RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 NADKO95544 446 aaPredicted RBP7.89□□□□□ -1.15
VTI1A-201ENST00000393077 TFAP2AP05549 437 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 CYP2D6P10635 497 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 RARBP10826 455 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 DBTP11182 482 aaKnown RBP7.89□□□□□ -1.15
VTI1A-201ENST00000393077 ENO3P13929 434 aaPredicted RBP7.89□□□□□ -1.15
VTI1A-201ENST00000393077 NR2F2P24468 414 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 NKX2-5P52952 324 aaPredicted RBP7.89□□□□□ -1.15
VTI1A-201ENST00000393077 PDIA2Q13087 525 aaKnown RBP7.89□□□□□ -1.15
VTI1A-201ENST00000393077 PON2Q15165 354 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 ZYXQ15942 572 aaKnown RBP7.89□□□□□ -1.15
VTI1A-201ENST00000393077 TMC7Q7Z402 723 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 HACE1Q8IYU2 909 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 MTG1Q9BT17 334 aaPredicted RBP7.89□□□□□ -1.15
VTI1A-201ENST00000393077 WDR12Q9GZL7 423 aaKnown RBP7.89□□□□□ -1.15
VTI1A-201ENST00000393077 AVENQ9NQS1 362 aaPredicted RBP7.89□□□□□ -1.15
VTI1A-201ENST00000393077 C20orf96Q9NUD7 363 aaPredicted RBP7.89□□□□□ -1.15
VTI1A-201ENST00000393077 ZNF221Q9UK13 617 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 NFAT5O94916 1531 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 KRBA1A5PL33 1030 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 NFIBO00712 420 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 EPHB6O15197 1021 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 ZC3H11AO75152 810 aaKnown RBP eCLIP7.89□□□□□ -1.15
VTI1A-201ENST00000393077 CRTAMO95727 393 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 BGNP21810 368 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 EIF3EP60228 445 aaKnown RBP7.89□□□□□ -1.15
VTI1A-201ENST00000393077 RPL26P61254 145 aaKnown RBP7.89□□□□□ -1.15
VTI1A-201ENST00000393077 KCNH2Q12809 1159 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 MAPRE1Q15691 268 aaKnown RBP7.89□□□□□ -1.15
VTI1A-201ENST00000393077 ZBTB49Q6ZSB9 765 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 CLIP4Q8N3C7 705 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 ASCC1Q8N9N2 400 aaKnown RBP7.89□□□□□ -1.15
VTI1A-201ENST00000393077 ATL1Q8WXF7 558 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 C12orf43Q96C57 262 aaKnown RBP7.89□□□□□ -1.15
VTI1A-201ENST00000393077 CEP19Q96LK0 163 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 ZSCAN5AQ9BUG6 496 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 RHOBTB2Q9BYZ6 727 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 ABCB10Q9NRK6 738 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 ZNF277Q9NRM2 450 aaPredicted RBP7.89□□□□□ -1.15
VTI1A-201ENST00000393077 PI4KBQ9UBF8 816 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 PSMD13Q9UNM6 376 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 SLC8A2Q9UPR5 921 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 SNX13Q9Y5W8 968 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 ALG6Q9Y672 507 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 KNDC1Q76NI1 1749 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 MYOCOSA0A1B0GUC4 107 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 PP2D1A8MPX8 630 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 A8MU76 341 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 UBE2Q2LH0YL09 131 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 FOXN3O00409 490 aaPredicted RBP7.89□□□□□ -1.15
VTI1A-201ENST00000393077 AKAP10O43572 662 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 GPD2P43304 727 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 GJA9P57773 515 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 FAM209AQ5JX71 171 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 ZFP1Q6P2D0 407 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 PRUNE1Q86TP1 453 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 NT5DC3Q86UY8 548 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 BLIDQ8IZY5 108 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 TCP10LQ8TDR4 215 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 SEPT1Q8WYJ6 367 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 E2F7Q96AV8 911 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 FAR2Q96K12 515 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 PSKH2Q96QS6 385 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 PANX3Q96QZ0 392 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 NUDT12Q9BQG2 462 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 SLC13A1Q9BZW2 595 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 C6orf50Q9HD87 102 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 DIABLOQ9NR28 239 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 NINJ2Q9NZG7 142 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 POU2F3Q9UKI9 436 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 MKL2Q9ULH7 1088 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 WDR19Q8NEZ3 1342 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 FAM237BA0A1B0GVD1 139 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 LRRIQ4A6NIV6 560 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 CALUO43852 315 aaPredicted RBP7.88□□□□□ -1.15
VTI1A-201ENST00000393077 KRT37O76014 449 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 FUCA1P04066 466 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 RBP3P10745 1247 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 THRAP10827 490 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 ATF7P17544 494 aaPredicted RBP7.88□□□□□ -1.15
VTI1A-201ENST00000393077 ANXA13P27216 316 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 PCSK6P29122 969 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 HABP4Q5JVS0 413 aaKnown RBP7.88□□□□□ -1.15
VTI1A-201ENST00000393077 SPDYAQ5MJ70 313 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 C3orf62Q6ZUJ4 267 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 PSPC1Q8WXF1 523 aaKnown RBP7.88□□□□□ -1.15
VTI1A-201ENST00000393077 GPKOWQ92917 476 aaPredicted RBP eCLIP7.88□□□□□ -1.15
VTI1A-201ENST00000393077 KLHL32Q96NJ5 620 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 SENP7Q9BQF6 1050 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 KIFC3Q9BVG8 833 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 HIPK3Q9H422 1215 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 TMEM206Q9H813 350 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 PPCSQ9HAB8 311 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 GCNT4Q9P109 453 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 CRNNQ9UBG3 495 aaPredicted RBP7.88□□□□□ -1.15
VTI1A-201ENST00000393077 BCL9O00512 1426 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 FMN2Q9NZ56 1722 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 A0A1W2PPW3 197 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 GSG1L2A8MUP6 293 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 GOLGA8SH3BPF8 625 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms