RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 TXNDC5Q8NBS9 432 aaKnown RBP17.31■□□□□ 0.36
DDR1-229ENST00000396342 SCAMP5Q8TAC9 235 aa17.31■□□□□ 0.36
DDR1-229ENST00000396342 TMEM174Q8WUU8 243 aa17.31■□□□□ 0.36
DDR1-229ENST00000396342 FAM49BQ9NUQ9 324 aa17.31■□□□□ 0.36
DDR1-229ENST00000396342 DMAC2Q9NW81 257 aa17.31■□□□□ 0.36
DDR1-229ENST00000396342 ANGPTL2Q9UKU9 493 aa17.31■□□□□ 0.36
DDR1-229ENST00000396342 INVSQ9Y283 1065 aa17.31■□□□□ 0.36
DDR1-229ENST00000396342 PCDHA5Q9Y5H7 936 aa17.31■□□□□ 0.36
DDR1-229ENST00000396342 DMDP11532 3685 aa17.31■□□□□ 0.36
DDR1-229ENST00000396342 BCLAF3A2AJT9 711 aaKnown RBP17.3■□□□□ 0.36
DDR1-229ENST00000396342 DCLK1O15075 740 aa17.3■□□□□ 0.36
DDR1-229ENST00000396342 HLA-DRAP01903 254 aa17.3■□□□□ 0.36
DDR1-229ENST00000396342 CCDC130P13994 396 aa17.3■□□□□ 0.36
DDR1-229ENST00000396342 PSEN1P49768 467 aa17.3■□□□□ 0.36
DDR1-229ENST00000396342 CACNA2D1P54289 1103 aa17.3■□□□□ 0.36
DDR1-229ENST00000396342 C10orf76Q5T2E6 689 aa17.3■□□□□ 0.36
DDR1-229ENST00000396342 SNX30Q5VWJ9 437 aa17.3■□□□□ 0.36
DDR1-229ENST00000396342 GRAMD4Q6IC98 578 aa17.3■□□□□ 0.36
DDR1-229ENST00000396342 ZNF513Q8N8E2 541 aaPredicted RBP17.3■□□□□ 0.36
DDR1-229ENST00000396342 KIAA0895Q8NCT3 520 aa17.3■□□□□ 0.36
DDR1-229ENST00000396342 HMGB4Q8WW32 186 aa17.3■□□□□ 0.36
DDR1-229ENST00000396342 JAKMIP2Q96AA8 810 aa17.3■□□□□ 0.36
DDR1-229ENST00000396342 CNTNAP3BQ96NU0 1288 aa17.3■□□□□ 0.36
DDR1-229ENST00000396342 NUSAP1Q9BXS6 441 aaKnown RBP17.3■□□□□ 0.36
DDR1-229ENST00000396342 CNTNAP3Q9BZ76 1288 aa17.3■□□□□ 0.36
DDR1-229ENST00000396342 CCSER2Q9H7U1 834 aa17.3■□□□□ 0.36
DDR1-229ENST00000396342 SPHK2Q9NRA0 654 aa17.3■□□□□ 0.36
DDR1-229ENST00000396342 POLR3BQ9NW08 1133 aaPredicted RBP17.3■□□□□ 0.36
DDR1-229ENST00000396342 TRAF3IP3Q9Y228 551 aa17.3■□□□□ 0.36
DDR1-229ENST00000396342 ANK1P16157 1881 aa17.3■□□□□ 0.36
DDR1-229ENST00000396342 HOXC11O43248 304 aaPredicted RBP17.29■□□□□ 0.36
DDR1-229ENST00000396342 ASS1P00966 412 aaKnown RBP17.29■□□□□ 0.36
DDR1-229ENST00000396342 ACO1P21399 889 aaKnown RBP17.29■□□□□ 0.36
DDR1-229ENST00000396342 SLC6A11P48066 632 aa17.29■□□□□ 0.36
DDR1-229ENST00000396342 ATXN3P54252 364 aaPredicted RBP17.29■□□□□ 0.36
DDR1-229ENST00000396342 LMAN2Q12907 356 aa17.29■□□□□ 0.36
DDR1-229ENST00000396342 ADAM9Q13443 819 aa17.29■□□□□ 0.36
DDR1-229ENST00000396342 PLA2G2CQ5R387 149 aa17.29■□□□□ 0.36
DDR1-229ENST00000396342 PMS2CLQ68D20 193 aa17.29■□□□□ 0.36
DDR1-229ENST00000396342 SLC36A4Q6YBV0 504 aa17.29■□□□□ 0.36
DDR1-229ENST00000396342 RABEPKQ7Z6M1 372 aa17.29■□□□□ 0.36
DDR1-229ENST00000396342 FUKQ8N0W3 1084 aa17.29■□□□□ 0.36
DDR1-229ENST00000396342 ARHGAP18Q8N392 663 aa17.29■□□□□ 0.36
DDR1-229ENST00000396342 NAT16Q8N8M0 369 aa17.29■□□□□ 0.36
DDR1-229ENST00000396342 PIGKQ92643 395 aa17.29■□□□□ 0.36
DDR1-229ENST00000396342 CYFIP2Q96F07 1278 aa17.29■□□□□ 0.36
DDR1-229ENST00000396342 TSG101Q99816 390 aa17.29■□□□□ 0.36
DDR1-229ENST00000396342 NIF3L1Q9GZT8 377 aa17.29■□□□□ 0.36
DDR1-229ENST00000396342 KCTD10Q9H3F6 313 aa17.29■□□□□ 0.36
DDR1-229ENST00000396342 MMRN2Q9H8L6 949 aa17.29■□□□□ 0.36
DDR1-229ENST00000396342 TMEM9BQ9NQ34 198 aa17.29■□□□□ 0.36
DDR1-229ENST00000396342 RMND1Q9NWS8 449 aa17.29■□□□□ 0.36
DDR1-229ENST00000396342 HOOK1Q9UJC3 728 aaKnown RBP17.29■□□□□ 0.36
DDR1-229ENST00000396342 DNMT3LQ9UJW3 386 aa17.29■□□□□ 0.36
DDR1-229ENST00000396342 ZNF510Q9Y2H8 683 aa17.29■□□□□ 0.36
DDR1-229ENST00000396342 TCRBV21S2A2A0A5A6 115 aa17.28■□□□□ 0.36
DDR1-229ENST00000396342 KLRC4O43908 158 aa17.28■□□□□ 0.36
DDR1-229ENST00000396342 VNN1O95497 513 aa17.28■□□□□ 0.36
DDR1-229ENST00000396342 EPB41P11171 864 aaKnown RBP17.28■□□□□ 0.36
DDR1-229ENST00000396342 CD58P19256 250 aa17.28■□□□□ 0.36
DDR1-229ENST00000396342 GTF2H1P32780 548 aa17.28■□□□□ 0.36
DDR1-229ENST00000396342 PLA2G4AP47712 749 aa17.28■□□□□ 0.36
DDR1-229ENST00000396342 ENPEPQ07075 957 aa17.28■□□□□ 0.36
DDR1-229ENST00000396342 SPDYCQ5MJ68 293 aa17.28■□□□□ 0.36
DDR1-229ENST00000396342 C10orf120Q5SQS8 335 aa17.28■□□□□ 0.36
DDR1-229ENST00000396342 RASSF3Q86WH2 238 aa17.28■□□□□ 0.36
DDR1-229ENST00000396342 IL17RCQ8NAC3 791 aa17.28■□□□□ 0.36
DDR1-229ENST00000396342 HEXIM2Q96MH2 286 aaKnown RBP17.28■□□□□ 0.36
DDR1-229ENST00000396342 HNRNPABQ99729 332 aaKnown RBP17.28■□□□□ 0.36
DDR1-229ENST00000396342 BBS2Q9BXC9 721 aa17.28■□□□□ 0.36
DDR1-229ENST00000396342 GTPBP4Q9BZE4 634 aaKnown RBP17.28■□□□□ 0.36
DDR1-229ENST00000396342 PNPLA8Q9NP80 782 aa17.28■□□□□ 0.36
DDR1-229ENST00000396342 DNAJC17Q9NVM6 304 aaKnown RBP17.28■□□□□ 0.36
DDR1-229ENST00000396342 IL37Q9NZH6 218 aa17.28■□□□□ 0.36
DDR1-229ENST00000396342 NAGPAQ9UK23 515 aa17.28■□□□□ 0.36
DDR1-229ENST00000396342 STRIP2Q9ULQ0 834 aa17.28■□□□□ 0.36
DDR1-229ENST00000396342 SCML2Q9UQR0 700 aa17.28■□□□□ 0.36
DDR1-229ENST00000396342 NEDD8-MDP1E9PL57 170 aa17.27■□□□□ 0.36
DDR1-229ENST00000396342 TNFRSF10BO14763 440 aa17.27■□□□□ 0.36
DDR1-229ENST00000396342 CETN3O15182 167 aa17.27■□□□□ 0.36
DDR1-229ENST00000396342 AP5Z1O43299 807 aa17.27■□□□□ 0.36
DDR1-229ENST00000396342 RHOBTB3O94955 611 aa17.27■□□□□ 0.36
DDR1-229ENST00000396342 HOXC13P31276 330 aa17.27■□□□□ 0.36
DDR1-229ENST00000396342 GCLMP48507 274 aa17.27■□□□□ 0.36
DDR1-229ENST00000396342 DLG4P78352 724 aa17.27■□□□□ 0.36
DDR1-229ENST00000396342 ZXDBP98169 803 aa17.27■□□□□ 0.36
DDR1-229ENST00000396342 ORC1Q13415 861 aa17.27■□□□□ 0.36
DDR1-229ENST00000396342 KRT39Q6A163 491 aa17.27■□□□□ 0.36
DDR1-229ENST00000396342 HTR3DQ70Z44 454 aa17.27■□□□□ 0.36
DDR1-229ENST00000396342 RSRC2Q7L4I2 434 aaKnown RBP17.27■□□□□ 0.36
DDR1-229ENST00000396342 BBS7Q8IWZ6 715 aa17.27■□□□□ 0.36
DDR1-229ENST00000396342 CHPFQ8IZ52 775 aa17.27■□□□□ 0.36
DDR1-229ENST00000396342 GUF1Q8N442 669 aaKnown RBP17.27■□□□□ 0.36
DDR1-229ENST00000396342 MDGA1Q8NFP4 955 aa17.27■□□□□ 0.36
DDR1-229ENST00000396342 PLEKHO2Q8TD55 490 aa17.27■□□□□ 0.36
DDR1-229ENST00000396342 EZH1Q92800 747 aaPredicted RBP17.27■□□□□ 0.36
DDR1-229ENST00000396342 SMOQ99835 787 aa17.27■□□□□ 0.36
DDR1-229ENST00000396342 DUSP9Q99956 384 aaKnown RBP17.27■□□□□ 0.36
DDR1-229ENST00000396342 DCLK3Q9C098 648 aa17.27■□□□□ 0.36
DDR1-229ENST00000396342 SMOC1Q9H4F8 434 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms