RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 TBX18O95935 607 aa32.38■■■□□ 2.77
CMTM4-202ENST00000394106 IRF1P10914 325 aa32.38■■■□□ 2.77
CMTM4-202ENST00000394106 GAS6Q14393 721 aa32.38■■■□□ 2.77
CMTM4-202ENST00000394106 TMEM196Q5HYL7 178 aa32.38■■■□□ 2.77
CMTM4-202ENST00000394106 FSTL4Q6MZW2 842 aa32.38■■■□□ 2.77
CMTM4-202ENST00000394106 CCDC186Q7Z3E2 898 aa32.38■■■□□ 2.77
CMTM4-202ENST00000394106 IRF2BP1Q8IU81 584 aa32.38■■■□□ 2.77
CMTM4-202ENST00000394106 GPT2Q8TD30 523 aa32.38■■■□□ 2.77
CMTM4-202ENST00000394106 P2RY13Q9BPV8 354 aa32.38■■■□□ 2.77
CMTM4-202ENST00000394106 UBXN6Q9BZV1 441 aa32.38■■■□□ 2.77
CMTM4-202ENST00000394106 PRMT8Q9NR22 394 aaPredicted RBP32.38■■■□□ 2.77
CMTM4-202ENST00000394106 KIAA1257Q9ULG3 409 aa32.38■■■□□ 2.77
CMTM4-202ENST00000394106 GFRA3O60609 400 aa32.37■■■□□ 2.77
CMTM4-202ENST00000394106 PAEPP09466 180 aa32.37■■■□□ 2.77
CMTM4-202ENST00000394106 RARGP13631 454 aa32.37■■■□□ 2.77
CMTM4-202ENST00000394106 MTIF2P46199 727 aaKnown RBP32.37■■■□□ 2.77
CMTM4-202ENST00000394106 GALK1P51570 392 aa32.37■■■□□ 2.77
CMTM4-202ENST00000394106 BCAT1P54687 386 aa32.37■■■□□ 2.77
CMTM4-202ENST00000394106 GCNT1Q02742 428 aa32.37■■■□□ 2.77
CMTM4-202ENST00000394106 PDE4CQ08493 712 aa32.37■■■□□ 2.77
CMTM4-202ENST00000394106 ZNF528Q3MIS6 628 aa32.37■■■□□ 2.77
CMTM4-202ENST00000394106 KIAA1958Q8N8K9 716 aa32.37■■■□□ 2.77
CMTM4-202ENST00000394106 UBA3Q8TBC4 463 aa32.37■■■□□ 2.77
CMTM4-202ENST00000394106 NKD2Q969F2 451 aaPredicted RBP32.37■■■□□ 2.77
CMTM4-202ENST00000394106 CRACR2AQ9BSW2 395 aa32.37■■■□□ 2.77
CMTM4-202ENST00000394106 CYLDQ9NQC7 956 aa32.37■■■□□ 2.77
CMTM4-202ENST00000394106 NUDT5Q9UKK9 219 aa32.37■■■□□ 2.77
CMTM4-202ENST00000394106 USP3Q9Y6I4 520 aa32.37■■■□□ 2.77
CMTM4-202ENST00000394106 E2F8A0AVK6 867 aa32.36■■■□□ 2.77
CMTM4-202ENST00000394106 RNF225M0QZC1 329 aaPredicted RBP32.36■■■□□ 2.77
CMTM4-202ENST00000394106 TULP2O00295 520 aa32.36■■■□□ 2.77
CMTM4-202ENST00000394106 ATP5C1P36542 298 aaKnown RBP32.36■■■□□ 2.77
CMTM4-202ENST00000394106 CCR3P51677 355 aa32.36■■■□□ 2.77
CMTM4-202ENST00000394106 BST2Q10589 180 aaKnown RBP32.36■■■□□ 2.77
CMTM4-202ENST00000394106 ZC3H14Q6PJT7 736 aaKnown RBP32.36■■■□□ 2.77
CMTM4-202ENST00000394106 SCD5Q86SK9 330 aa32.36■■■□□ 2.77
CMTM4-202ENST00000394106 SPEM1Q8N4L4 309 aa32.36■■■□□ 2.77
CMTM4-202ENST00000394106 RBBP8NLQ8NC74 664 aaPredicted RBP32.36■■■□□ 2.77
CMTM4-202ENST00000394106 TFAP2BQ92481 460 aa32.36■■■□□ 2.77
CMTM4-202ENST00000394106 EXOC4Q96A65 974 aa32.36■■■□□ 2.77
CMTM4-202ENST00000394106 FBRSL1Q9HCM7 1045 aaKnown RBP32.36■■■□□ 2.77
CMTM4-202ENST00000394106 O00370 1275 aa32.35■■■□□ 2.77
CMTM4-202ENST00000394106 EGFP01133 1207 aa32.35■■■□□ 2.77
CMTM4-202ENST00000394106 CYP17A1P05093 508 aa32.35■■■□□ 2.77
CMTM4-202ENST00000394106 ERCC5P28715 1186 aaPredicted RBP32.35■■■□□ 2.77
CMTM4-202ENST00000394106 SATB1Q01826 763 aa32.35■■■□□ 2.77
CMTM4-202ENST00000394106 C10orf120Q5SQS8 335 aa32.35■■■□□ 2.77
CMTM4-202ENST00000394106 ADGRG2Q8IZP9 1017 aa32.35■■■□□ 2.77
CMTM4-202ENST00000394106 SYNPOQ8N3V7 929 aa32.35■■■□□ 2.77
CMTM4-202ENST00000394106 CD101Q93033 1021 aa32.35■■■□□ 2.77
CMTM4-202ENST00000394106 KREMEN1Q96MU8 473 aa32.35■■■□□ 2.77
CMTM4-202ENST00000394106 THAP9Q9H5L6 903 aa32.35■■■□□ 2.77
CMTM4-202ENST00000394106 UBE2TQ9NPD8 197 aaPredicted RBP32.35■■■□□ 2.77
CMTM4-202ENST00000394106 MTPAPQ9NVV4 582 aaKnown RBP eCLIP32.35■■■□□ 2.77
CMTM4-202ENST00000394106 TBC1D14Q9P2M4 693 aa32.35■■■□□ 2.77
CMTM4-202ENST00000394106 XPO1O14980 1071 aaKnown RBP32.34■■■□□ 2.77
CMTM4-202ENST00000394106 MDM4O15151 490 aa32.34■■■□□ 2.77
CMTM4-202ENST00000394106 CALCAP01258 141 aa32.34■■■□□ 2.77
CMTM4-202ENST00000394106 CXCL12P48061 93 aa32.34■■■□□ 2.77
CMTM4-202ENST00000394106 PSEN1P49768 467 aa32.34■■■□□ 2.77
CMTM4-202ENST00000394106 TKTL1P51854 596 aa32.34■■■□□ 2.77
CMTM4-202ENST00000394106 PPP2R5DQ14738 602 aa32.34■■■□□ 2.77
CMTM4-202ENST00000394106 DHCR24Q15392 516 aa32.34■■■□□ 2.77
CMTM4-202ENST00000394106 RAB41Q5JT25 222 aa32.34■■■□□ 2.77
CMTM4-202ENST00000394106 MAMSTRQ6ZN01 415 aa32.34■■■□□ 2.77
CMTM4-202ENST00000394106 ASCL5Q7RTU5 278 aa32.34■■■□□ 2.77
CMTM4-202ENST00000394106 WBP2Q969T9 261 aa32.34■■■□□ 2.77
CMTM4-202ENST00000394106 RALAP11233 206 aa32.33■■■□□ 2.77
CMTM4-202ENST00000394106 BRD2P25440 801 aaKnown RBP32.33■■■□□ 2.77
CMTM4-202ENST00000394106 HSP90AA4PQ58FG1 418 aa32.33■■■□□ 2.77
CMTM4-202ENST00000394106 FAM114A1Q8IWE2 563 aa32.33■■■□□ 2.77
CMTM4-202ENST00000394106 KLF16Q9BXK1 252 aaPredicted RBP32.33■■■□□ 2.77
CMTM4-202ENST00000394106 LRRC4Q9HBW1 653 aa32.33■■■□□ 2.77
CMTM4-202ENST00000394106 PRR23AA6NEV1 266 aa32.32■■■□□ 2.76
CMTM4-202ENST00000394106 KRT5P13647 590 aa32.32■■■□□ 2.76
CMTM4-202ENST00000394106 DRD1P21728 446 aa32.32■■■□□ 2.76
CMTM4-202ENST00000394106 GOLGA8FQ08AF8 430 aa32.32■■■□□ 2.76
CMTM4-202ENST00000394106 GOLGA8DPQ0D2H9 430 aa32.32■■■□□ 2.76
CMTM4-202ENST00000394106 LCLAT1Q6UWP7 414 aa32.32■■■□□ 2.76
CMTM4-202ENST00000394106 GBP6Q6ZN66 633 aa32.32■■■□□ 2.76
CMTM4-202ENST00000394106 TADA2BQ86TJ2 420 aa32.32■■■□□ 2.76
CMTM4-202ENST00000394106 BBS7Q8IWZ6 715 aa32.32■■■□□ 2.76
CMTM4-202ENST00000394106 DNMT3LQ9UJW3 386 aa32.32■■■□□ 2.76
CMTM4-202ENST00000394106 PIEZO1Q92508 2521 aa32.32■■■□□ 2.76
CMTM4-202ENST00000394106 FANCMQ8IYD8 2048 aa32.31■■■□□ 2.76
CMTM4-202ENST00000394106 SETSIPP0DME0 302 aa32.31■■■□□ 2.76
CMTM4-202ENST00000394106 SLC9A1P19634 815 aa32.31■■■□□ 2.76
CMTM4-202ENST00000394106 TRIM65Q6PJ69 517 aa32.31■■■□□ 2.76
CMTM4-202ENST00000394106 ARHGAP18Q8N392 663 aa32.31■■■□□ 2.76
CMTM4-202ENST00000394106 ZSWIM1Q9BR11 485 aa32.31■■■□□ 2.76
CMTM4-202ENST00000394106 ULBP1Q9BZM6 244 aa32.31■■■□□ 2.76
CMTM4-202ENST00000394106 ZSCAN32Q9NX65 697 aa32.31■■■□□ 2.76
CMTM4-202ENST00000394106 CLIC5Q9NZA1 410 aa32.31■■■□□ 2.76
CMTM4-202ENST00000394106 M0QYV0 167 aa32.3■■■□□ 2.76
CMTM4-202ENST00000394106 ZBED1O96006 694 aa32.3■■■□□ 2.76
CMTM4-202ENST00000394106 ADH1CP00326 375 aa32.3■■■□□ 2.76
CMTM4-202ENST00000394106 PLA2G4AP47712 749 aa32.3■■■□□ 2.76
CMTM4-202ENST00000394106 ZNF132P52740 706 aa32.3■■■□□ 2.76
CMTM4-202ENST00000394106 ADIGQ0VDE8 80 aa32.3■■■□□ 2.76
CMTM4-202ENST00000394106 GJB7Q6PEY0 223 aa32.3■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms