RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 TRMT13Q9NUP7 481 aaKnown RBP12.68□□□□□ -0.38
ITGB1-202ENST00000396033 MGEA5O60502 916 aa12.67□□□□□ -0.38
ITGB1-202ENST00000396033 NPR3P17342 541 aa12.67□□□□□ -0.38
ITGB1-202ENST00000396033 TFE3P19532 575 aaPredicted RBP12.67□□□□□ -0.38
ITGB1-202ENST00000396033 MDH1P40925 334 aaKnown RBP12.67□□□□□ -0.38
ITGB1-202ENST00000396033 PTPN9P43378 593 aa12.67□□□□□ -0.38
ITGB1-202ENST00000396033 ADIGQ0VDE8 80 aa12.67□□□□□ -0.38
ITGB1-202ENST00000396033 NPNTQ6UXI9 565 aa12.67□□□□□ -0.38
ITGB1-202ENST00000396033 GABRDO14764 452 aa12.67□□□□□ -0.38
ITGB1-202ENST00000396033 NDC80O14777 642 aa12.67□□□□□ -0.38
ITGB1-202ENST00000396033 KIF3CO14782 793 aa12.67□□□□□ -0.38
ITGB1-202ENST00000396033 IVLP07476 585 aa12.67□□□□□ -0.38
ITGB1-202ENST00000396033 RAB27AP51159 221 aa12.67□□□□□ -0.38
ITGB1-202ENST00000396033 MORF4L2Q15014 288 aa12.67□□□□□ -0.38
ITGB1-202ENST00000396033 RNF157Q96PX1 679 aa12.67□□□□□ -0.38
ITGB1-202ENST00000396033 RABEP2Q9H5N1 569 aa12.67□□□□□ -0.38
ITGB1-202ENST00000396033 TIMM13Q9Y5L4 95 aaPredicted RBP12.67□□□□□ -0.38
ITGB1-202ENST00000396033 THSD7BQ9C0I4 1608 aa12.67□□□□□ -0.38
ITGB1-202ENST00000396033 RBP3P10745 1247 aa12.67□□□□□ -0.38
ITGB1-202ENST00000396033 ROR1Q01973 937 aa12.67□□□□□ -0.38
ITGB1-202ENST00000396033 ITGA7Q13683 1181 aa12.67□□□□□ -0.38
ITGB1-202ENST00000396033 LPIN1Q14693 890 aa12.67□□□□□ -0.38
ITGB1-202ENST00000396033 CA9Q16790 459 aa12.67□□□□□ -0.38
ITGB1-202ENST00000396033 LONRF1Q17RB8 773 aa12.67□□□□□ -0.38
ITGB1-202ENST00000396033 RNASEH2BQ5TBB1 312 aaKnown RBP12.67□□□□□ -0.38
ITGB1-202ENST00000396033 MRPL10Q7Z7H8 261 aaKnown RBP12.67□□□□□ -0.38
ITGB1-202ENST00000396033 C3orf58Q8NDZ4 430 aa12.67□□□□□ -0.38
ITGB1-202ENST00000396033 P3H4Q92791 437 aa12.67□□□□□ -0.38
ITGB1-202ENST00000396033 C9orf72Q96LT7 481 aa12.67□□□□□ -0.38
ITGB1-202ENST00000396033 PCDH18Q9HCL0 1135 aa12.67□□□□□ -0.38
ITGB1-202ENST00000396033 MDM4O15151 490 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 FAM163BP0C2L3 166 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 PPP6R3Q5H9R7 873 aaPredicted RBP12.66□□□□□ -0.38
ITGB1-202ENST00000396033 C1orf228Q6PIY5 440 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 RNF180Q86T96 592 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 TMEM86AQ8N2M4 240 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 GPATCH11Q8N954 259 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 FAM149B1Q96BN6 582 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 CAPNS2Q96L46 248 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 SYT15Q9BQS2 421 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 ROPN1BQ9BZX4 212 aaPredicted RBP12.66□□□□□ -0.38
ITGB1-202ENST00000396033 STMN4Q9H169 189 aaPredicted RBP12.66□□□□□ -0.38
ITGB1-202ENST00000396033 ROPN1Q9HAT0 212 aaPredicted RBP12.66□□□□□ -0.38
ITGB1-202ENST00000396033 SAYSD1Q9NPB0 183 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 KRT82Q9NSB4 513 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.66□□□□□ -0.38
ITGB1-202ENST00000396033 CWC15Q9P013 229 aaKnown RBP12.66□□□□□ -0.38
ITGB1-202ENST00000396033 SRRDQ9UH36 339 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 DDX20Q9UHI6 824 aaKnown RBP12.66□□□□□ -0.38
ITGB1-202ENST00000396033 AGTP01019 485 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 LSP1P33241 339 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 LHX1P48742 406 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 ATXN1P54253 815 aaKnown RBP12.66□□□□□ -0.38
ITGB1-202ENST00000396033 PTK7Q13308 1070 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 NOMO1Q15155 1222 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 EFHC1Q5JVL4 640 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 SWT1Q5T5J6 900 aaKnown RBP12.66□□□□□ -0.38
ITGB1-202ENST00000396033 KIAA0319Q5VV43 1072 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 DARS2Q6PI48 645 aaKnown RBP12.66□□□□□ -0.38
ITGB1-202ENST00000396033 ARCQ7LC44 396 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 ZC3H18Q86VM9 953 aaKnown RBP12.66□□□□□ -0.38
ITGB1-202ENST00000396033 UNC45BQ8IWX7 931 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 FAM71DQ8N9W8 422 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 SLC12A6Q9UHW9 1150 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 SHOC2Q9UQ13 582 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.66□□□□□ -0.38
ITGB1-202ENST00000396033 APOL1O14791 398 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 BEST1O76090 585 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 FAM200BP0CF97 657 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 RDXP35241 583 aaKnown RBP12.66□□□□□ -0.38
ITGB1-202ENST00000396033 MAGEA4P43358 317 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 CTCFP49711 727 aaPredicted RBP12.66□□□□□ -0.38
ITGB1-202ENST00000396033 ANKRD20A8PQ5CZ79 823 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 RELL1Q8IUW5 271 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 CD99L2Q8TCZ2 262 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 NDRG1Q92597 394 aaKnown RBP12.66□□□□□ -0.38
ITGB1-202ENST00000396033 PAAF1Q9BRP4 392 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 C11orf84Q9BUA3 381 aaPredicted RBP12.66□□□□□ -0.38
ITGB1-202ENST00000396033 LRRC4Q9HBW1 653 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 CRTAC1Q9NQ79 661 aa12.66□□□□□ -0.38
ITGB1-202ENST00000396033 POMCP01189 267 aa12.65□□□□□ -0.38
ITGB1-202ENST00000396033 RPL9P32969 192 aaKnown RBP12.65□□□□□ -0.38
ITGB1-202ENST00000396033 AUHQ13825 339 aaKnown RBP12.65□□□□□ -0.38
ITGB1-202ENST00000396033 ERMARDQ5T6L9 678 aa12.65□□□□□ -0.38
ITGB1-202ENST00000396033 CLEC20AQ6ZU45 233 aa12.65□□□□□ -0.38
ITGB1-202ENST00000396033 PAQR9Q6ZVX9 377 aa12.65□□□□□ -0.38
ITGB1-202ENST00000396033 B4GALNT4Q76KP1 1039 aa12.65□□□□□ -0.38
ITGB1-202ENST00000396033 PCGF5Q86SE9 256 aa12.65□□□□□ -0.38
ITGB1-202ENST00000396033 TADA2BQ86TJ2 420 aa12.65□□□□□ -0.38
ITGB1-202ENST00000396033 SIX6OS1Q8N1H7 587 aa12.65□□□□□ -0.38
ITGB1-202ENST00000396033 TAB3Q8N5C8 712 aaPredicted RBP12.65□□□□□ -0.38
ITGB1-202ENST00000396033 BCAS4Q8TDM0 211 aa12.65□□□□□ -0.38
ITGB1-202ENST00000396033 MYCBPQ99417 103 aaPredicted RBP12.65□□□□□ -0.38
ITGB1-202ENST00000396033 ADAM2Q99965 735 aa12.65□□□□□ -0.38
ITGB1-202ENST00000396033 ZNF670Q9BS34 389 aa12.65□□□□□ -0.38
ITGB1-202ENST00000396033 ADAM33Q9BZ11 813 aa12.65□□□□□ -0.38
ITGB1-202ENST00000396033 INPP5FQ9Y2H2 1132 aa12.65□□□□□ -0.38
ITGB1-202ENST00000396033 H7C0C1 242 aa12.65□□□□□ -0.38
ITGB1-202ENST00000396033 CAPN15O75808 1086 aa12.65□□□□□ -0.38
ITGB1-202ENST00000396033 IL4RP24394 825 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms