RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 HSFX1Q9UBD0 423 aa24.95■■□□□ 1.59
CSNK1E-203ENST00000396832 SMIM31A0A1B0GVY4 71 aa24.95■■□□□ 1.58
CSNK1E-203ENST00000396832 PRR5-ARHGAP8B1AHC4 643 aa24.95■■□□□ 1.58
CSNK1E-203ENST00000396832 NR3C2P08235 984 aa24.95■■□□□ 1.58
CSNK1E-203ENST00000396832 ITGA2BP08514 1039 aa24.95■■□□□ 1.58
CSNK1E-203ENST00000396832 CD19P15391 556 aa24.95■■□□□ 1.58
CSNK1E-203ENST00000396832 AQP4P55087 323 aa24.95■■□□□ 1.58
CSNK1E-203ENST00000396832 MCCD1P59942 119 aaPredicted RBP24.95■■□□□ 1.58
CSNK1E-203ENST00000396832 ARHGAP8P85298 464 aa24.95■■□□□ 1.58
CSNK1E-203ENST00000396832 DLG1Q12959 904 aa24.95■■□□□ 1.58
CSNK1E-203ENST00000396832 AAGABQ6PD74 315 aa24.95■■□□□ 1.58
CSNK1E-203ENST00000396832 KYAT3Q6YP21 454 aaKnown RBP24.95■■□□□ 1.58
CSNK1E-203ENST00000396832 RNF111Q6ZNA4 994 aa24.95■■□□□ 1.58
CSNK1E-203ENST00000396832 DPH6Q7L8W6 267 aa24.95■■□□□ 1.58
CSNK1E-203ENST00000396832 RBM12BQ8IXT5 1001 aaKnown RBP24.95■■□□□ 1.58
CSNK1E-203ENST00000396832 KIAA0319LQ8IZA0 1049 aa24.95■■□□□ 1.58
CSNK1E-203ENST00000396832 NAT8LQ8N9F0 302 aa24.95■■□□□ 1.58
CSNK1E-203ENST00000396832 ATP6V0A1Q93050 837 aa24.95■■□□□ 1.58
CSNK1E-203ENST00000396832 ATG4CQ96DT6 458 aa24.95■■□□□ 1.58
CSNK1E-203ENST00000396832 TCHPQ9BT92 498 aa24.95■■□□□ 1.58
CSNK1E-203ENST00000396832 CCDC106Q9BWC9 280 aa24.95■■□□□ 1.58
CSNK1E-203ENST00000396832 SLC38A10Q9HBR0 1119 aa24.95■■□□□ 1.58
CSNK1E-203ENST00000396832 A0A088AWK7 358 aa24.94■■□□□ 1.58
CSNK1E-203ENST00000396832 ARHGAP42A6NI28 874 aa24.94■■□□□ 1.58
CSNK1E-203ENST00000396832 KBTBD13C9JR72 458 aa24.94■■□□□ 1.58
CSNK1E-203ENST00000396832 K7ERI5 159 aa24.94■■□□□ 1.58
CSNK1E-203ENST00000396832 STBD1O95210 358 aa24.94■■□□□ 1.58
CSNK1E-203ENST00000396832 ASNSP08243 561 aa24.94■■□□□ 1.58
CSNK1E-203ENST00000396832 PIM1P11309 404 aaPredicted RBP24.94■■□□□ 1.58
CSNK1E-203ENST00000396832 RAP1GAPP47736 663 aa24.94■■□□□ 1.58
CSNK1E-203ENST00000396832 PDE1BQ01064 536 aa24.94■■□□□ 1.58
CSNK1E-203ENST00000396832 CDHR3Q6ZTQ4 885 aa24.94■■□□□ 1.58
CSNK1E-203ENST00000396832 CDR2LQ86X02 465 aaPredicted RBP24.94■■□□□ 1.58
CSNK1E-203ENST00000396832 DEPTORQ8TB45 409 aa24.94■■□□□ 1.58
CSNK1E-203ENST00000396832 WWP1Q9H0M0 922 aa24.94■■□□□ 1.58
CSNK1E-203ENST00000396832 FZD1Q9UP38 647 aa24.94■■□□□ 1.58
CSNK1E-203ENST00000396832 MEI4A8MW99 385 aa24.94■■□□□ 1.58
CSNK1E-203ENST00000396832 STIP1P31948 543 aaKnown RBP24.94■■□□□ 1.58
CSNK1E-203ENST00000396832 AQP5P55064 265 aa24.94■■□□□ 1.58
CSNK1E-203ENST00000396832 BST1Q10588 318 aa24.94■■□□□ 1.58
CSNK1E-203ENST00000396832 RFX6Q8HWS3 928 aa24.94■■□□□ 1.58
CSNK1E-203ENST00000396832 KLHL4Q9C0H6 718 aa24.94■■□□□ 1.58
CSNK1E-203ENST00000396832 IQCGQ9H095 443 aaKnown RBP24.94■■□□□ 1.58
CSNK1E-203ENST00000396832 hCG_2014768A0A024R1R8 64 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 PFDN1O60925 122 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 RGS20O76081 388 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 TMPRSS15P98073 1019 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 MMRN1Q13201 1228 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 MMEL1Q495T6 779 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 WDTC1Q8N5D0 677 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 ARFGAP1Q8N6T3 406 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 MCPH1Q8NEM0 835 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 SLC35B2Q8TB61 432 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 IMPG2Q9BZV3 1241 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 JPH1Q9HDC5 661 aaPredicted RBP24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 RNF146Q9NTX7 359 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 ADAMTS6Q9UKP5 1117 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 PGM3O95394 542 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 RAB6CQ53S08 254 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 RILPQ96NA2 401 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 SRPK1Q96SB4 655 aaKnown RBP24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 SLC13A1Q9BZW2 595 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 RAB6CQ9H0N0 254 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 SLC9A2Q9UBY0 812 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 E7ESA3 106 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 COPEO14579 308 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 STAM2O75886 525 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 INHBAP08476 426 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 ACTR2P61160 394 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 IRX4P78413 519 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 BMPR2Q13873 1038 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 HIC1Q14526 733 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 PDK3Q15120 406 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 EFHC1Q5JVL4 640 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 SLC26A7Q8TE54 656 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 DGCR14Q96DF8 476 aaKnown RBP24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 VCPIP1Q96JH7 1222 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 DNAJC1Q96KC8 554 aaKnown RBP24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 C7orf26Q96N11 449 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 C1orf21Q9H246 121 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 SMYD3Q9H7B4 428 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 ZNF277Q9NRM2 450 aaPredicted RBP24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 CISHQ9NSE2 258 aa24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 NXF1Q9UBU9 619 aaKnown RBP24.93■■□□□ 1.58
CSNK1E-203ENST00000396832 ZNF646O15015 1829 aaPredicted RBP24.92■■□□□ 1.58
CSNK1E-203ENST00000396832 ATP9BO43861 1147 aa24.92■■□□□ 1.58
CSNK1E-203ENST00000396832 TOP3BO95985 862 aaKnown RBP24.92■■□□□ 1.58
CSNK1E-203ENST00000396832 UBAP2LQ14157 1087 aaKnown RBP24.92■■□□□ 1.58
CSNK1E-203ENST00000396832 SH2D4BQ5SQS7 431 aa24.92■■□□□ 1.58
CSNK1E-203ENST00000396832 PDIK1LQ8N165 341 aa24.92■■□□□ 1.58
CSNK1E-203ENST00000396832 GDPD5Q8WTR4 605 aa24.92■■□□□ 1.58
CSNK1E-203ENST00000396832 TCRBV9S1A1TA0A576 114 aa24.92■■□□□ 1.58
CSNK1E-203ENST00000396832 TXNDC9O14530 226 aa24.92■■□□□ 1.58
CSNK1E-203ENST00000396832 CYB561D2O14569 222 aa24.92■■□□□ 1.58
CSNK1E-203ENST00000396832 LRCH4O75427 683 aa24.92■■□□□ 1.58
CSNK1E-203ENST00000396832 ZNF200P98182 395 aaPredicted RBP24.92■■□□□ 1.58
CSNK1E-203ENST00000396832 SLC25A3Q00325 362 aa24.92■■□□□ 1.58
CSNK1E-203ENST00000396832 CCDC33Q8N5R6 958 aa24.92■■□□□ 1.58
CSNK1E-203ENST00000396832 PLEKHG4BQ96PX9 1271 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms