RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 CHURC1Q8WUH1 139 aa11.89□□□□□ -0.51
PDCD4-202ENST00000393104 PEBP4Q96S96 227 aa11.89□□□□□ -0.51
PDCD4-202ENST00000393104 EPB41L1Q9H4G0 881 aa11.89□□□□□ -0.51
PDCD4-202ENST00000393104 IRAK4Q9NWZ3 460 aa11.89□□□□□ -0.51
PDCD4-202ENST00000393104 MAP3K20Q9NYL2 800 aaKnown RBP11.89□□□□□ -0.51
PDCD4-202ENST00000393104 HBS1LQ9Y450 684 aaKnown RBP11.89□□□□□ -0.51
PDCD4-202ENST00000393104 CCNT2O60583 730 aaKnown RBP11.89□□□□□ -0.51
PDCD4-202ENST00000393104 ENDOD1O94919 500 aa11.89□□□□□ -0.51
PDCD4-202ENST00000393104 KRT1P04264 644 aa11.89□□□□□ -0.51
PDCD4-202ENST00000393104 ASLP04424 464 aa11.89□□□□□ -0.51
PDCD4-202ENST00000393104 TROVE2P10155 538 aaKnown RBP eCLIP11.89□□□□□ -0.51
PDCD4-202ENST00000393104 MAGEA3P43357 314 aa11.89□□□□□ -0.51
PDCD4-202ENST00000393104 PTK7Q13308 1070 aa11.89□□□□□ -0.51
PDCD4-202ENST00000393104 FYB2Q5VWT5 728 aa11.89□□□□□ -0.51
PDCD4-202ENST00000393104 OR6Y1Q8NGX8 325 aa11.89□□□□□ -0.51
PDCD4-202ENST00000393104 TRPM4Q8TD43 1214 aa11.89□□□□□ -0.51
PDCD4-202ENST00000393104 SORT1Q99523 831 aa11.89□□□□□ -0.51
PDCD4-202ENST00000393104 POPDC2Q9HBU9 364 aa11.89□□□□□ -0.51
PDCD4-202ENST00000393104 CHMP2BQ9UQN3 213 aa11.89□□□□□ -0.51
PDCD4-202ENST00000393104 RFC1P35251 1148 aaPredicted RBP11.89□□□□□ -0.51
PDCD4-202ENST00000393104 SLC25A3Q00325 362 aa11.89□□□□□ -0.51
PDCD4-202ENST00000393104 SMTNL2Q2TAL5 461 aa11.89□□□□□ -0.51
PDCD4-202ENST00000393104 SH3D19Q5HYK7 790 aa11.89□□□□□ -0.51
PDCD4-202ENST00000393104 TMEM270Q6UE05 265 aa11.89□□□□□ -0.51
PDCD4-202ENST00000393104 NIPA1Q7RTP0 329 aa11.89□□□□□ -0.51
PDCD4-202ENST00000393104 GPD1LQ8N335 351 aa11.89□□□□□ -0.51
PDCD4-202ENST00000393104 ATP11CQ8NB49 1132 aa11.89□□□□□ -0.51
PDCD4-202ENST00000393104 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.89□□□□□ -0.51
PDCD4-202ENST00000393104 PYROXD1Q8WU10 500 aa11.89□□□□□ -0.51
PDCD4-202ENST00000393104 CCDC28BQ9BUN5 200 aa11.89□□□□□ -0.51
PDCD4-202ENST00000393104 PARVAQ9NVD7 372 aa11.89□□□□□ -0.51
PDCD4-202ENST00000393104 CSH1P0DML2 217 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 CSH2P0DML3 217 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 GNA15P30679 374 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 KDSRQ06136 332 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 ZYXQ15942 572 aaKnown RBP11.88□□□□□ -0.51
PDCD4-202ENST00000393104 BBS12Q6ZW61 710 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 PDCD7Q8N8D1 485 aaKnown RBP11.88□□□□□ -0.51
PDCD4-202ENST00000393104 KCNN1Q92952 543 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 TTC17Q96AE7 1141 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 TRIM11Q96F44 468 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 THTPAQ9BU02 230 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 SENP6Q9GZR1 1112 aaPredicted RBP11.88□□□□□ -0.51
PDCD4-202ENST00000393104 AS3MTQ9HBK9 375 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 MKS1Q9NXB0 559 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 PPP1R1BQ9UD71 204 aaPredicted RBP11.88□□□□□ -0.51
PDCD4-202ENST00000393104 IP6K2Q9UHH9 426 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 SH3BP1Q9Y3L3 701 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 LRRC37A2A6NM11 1700 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 POLR2AP24928 1970 aaKnown RBP11.88□□□□□ -0.51
PDCD4-202ENST00000393104 SGK1O00141 431 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 IL4RP24394 825 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 PRKCHP24723 683 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 GMPRP36959 345 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 HIRAP54198 1017 aaPredicted RBP11.88□□□□□ -0.51
PDCD4-202ENST00000393104 CDK18Q07002 472 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 PEX6Q13608 980 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 DPYSL3Q14195 570 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 TRMT5Q32P41 509 aaKnown RBP11.88□□□□□ -0.51
PDCD4-202ENST00000393104 FAM102BQ5T8I3 360 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 NPNTQ6UXI9 565 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 SAMD7Q7Z3H4 446 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 ALKBH8Q96BT7 664 aaKnown RBP11.88□□□□□ -0.51
PDCD4-202ENST00000393104 DNAJC1Q96KC8 554 aaKnown RBP11.88□□□□□ -0.51
PDCD4-202ENST00000393104 ZSCAN9O15535 394 aaPredicted RBP11.88□□□□□ -0.51
PDCD4-202ENST00000393104 STK10O94804 968 aaKnown RBP11.88□□□□□ -0.51
PDCD4-202ENST00000393104 FBXO21O94952 628 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 VCLP18206 1134 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 ACOT2P49753 483 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 BPIFB4P59827 614 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 TRMT1LQ7Z2T5 733 aaKnown RBP11.88□□□□□ -0.51
PDCD4-202ENST00000393104 KBTBD6Q86V97 674 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 TFB1MQ8WVM0 346 aaKnown RBP11.88□□□□□ -0.51
PDCD4-202ENST00000393104 TAGLN3Q9UI15 199 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 XPO7Q9UIA9 1087 aaKnown RBP11.88□□□□□ -0.51
PDCD4-202ENST00000393104 GJA3Q9Y6H8 435 aa11.88□□□□□ -0.51
PDCD4-202ENST00000393104 ATP9BO43861 1147 aa11.87□□□□□ -0.51
PDCD4-202ENST00000393104 SCNN1BP51168 640 aa11.87□□□□□ -0.51
PDCD4-202ENST00000393104 AQP5P55064 265 aa11.87□□□□□ -0.51
PDCD4-202ENST00000393104 YWHAZP63104 245 aaKnown RBP11.87□□□□□ -0.51
PDCD4-202ENST00000393104 CCDC6Q16204 474 aa11.87□□□□□ -0.51
PDCD4-202ENST00000393104 SUPT20HL1Q3ZLR7 823 aa11.87□□□□□ -0.51
PDCD4-202ENST00000393104 CYP4A22Q5TCH4 519 aa11.87□□□□□ -0.51
PDCD4-202ENST00000393104 TMC7Q7Z402 723 aa11.87□□□□□ -0.51
PDCD4-202ENST00000393104 DHDDSQ86SQ9 333 aa11.87□□□□□ -0.51
PDCD4-202ENST00000393104 FAM71DQ8N9W8 422 aa11.87□□□□□ -0.51
PDCD4-202ENST00000393104 STKLD1Q8NE28 680 aa11.87□□□□□ -0.51
PDCD4-202ENST00000393104 ZNF526Q8TF50 670 aaPredicted RBP11.87□□□□□ -0.51
PDCD4-202ENST00000393104 PPP2R3CQ969Q6 453 aa11.87□□□□□ -0.51
PDCD4-202ENST00000393104 TUBB6Q9BUF5 446 aa11.87□□□□□ -0.51
PDCD4-202ENST00000393104 COMMD3-BMI1R4GMX3 469 aa11.87□□□□□ -0.51
PDCD4-202ENST00000393104 SF3B1O75533 1304 aaKnown RBP eCLIP11.87□□□□□ -0.517e-6■■■■■ 28.7
PDCD4-202ENST00000393104 C19orf81C9J6K1 198 aa11.87□□□□□ -0.51
PDCD4-202ENST00000393104 GARTP22102 1010 aa11.87□□□□□ -0.51
PDCD4-202ENST00000393104 ADORA2AP29274 412 aa11.87□□□□□ -0.51
PDCD4-202ENST00000393104 SLC10A2Q12908 348 aaPredicted RBP11.87□□□□□ -0.51
PDCD4-202ENST00000393104 USP41Q3LFD5 358 aa11.87□□□□□ -0.51
PDCD4-202ENST00000393104 SH3PXD2AQ5TCZ1 1133 aa11.87□□□□□ -0.51
PDCD4-202ENST00000393104 MBLAC2Q68D91 279 aa11.87□□□□□ -0.51
PDCD4-202ENST00000393104 TRMT10BQ6PF06 316 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms