RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 FUT8Q9BYC5 575 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 ZNF518BQ9C0D4 1074 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 FAM192AQ9GZU8 254 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 ABHD16BQ9H3Z7 469 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 SLC39A2Q9NP94 309 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 TRPC4Q9UBN4 977 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 PRSS50Q9UI38 385 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 NAALADL1Q9UQQ1 740 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 CDY2AQ9Y6F7 541 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 SETD1BQ9UPS6 1966 aaKnown RBP3.74□□□□□ -1.81
XRN1-202ENST00000392981 KIF1CO43896 1103 aaKnown RBP3.74□□□□□ -1.81
XRN1-202ENST00000392981 SYNCRIPO60506 623 aaKnown RBP3.74□□□□□ -1.81
XRN1-202ENST00000392981 NFICP08651 508 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 QDPRP09417 244 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 C6P13671 934 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 CCDC173Q0VFZ6 552 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 CCDC152Q4G0S7 254 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 TAF1BQ53T94 588 aaPredicted RBP3.74□□□□□ -1.81
XRN1-202ENST00000392981 ARL6IP4Q66PJ3 421 aaKnown RBP3.74□□□□□ -1.81
XRN1-202ENST00000392981 LINC00346Q8IVM7 164 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 MFN1Q8IWA4 741 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 KLHL23Q8NBE8 558 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 TTLL11Q8NHH1 800 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 TSPEARQ8WU66 669 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 ERLEC1Q96DZ1 483 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 BSCL2Q96G97 398 aaPredicted RBP3.74□□□□□ -1.81
XRN1-202ENST00000392981 CD180Q99467 661 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 VPS16Q9H269 839 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 CHST8Q9H2A9 424 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 CLSTN2Q9H4D0 955 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 NDUFAF4Q9P032 175 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 PTBP2Q9UKA9 531 aaKnown RBP3.74□□□□□ -1.81
XRN1-202ENST00000392981 FBXW2Q9UKT8 454 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 DAPP1Q9UN19 280 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 VPS4AQ9UN37 437 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 NCAPD3P42695 1498 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 C7orf72A4D263 438 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 H0Y858 1186 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 ZNF561-AS1K7EIQ3 104 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 PSMD14O00487 310 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 FMO6PO60774 539 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 SMPD2O60906 423 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 PAPLNO95428 1278 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 AMY2AP04746 511 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 CD19P15391 556 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 AMY2BP19961 511 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 AZGP1P25311 298 aaKnown RBP3.74□□□□□ -1.81
XRN1-202ENST00000392981 CXCR5P32302 372 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 LUMP51884 338 aaPredicted RBP3.74□□□□□ -1.81
XRN1-202ENST00000392981 ZNF135P52742 658 aaPredicted RBP3.74□□□□□ -1.81
XRN1-202ENST00000392981 ATXN3P54252 364 aaPredicted RBP3.74□□□□□ -1.81
XRN1-202ENST00000392981 KCNQ4P56696 695 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 CDC42EP1Q00587 391 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 PRKCEQ02156 737 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 BOP1Q14137 746 aaKnown RBP3.74□□□□□ -1.81
XRN1-202ENST00000392981 CSHL1Q14406 222 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 SLBPQ14493 270 aaKnown RBP eCLIP3.74□□□□□ -1.81
XRN1-202ENST00000392981 ZMYND11Q15326 602 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 KRTCAP3Q53RY4 240 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 TMTC4Q5T4D3 741 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 RAP1GAP2Q684P5 730 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 WDR73Q6P4I2 378 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 DCLRE1AQ6PJP8 1040 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 FAM83HQ6ZRV2 1179 aaPredicted RBP3.74□□□□□ -1.81
XRN1-202ENST00000392981 RRNAD1Q96FB5 475 aaKnown RBP3.74□□□□□ -1.81
XRN1-202ENST00000392981 IFT74Q96LB3 600 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 SH3GL2Q99962 352 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 LPIN3Q9BQK8 851 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 PDCD2LQ9BRP1 358 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 DPCDQ9BVM2 203 aaPredicted RBP3.74□□□□□ -1.81
XRN1-202ENST00000392981 PRDM12Q9H4Q4 367 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 TLR9Q9NR96 1032 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 MKLN1Q9UL63 735 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 HPSEQ9Y251 543 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 CCP110O43303 1012 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 EPN2O95208 641 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 MT-ATP6P00846 226 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 KRT1P04264 644 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 DNASE1P24855 282 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 NTSR1P30989 418 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 PBX3P40426 434 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 CLCN2P51788 898 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 HK2P52789 917 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 IFT88Q13099 833 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 CAMK1Q14012 370 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 SNX17Q15036 470 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 MBLAC2Q68D91 279 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 OTOAQ7RTW8 1153 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 FAM160B2Q86V87 743 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 IQCF2Q8IXL9 164 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 RSAD2Q8WXG1 361 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 TUBGCP3Q96CW5 907 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 PTCHD1Q96NR3 888 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 COLEC11Q9BWP8 271 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 WDCPQ9H6R7 721 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 LAMP5Q9UJQ1 280 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 GDAQ9Y2T3 454 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 STRAPQ9Y3F4 350 aaKnown RBP3.74□□□□□ -1.81
XRN1-202ENST00000392981 PCDHB4Q9Y5E5 795 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 LOC102723971A0A1B0GUV8 181 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms