RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 TMX4Q9H1E5 349 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P10-201ENST00000395823 ABHD16BQ9H3Z7 469 aa5.73□□□□□ -1.49
HMGB1P10-201ENST00000395823 MAP3K2Q9Y2U5 619 aa5.73□□□□□ -1.49
HMGB1P10-201ENST00000395823 FPGT-TNNI3KV9GXZ4 949 aa5.73□□□□□ -1.49
HMGB1P10-201ENST00000395823 GXYLT2A0PJZ3 443 aa5.72□□□□□ -1.49
HMGB1P10-201ENST00000395823 MYADML2A6NDP7 307 aa5.72□□□□□ -1.49
HMGB1P10-201ENST00000395823 KRT38O76015 456 aa5.72□□□□□ -1.49
HMGB1P10-201ENST00000395823 PDHA1P08559 390 aa5.72□□□□□ -1.49
HMGB1P10-201ENST00000395823 CNPP09543 421 aaKnown RBP5.72□□□□□ -1.49
HMGB1P10-201ENST00000395823 COMTP21964 271 aa5.72□□□□□ -1.49
HMGB1P10-201ENST00000395823 ZFP36P26651 326 aaKnown RBP5.72□□□□□ -1.49
HMGB1P10-201ENST00000395823 PRKAR1BP31321 381 aa5.72□□□□□ -1.49
HMGB1P10-201ENST00000395823 ELF1P32519 619 aa5.72□□□□□ -1.49
HMGB1P10-201ENST00000395823 ZEB1P37275 1124 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P10-201ENST00000395823 VAMP2P63027 116 aa5.72□□□□□ -1.49
HMGB1P10-201ENST00000395823 ADAM17P78536 824 aa5.72□□□□□ -1.49
HMGB1P10-201ENST00000395823 HHEXQ03014 270 aa5.72□□□□□ -1.49
HMGB1P10-201ENST00000395823 FPGSQ05932 587 aa5.72□□□□□ -1.49
HMGB1P10-201ENST00000395823 TRPC3Q13507 836 aa5.72□□□□□ -1.49
HMGB1P10-201ENST00000395823 NBPF8Q3BBV2 869 aa5.72□□□□□ -1.49
HMGB1P10-201ENST00000395823 PREPLQ4J6C6 727 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P10-201ENST00000395823 ICE2Q659A1 982 aa5.72□□□□□ -1.49
HMGB1P10-201ENST00000395823 SFRP4Q6FHJ7 346 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P10-201ENST00000395823 SYT13Q7L8C5 426 aa5.72□□□□□ -1.49
HMGB1P10-201ENST00000395823 C11orf44Q8N8P7 122 aa5.72□□□□□ -1.49
HMGB1P10-201ENST00000395823 FAM136AQ96C01 138 aa5.72□□□□□ -1.49
HMGB1P10-201ENST00000395823 AGXT2Q9BYV1 514 aa5.72□□□□□ -1.49
HMGB1P10-201ENST00000395823 AMBRA1Q9C0C7 1298 aa5.72□□□□□ -1.49
HMGB1P10-201ENST00000395823 UNKLQ9H9P5 680 aaKnown RBP5.72□□□□□ -1.49
HMGB1P10-201ENST00000395823 USP22Q9UPT9 525 aa5.72□□□□□ -1.49
HMGB1P10-201ENST00000395823 JAG2Q9Y219 1238 aa5.72□□□□□ -1.49
HMGB1P10-201ENST00000395823 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.72□□□□□ -1.49
HMGB1P10-201ENST00000395823 KRTAP23-1A1A580 65 aa5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 PPM1DO15297 605 aa5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 PRICKLE3O43900 615 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 NCR1O76036 304 aa5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 SCAF4O95104 1147 aaKnown RBP5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 HLA-DOAP06340 250 aa5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 IFIT1P09914 478 aaKnown RBP5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 ZSCAN22P10073 491 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 XBP1P17861 261 aa5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 YY1P25490 414 aa5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 CFPP27918 469 aa5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 EPHA3P29320 983 aa5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 SERPINA4P29622 427 aa5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 PBX1P40424 430 aa5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 CDK7P50613 346 aa5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 HNRNPMP52272 730 aaKnown RBP eCLIP5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 EIF5P55010 431 aaKnown RBP5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 TIRAPP58753 221 aa5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 RRP1BQ14684 758 aaKnown RBP5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 CLCA4Q14CN2 919 aa5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 ACOX1Q15067 660 aa5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 TMEM196Q5HYL7 178 aa5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 SLC9A4Q6AI14 798 aa5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 FAAH2Q6GMR7 532 aa5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 TRABD2AQ86V40 505 aa5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 LRRC56Q8IYG6 542 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 IZUMO1Q8IYV9 350 aa5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 TMEM57Q8N5G2 664 aa5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 OSCP1Q8WVF1 389 aa5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 WDR60Q8WVS4 1066 aa5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 GOLGA1Q92805 767 aa5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 RNF31Q96EP0 1072 aa5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 WDYHV1Q96HA8 205 aa5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 VN1R3Q9BXE9 311 aa5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 CHODLQ9H9P2 273 aa5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 BLOC1S4Q9NUP1 217 aa5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 PI4KBQ9UBF8 816 aa5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 DNAJC16Q9Y2G8 782 aa5.71□□□□□ -1.5
HMGB1P10-201ENST00000395823 SLC38A8A6NNN8 435 aa5.7□□□□□ -1.5
HMGB1P10-201ENST00000395823 STX16-NPEPL1H3BU86 382 aa5.7□□□□□ -1.5
HMGB1P10-201ENST00000395823 M0QZQ0 153 aa5.7□□□□□ -1.5
HMGB1P10-201ENST00000395823 STX16O14662 325 aa5.7□□□□□ -1.5
HMGB1P10-201ENST00000395823 TRIAP1O43715 76 aa5.7□□□□□ -1.5
HMGB1P10-201ENST00000395823 RNASEH2AO75792 299 aaKnown RBP5.7□□□□□ -1.5
HMGB1P10-201ENST00000395823 RECQL4O94761 1208 aa5.7□□□□□ -1.5
HMGB1P10-201ENST00000395823 BAIAP3O94812 1187 aa5.7□□□□□ -1.5
HMGB1P10-201ENST00000395823 VAV2P52735 878 aa5.7□□□□□ -1.5
HMGB1P10-201ENST00000395823 ATXN1P54253 815 aaKnown RBP5.7□□□□□ -1.5
HMGB1P10-201ENST00000395823 SF3A3Q12874 501 aaKnown RBP eCLIP5.7□□□□□ -1.5
HMGB1P10-201ENST00000395823 MAPK7Q13164 816 aa5.7□□□□□ -1.5
HMGB1P10-201ENST00000395823 TOB2Q14106 344 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P10-201ENST00000395823 PKN1Q16512 942 aa5.7□□□□□ -1.5
HMGB1P10-201ENST00000395823 SP5Q6BEB4 398 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P10-201ENST00000395823 FSTL5Q8N475 847 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P10-201ENST00000395823 SUPT20HQ8NEM7 779 aa5.7□□□□□ -1.5
HMGB1P10-201ENST00000395823 BOD1Q96IK1 185 aa5.7□□□□□ -1.5
HMGB1P10-201ENST00000395823 ADAM2Q99965 735 aa5.7□□□□□ -1.5
HMGB1P10-201ENST00000395823 TTPALQ9BTX7 342 aa5.7□□□□□ -1.5
HMGB1P10-201ENST00000395823 GPR63Q9BZJ6 419 aa5.7□□□□□ -1.5
HMGB1P10-201ENST00000395823 INO80BQ9C086 356 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P10-201ENST00000395823 BRD8Q9H0E9 1235 aa5.7□□□□□ -1.5
HMGB1P10-201ENST00000395823 XYLT2Q9H1B5 865 aa5.7□□□□□ -1.5
HMGB1P10-201ENST00000395823 NDUFAF4Q9P032 175 aa5.7□□□□□ -1.5
HMGB1P10-201ENST00000395823 DRG1Q9Y295 367 aaKnown RBP5.7□□□□□ -1.5
HMGB1P10-201ENST00000395823 LOC105369274A0A096LPK9 316 aa5.69□□□□□ -1.5
HMGB1P10-201ENST00000395823 LOC102723532A0A0G2JNH3 316 aa5.69□□□□□ -1.5
HMGB1P10-201ENST00000395823 OTOL1A6NHN0 477 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P10-201ENST00000395823 M0QYT0 321 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms