RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 SH3RF2Q8TEC5 729 aa14.08□□□□□ -0.16
HLA-DMA-202ENST00000395303 ZFRQ96KR1 1074 aaKnown RBP14.08□□□□□ -0.16
HLA-DMA-202ENST00000395303 ZSWIM1Q9BR11 485 aa14.08□□□□□ -0.16
HLA-DMA-202ENST00000395303 UBE2TQ9NPD8 197 aaPredicted RBP14.08□□□□□ -0.16
HLA-DMA-202ENST00000395303 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.08□□□□□ -0.16
HLA-DMA-202ENST00000395303 MRPS17Q9Y2R5 130 aaKnown RBP14.08□□□□□ -0.16
HLA-DMA-202ENST00000395303 PIAS3Q9Y6X2 628 aa14.08□□□□□ -0.16
HLA-DMA-202ENST00000395303 EP300Q09472 2414 aaPredicted RBP14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 LEFTY2O00292 366 aa14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 STK25O00506 426 aa14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 COCHO43405 550 aa14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 SETSIPP0DME0 302 aa14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 CD19P15391 556 aa14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 TARSP26639 723 aaKnown RBP14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 CTHP32929 405 aa14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 RPS9P46781 194 aaKnown RBP14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 PSEN1P49768 467 aa14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 MFAP3P55082 362 aa14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 SLC8A3P57103 927 aa14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 PDE4CQ08493 712 aa14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 RUNX3Q13761 415 aa14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 ANGPT1Q15389 498 aa14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 MEA1Q16626 185 aa14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 ITPRIPL2Q3MIP1 535 aa14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 PM20D1Q6GTS8 502 aa14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 CC2D1AQ6P1N0 951 aaPredicted RBP14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 KLHDC10Q6PID8 442 aa14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 RALGPS2Q86X27 583 aaPredicted RBP14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 DDX42Q86XP3 938 aaKnown RBP eCLIP14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 DTWD2Q8NBA8 298 aa14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 OSCP1Q8WVF1 389 aa14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 KCTD13Q8WZ19 329 aa14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 FAM3CQ92520 227 aa14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 SHC3Q92529 594 aa14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 NKD2Q969F2 451 aaPredicted RBP14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 CCSER2Q9H7U1 834 aa14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 NMUR1Q9HB89 426 aa14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 OSER1Q9NX31 292 aa14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 GTSE1Q9NYZ3 720 aa14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 HESX1Q9UBX0 185 aa14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 MTF2Q9Y483 593 aaPredicted RBP14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 CPQQ9Y646 472 aa14.07□□□□□ -0.16
HLA-DMA-202ENST00000395303 FAM170BA6NMN3 283 aa14.06□□□□□ -0.16
HLA-DMA-202ENST00000395303 BECN2A8MW95 431 aa14.06□□□□□ -0.16
HLA-DMA-202ENST00000395303 SPECC1L-ADORA2AF8WAN1 911 aa14.06□□□□□ -0.16
HLA-DMA-202ENST00000395303 TULP2O00295 520 aa14.06□□□□□ -0.16
HLA-DMA-202ENST00000395303 CYP26A1O43174 497 aa14.06□□□□□ -0.16
HLA-DMA-202ENST00000395303 TLR5O60602 858 aa14.06□□□□□ -0.16
HLA-DMA-202ENST00000395303 ABL1P00519 1130 aa14.06□□□□□ -0.16
HLA-DMA-202ENST00000395303 MBL2P11226 248 aaPredicted RBP14.06□□□□□ -0.16
HLA-DMA-202ENST00000395303 CD72P21854 359 aa14.06□□□□□ -0.16
HLA-DMA-202ENST00000395303 RFX1P22670 979 aa14.06□□□□□ -0.16
HLA-DMA-202ENST00000395303 TYRO3Q06418 890 aa14.06□□□□□ -0.16
HLA-DMA-202ENST00000395303 TNK2Q07912 1038 aa14.06□□□□□ -0.16
HLA-DMA-202ENST00000395303 KCNMA1Q12791 1236 aa14.06□□□□□ -0.16
HLA-DMA-202ENST00000395303 KLHL40Q2TBA0 621 aa14.06□□□□□ -0.16
HLA-DMA-202ENST00000395303 EML3Q32P44 896 aa14.06□□□□□ -0.16
HLA-DMA-202ENST00000395303 HSP90AA4PQ58FG1 418 aa14.06□□□□□ -0.16
HLA-DMA-202ENST00000395303 GJB7Q6PEY0 223 aa14.06□□□□□ -0.16
HLA-DMA-202ENST00000395303 SCD5Q86SK9 330 aa14.06□□□□□ -0.16
HLA-DMA-202ENST00000395303 SLC35F5Q8WV83 523 aa14.06□□□□□ -0.16
HLA-DMA-202ENST00000395303 CHFRQ96EP1 664 aa14.06□□□□□ -0.16
HLA-DMA-202ENST00000395303 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.06□□□□□ -0.16
HLA-DMA-202ENST00000395303 CLIC5Q9NZA1 410 aa14.06□□□□□ -0.16
HLA-DMA-202ENST00000395303 A0A1W2PQH9 124 aa14.05□□□□□ -0.16
HLA-DMA-202ENST00000395303 E2F8A0AVK6 867 aa14.05□□□□□ -0.16
HLA-DMA-202ENST00000395303 OTOL1A6NHN0 477 aaPredicted RBP14.05□□□□□ -0.16
HLA-DMA-202ENST00000395303 NCAM2O15394 837 aa14.05□□□□□ -0.16
HLA-DMA-202ENST00000395303 DCNP07585 359 aaKnown RBP14.05□□□□□ -0.16
HLA-DMA-202ENST00000395303 ARSAP15289 507 aa14.05□□□□□ -0.16
HLA-DMA-202ENST00000395303 BRD2P25440 801 aaKnown RBP14.05□□□□□ -0.16
HLA-DMA-202ENST00000395303 IFNAR2P48551 515 aa14.05□□□□□ -0.16
HLA-DMA-202ENST00000395303 RPL34P49207 117 aaKnown RBP14.05□□□□□ -0.16
HLA-DMA-202ENST00000395303 KPNA1P52294 538 aaPredicted RBP14.05□□□□□ -0.16
HLA-DMA-202ENST00000395303 MYL5Q02045 173 aa14.05□□□□□ -0.16
HLA-DMA-202ENST00000395303 APBA1Q02410 837 aa14.05□□□□□ -0.16
HLA-DMA-202ENST00000395303 UBXN2BQ14CS0 331 aa14.05□□□□□ -0.16
HLA-DMA-202ENST00000395303 NCAPHQ15003 741 aa14.05□□□□□ -0.16
HLA-DMA-202ENST00000395303 KRT31Q15323 416 aa14.05□□□□□ -0.16
HLA-DMA-202ENST00000395303 TRIM68Q6AZZ1 485 aa14.05□□□□□ -0.16
HLA-DMA-202ENST00000395303 BHLHA9Q7RTU4 235 aa14.05□□□□□ -0.16
HLA-DMA-202ENST00000395303 UBA3Q8TBC4 463 aa14.05□□□□□ -0.16
HLA-DMA-202ENST00000395303 FUCA2Q9BTY2 467 aa14.05□□□□□ -0.16
HLA-DMA-202ENST00000395303 KLF16Q9BXK1 252 aaPredicted RBP14.05□□□□□ -0.16
HLA-DMA-202ENST00000395303 HSD3B7Q9H2F3 369 aa14.05□□□□□ -0.16
HLA-DMA-202ENST00000395303 EBF3Q9H4W6 596 aa14.05□□□□□ -0.16
HLA-DMA-202ENST00000395303 FANCLQ9NW38 375 aa14.05□□□□□ -0.16
HLA-DMA-202ENST00000395303 DUS2Q9NX74 493 aaKnown RBP14.05□□□□□ -0.16
HLA-DMA-202ENST00000395303 LRRC10BA6NIK2 292 aa14.04□□□□□ -0.16
HLA-DMA-202ENST00000395303 GABBR2O75899 941 aa14.04□□□□□ -0.16
HLA-DMA-202ENST00000395303 CALCAP01258 141 aa14.04□□□□□ -0.16
HLA-DMA-202ENST00000395303 KRT5P13647 590 aa14.04□□□□□ -0.16
HLA-DMA-202ENST00000395303 ZNF18P17022 549 aa14.04□□□□□ -0.16
HLA-DMA-202ENST00000395303 PTMSP20962 102 aa14.04□□□□□ -0.16
HLA-DMA-202ENST00000395303 SOX9P48436 509 aa14.04□□□□□ -0.16
HLA-DMA-202ENST00000395303 TKTL1P51854 596 aa14.04□□□□□ -0.16
HLA-DMA-202ENST00000395303 CAVIN1Q6NZI2 390 aaKnown RBP14.04□□□□□ -0.16
HLA-DMA-202ENST00000395303 TXNDC11Q6PKC3 985 aa14.04□□□□□ -0.16
HLA-DMA-202ENST00000395303 MAMSTRQ6ZN01 415 aa14.04□□□□□ -0.16
HLA-DMA-202ENST00000395303 ARHGAP18Q8N392 663 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms