00000397109 OTOL1A6NHN0 477 aaPredicted RBP15.33■□□□□ 0.04
SEC13-208ENST00000397109 AP5Z1O43299 807 aa15.33■□□□□ 0.04
SEC13-208ENST00000397109 ZNF18P17022 549 aa15.33■□□□□ 0.04
SEC13-208ENST00000397109 GJA4P35212 333 aa15.33■□□□□ 0.04
SEC13-208ENST00000397109 ATP5C1P36542 298 aaKnown RBP15.33■□□□□ 0.04
SEC13-208ENST00000397109 MTIF2P46199 727 aaKnown RBP15.33■□□□□ 0.04
SEC13-208ENST00000397109 CCR3P51677 355 aa15.33■□□□□ 0.04
SEC13-208ENST00000397109 BST2Q10589 180 aaKnown RBP15.33■□□□□ 0.04
SEC13-208ENST00000397109 MTAPQ13126 283 aa15.33■□□□□ 0.04
SEC13-208ENST00000397109 CCINQ13939 588 aa15.33■□□□□ 0.04
SEC13-208ENST00000397109 STILQ15468 1287 aa15.33■□□□□ 0.04
SEC13-208ENST00000397109 GOLGA7BQ2TAP0 167 aa15.33■□□□□ 0.04
SEC13-208ENST00000397109 TMEM196Q5HYL7 178 aa15.33■□□□□ 0.04
SEC13-208ENST00000397109 KLHDC10Q6PID8 442 aa15.33■□□□□ 0.04
SEC13-208ENST00000397109 PIGZQ86VD9 579 aa15.33■□□□□ 0.04
SEC13-208ENST00000397109 MAML2Q8IZL2 1156 aaPredicted RBP15.33■□□□□ 0.04
SEC13-208ENST00000397109 ARHGAP18Q8N392 663 aa15.33■□□□□ 0.04
SEC13-208ENST00000397109 SPEM1Q8N4L4 309 aa15.33■□□□□ 0.04
SEC13-208ENST00000397109 ZNF276Q8N554 614 aa15.33■□□□□ 0.04
SEC13-208ENST00000397109 OTUB2Q96DC9 234 aa15.33■□□□□ 0.04
SEC13-208ENST00000397109 CDK5RAP1Q96SZ6 601 aaKnown RBP15.33■□□□□ 0.04
SEC13-208ENST00000397109 INTS2Q9H0H0 1204 aaKnown RBP15.33■□□□□ 0.04
SEC13-208ENST00000397109 SH3BP1Q9Y3L3 701 aa15.33■□□□□ 0.04
SEC13-208ENST00000397109 GTPBP10A4D1E9 387 aaKnown RBP15.32■□□□□ 0.04
SEC13-208ENST00000397109 XPO1O14980 1071 aaKnown RBP15.32■□□□□ 0.04
SEC13-208ENST00000397109 CYP26A1O43174 497 aa15.32■□□□□ 0.04
SEC13-208ENST00000397109 SETSIPP0DME0 302 aa15.32■□□□□ 0.04
SEC13-208ENST00000397109 RALAP11233 206 aa15.32■□□□□ 0.04
SEC13-208ENST00000397109 PRKCSHP14314 528 aaPredicted RBP15.32■□□□□ 0.04
SEC13-208ENST00000397109 DRD1P21728 446 aa15.32■□□□□ 0.04
SEC13-208ENST00000397109 EEF1GP26641 437 aaKnown RBP15.32■□□□□ 0.04
SEC13-208ENST00000397109 CLCN1P35523 988 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms