RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 ASH2LQ9UBL3 628 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 REV1Q9UBZ9 1251 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 SLC8A2Q9UPR5 921 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 ZBTB1Q9Y2K1 713 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 STXBP5LQ9Y2K9 1186 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 CDK13Q14004 1512 aaKnown RBP4.44□□□□□ -1.7
HERC4-204ENST00000395198 ARHGEF37A1IGU5 675 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 CCDC151A5D8V7 595 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 AHRRA9YTQ3 701 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 IGF2BP3O00425 579 aaKnown RBP eCLIP4.44□□□□□ -1.7
HERC4-204ENST00000395198 FTCDO95954 541 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 PRKCAP17252 672 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 EEF1GP26641 437 aaKnown RBP4.44□□□□□ -1.7
HERC4-204ENST00000395198 ATXN3P54252 364 aaPredicted RBP4.44□□□□□ -1.7
HERC4-204ENST00000395198 ATP8B2P98198 1209 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 TEFQ10587 303 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 MANEAQ5SRI9 462 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 THEMIS2Q5TEJ8 643 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 HGSNATQ68CP4 663 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 CYP2U1Q7Z449 544 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 BTLAQ7Z6A9 289 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 ST8SIA4Q92187 359 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 GORASP1Q9BQQ3 440 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 AIFM2Q9BRQ8 373 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 SPZ1Q9BXG8 430 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 EHD4Q9H223 541 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 TMEM60Q9H2L4 133 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 EVA1AQ9H8M9 152 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 EPB41L5Q9HCM4 733 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 OBP2BQ9NPH6 170 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 LRFN1Q9P244 771 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 PI4KBQ9UBF8 816 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 AFF4Q9UHB7 1163 aaKnown RBP4.44□□□□□ -1.7
HERC4-204ENST00000395198 PCDHB10Q9UN67 800 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 PLAGL2Q9UPG8 496 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 CBY1Q9Y3M2 126 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 EFCAB5A4FU69 1503 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 SYN3O14994 580 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 FFAR2O15552 330 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 FOXO3O43524 673 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 ATP5HO75947 161 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 CSH1P0DML2 217 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 CSH2P0DML3 217 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 TMIGD3P0DMS9 266 aaPredicted RBP4.44□□□□□ -1.7
HERC4-204ENST00000395198 TUBG1P23258 451 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 IL32P24001 234 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 LTKP29376 864 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 TKTP29401 623 aaKnown RBP4.44□□□□□ -1.7
HERC4-204ENST00000395198 STAT5AP42229 794 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 MAGEA4P43358 317 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 STARP49675 285 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 MLLT6P55198 1093 aaPredicted RBP4.44□□□□□ -1.7
HERC4-204ENST00000395198 MC1RQ01726 317 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 YWHAHQ04917 246 aaPredicted RBP4.44□□□□□ -1.7
HERC4-204ENST00000395198 ARHGAP19Q14CB8 494 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 PDK1Q15118 436 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 CCDC85BQ15834 202 aaPredicted RBP4.44□□□□□ -1.7
HERC4-204ENST00000395198 MPEG1Q2M385 716 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 SMTNL2Q2TAL5 461 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 MYLK3Q32MK0 819 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 PLA1AQ53H76 456 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 ZRANB3Q5FWF4 1079 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 LIN9Q5TKA1 542 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 FOXR2Q6PJQ5 311 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 NPNTQ6UXI9 565 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 MAML2Q8IZL2 1156 aaPredicted RBP4.44□□□□□ -1.7
HERC4-204ENST00000395198 CRYBG2Q8N1P7 616 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 SRBD1Q8N5C6 995 aaKnown RBP4.44□□□□□ -1.7
HERC4-204ENST00000395198 TTLQ8NG68 377 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.44□□□□□ -1.72e-10■■■■■ 28.1
HERC4-204ENST00000395198 SMARCE1Q969G3 411 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 SAAL1Q96ER3 474 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 PIWIL1Q96J94 861 aaKnown RBP4.44□□□□□ -1.7
HERC4-204ENST00000395198 PDLIM2Q96JY6 352 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 CARD14Q9BXL6 1004 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 GPR61Q9BZJ8 451 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 TSPAN10Q9H1Z9 355 aaPredicted RBP4.44□□□□□ -1.7
HERC4-204ENST00000395198 BRF2Q9HAW0 419 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 TUBG2Q9NRH3 451 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 SLC7A8Q9UHI5 535 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 FEM1BQ9UK73 627 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 ZNRF3Q9ULT6 936 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 AKT3Q9Y243 479 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 ASXL2Q76L83 1435 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 LRRIQ1Q96JM4 1722 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 KIF21BO75037 1637 aa4.44□□□□□ -1.7
HERC4-204ENST00000395198 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.43□□□□□ -1.7
HERC4-204ENST00000395198 A0A1W2PQU0 124 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 TTLL8A6PVC2 850 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 TBC1D4O60343 1298 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 EXOC3O60645 756 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 CSF1P09603 554 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 CPN2P22792 545 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 CTNNA2P26232 953 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 ADCK1Q86TW2 530 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 REXO1L1PQ8IX06 675 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 OR1N1Q8NGS0 311 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 BTN2A2Q8WVV5 523 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 OR1F2PQ96R84 312 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 TDRD1Q9BXT4 1180 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms