RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 SMARCAL1Q9NZC9 954 aa19.83■□□□□ 0.76
CCDC50-202ENST00000392456 NOVA2Q9UNW9 492 aaKnown RBP19.83■□□□□ 0.76
CCDC50-202ENST00000392456 PTPN22Q9Y2R2 807 aa19.83■□□□□ 0.76
CCDC50-202ENST00000392456 HYOU1Q9Y4L1 999 aa19.83■□□□□ 0.76
CCDC50-202ENST00000392456 IGFBP6P24592 240 aaPredicted RBP19.82■□□□□ 0.76
CCDC50-202ENST00000392456 PTK7Q13308 1070 aa19.82■□□□□ 0.76
CCDC50-202ENST00000392456 LPIN1Q14693 890 aa19.82■□□□□ 0.76
CCDC50-202ENST00000392456 GATA6Q92908 595 aa19.82■□□□□ 0.76
CCDC50-202ENST00000392456 ABTB1Q969K4 478 aaPredicted RBP19.82■□□□□ 0.76
CCDC50-202ENST00000392456 CATSPER2Q96P56 530 aa19.82■□□□□ 0.76
CCDC50-202ENST00000392456 TWNKQ96RR1 684 aa19.82■□□□□ 0.76
CCDC50-202ENST00000392456 ELAC2Q9BQ52 826 aaKnown RBP19.82■□□□□ 0.76
CCDC50-202ENST00000392456 BEGAINQ9BUH8 593 aa19.82■□□□□ 0.76
CCDC50-202ENST00000392456 MIS12Q9H081 205 aa19.82■□□□□ 0.76
CCDC50-202ENST00000392456 CACNG4Q9UBN1 327 aa19.82■□□□□ 0.76
CCDC50-202ENST00000392456 ZNF148Q9UQR1 794 aa19.82■□□□□ 0.76
CCDC50-202ENST00000392456 ANKRD62A6NC57 917 aa19.82■□□□□ 0.76
CCDC50-202ENST00000392456 SIGLEC16A6NMB1 481 aa19.82■□□□□ 0.76
CCDC50-202ENST00000392456 BTNL10A8MVZ5 291 aa19.82■□□□□ 0.76
CCDC50-202ENST00000392456 ALDH2P05091 517 aa19.82■□□□□ 0.76
CCDC50-202ENST00000392456 TMEM253P0C7T8 217 aa19.82■□□□□ 0.76
CCDC50-202ENST00000392456 PTDSS1P48651 473 aaKnown RBP19.82■□□□□ 0.76
CCDC50-202ENST00000392456 LLGL2Q6P1M3 1020 aa19.82■□□□□ 0.76
CCDC50-202ENST00000392456 PHLDB2Q86SQ0 1253 aa19.82■□□□□ 0.76
CCDC50-202ENST00000392456 OR2W6PQ8NHA6 318 aa19.82■□□□□ 0.76
CCDC50-202ENST00000392456 TFAP2BQ92481 460 aa19.82■□□□□ 0.76
CCDC50-202ENST00000392456 TLR10Q9BXR5 811 aa19.82■□□□□ 0.76
CCDC50-202ENST00000392456 BCO2Q9BYV7 579 aa19.82■□□□□ 0.76
CCDC50-202ENST00000392456 ITGA11Q9UKX5 1188 aa19.82■□□□□ 0.76
CCDC50-202ENST00000392456 ESYT3A0FGR9 886 aa19.81■□□□□ 0.76
CCDC50-202ENST00000392456 ZSCAN5CA6NGD5 496 aaPredicted RBP19.81■□□□□ 0.76
CCDC50-202ENST00000392456 CXCR5P32302 372 aa19.81■□□□□ 0.76
CCDC50-202ENST00000392456 DNA2P51530 1060 aa19.81■□□□□ 0.76
CCDC50-202ENST00000392456 RBP5P82980 135 aa19.81■□□□□ 0.76
CCDC50-202ENST00000392456 SF3A3Q12874 501 aaKnown RBP eCLIP19.81■□□□□ 0.76
CCDC50-202ENST00000392456 PUS10Q3MIT2 529 aaKnown RBP19.81■□□□□ 0.76
CCDC50-202ENST00000392456 CFAP157Q5JU67 520 aa19.81■□□□□ 0.76
CCDC50-202ENST00000392456 TPCN2Q8NHX9 752 aa19.81■□□□□ 0.76
CCDC50-202ENST00000392456 ZNF606Q8WXB4 792 aa19.81■□□□□ 0.76
CCDC50-202ENST00000392456 DEFB118Q96PH6 123 aa19.81■□□□□ 0.76
CCDC50-202ENST00000392456 SRPK1Q96SB4 655 aaKnown RBP19.81■□□□□ 0.76
CCDC50-202ENST00000392456 TSEN34Q9BSV6 310 aaKnown RBP19.81■□□□□ 0.76
CCDC50-202ENST00000392456 EHD2Q9NZN4 543 aa19.81■□□□□ 0.76
CCDC50-202ENST00000392456 HESX1Q9UBX0 185 aa19.81■□□□□ 0.76
CCDC50-202ENST00000392456 THAP12O43422 761 aa19.81■□□□□ 0.76
CCDC50-202ENST00000392456 HEXIM1O94992 359 aaKnown RBP19.81■□□□□ 0.76
CCDC50-202ENST00000392456 GZMAP12544 262 aa19.81■□□□□ 0.76
CCDC50-202ENST00000392456 UNGP13051 313 aaPredicted RBP19.81■□□□□ 0.76
CCDC50-202ENST00000392456 HSD17B3P37058 310 aa19.81■□□□□ 0.76
CCDC50-202ENST00000392456 MTTPP55157 894 aa19.81■□□□□ 0.76
CCDC50-202ENST00000392456 RCN2Q14257 317 aa19.81■□□□□ 0.76
CCDC50-202ENST00000392456 MBTPS1Q14703 1052 aa19.81■□□□□ 0.76
CCDC50-202ENST00000392456 CLEC16AQ2KHT3 1053 aa19.81■□□□□ 0.76
CCDC50-202ENST00000392456 MUM1Q2TAK8 710 aa19.81■□□□□ 0.76
CCDC50-202ENST00000392456 LRRC34Q8IZ02 419 aa19.81■□□□□ 0.76
CCDC50-202ENST00000392456 LRRC57Q8N9N7 239 aa19.81■□□□□ 0.76
CCDC50-202ENST00000392456 SLC43A3Q8NBI5 491 aa19.81■□□□□ 0.76
CCDC50-202ENST00000392456 CASKIN2Q8WXE0 1202 aa19.81■□□□□ 0.76
CCDC50-202ENST00000392456 IRGQQ8WZA9 623 aa19.81■□□□□ 0.76
CCDC50-202ENST00000392456 ERVK-5Q9HDB9 667 aa19.81■□□□□ 0.76
CCDC50-202ENST00000392456 RBM12Q9NTZ6 932 aaKnown RBP19.81■□□□□ 0.76
CCDC50-202ENST00000392456 FAM105AQ9NUU6 356 aa19.81■□□□□ 0.76
CCDC50-202ENST00000392456 DCDC2CA8MYV0 355 aa19.8■□□□□ 0.76
CCDC50-202ENST00000392456 PTGESO14684 152 aa19.8■□□□□ 0.76
CCDC50-202ENST00000392456 CKBP12277 381 aa19.8■□□□□ 0.76
CCDC50-202ENST00000392456 NEK2P51955 445 aa19.8■□□□□ 0.76
CCDC50-202ENST00000392456 MAGOHP61326 146 aaKnown RBP19.8■□□□□ 0.76
CCDC50-202ENST00000392456 XKR4Q5GH76 650 aa19.8■□□□□ 0.76
CCDC50-202ENST00000392456 TRAF7Q6Q0C0 670 aa19.8■□□□□ 0.76
CCDC50-202ENST00000392456 GSTCDQ8NEC7 633 aa19.8■□□□□ 0.76
CCDC50-202ENST00000392456 TAF4BQ92750 862 aa19.8■□□□□ 0.76
CCDC50-202ENST00000392456 MAGOHBQ96A72 148 aaKnown RBP19.8■□□□□ 0.76
CCDC50-202ENST00000392456 WBP1LQ9NX94 342 aa19.8■□□□□ 0.76
CCDC50-202ENST00000392456 N6AMT1Q9Y5N5 214 aa19.8■□□□□ 0.76
CCDC50-202ENST00000392456 PAFAH1B1P43034 410 aa19.8■□□□□ 0.76
CCDC50-202ENST00000392456 UAP1Q16222 522 aaPredicted RBP19.8■□□□□ 0.76
CCDC50-202ENST00000392456 PACS1Q6VY07 963 aa19.8■□□□□ 0.76
CCDC50-202ENST00000392456 NT5DC4Q86YG4 428 aa19.8■□□□□ 0.76
CCDC50-202ENST00000392456 MDM1Q8TC05 714 aa19.8■□□□□ 0.76
CCDC50-202ENST00000392456 BHMTQ93088 406 aa19.8■□□□□ 0.76
CCDC50-202ENST00000392456 UTP4Q969X6 686 aaKnown RBP19.8■□□□□ 0.76
CCDC50-202ENST00000392456 VRTNQ9H8Y1 702 aa19.8■□□□□ 0.76
CCDC50-202ENST00000392456 PFDN4Q9NQP4 134 aa19.8■□□□□ 0.76
CCDC50-202ENST00000392456 LAMA2P24043 3122 aaKnown RBP19.79■□□□□ 0.76
CCDC50-202ENST00000392456 ATICP31939 592 aa19.79■□□□□ 0.76
CCDC50-202ENST00000392456 GEMIN4P57678 1058 aaKnown RBP19.79■□□□□ 0.76
CCDC50-202ENST00000392456 DHX9Q08211 1270 aaKnown RBP19.79■□□□□ 0.76
CCDC50-202ENST00000392456 ACAD10Q6JQN1 1059 aa19.79■□□□□ 0.76
CCDC50-202ENST00000392456 KLC3Q6P597 504 aa19.79■□□□□ 0.76
CCDC50-202ENST00000392456 RFFLQ8WZ73 363 aa19.79■□□□□ 0.76
CCDC50-202ENST00000392456 PAK6Q9NQU5 681 aaPredicted RBP19.79■□□□□ 0.76
CCDC50-202ENST00000392456 MIOSQ9NXC5 875 aa19.79■□□□□ 0.76
CCDC50-202ENST00000392456 ARHGEF38Q9NXL2 777 aa19.79■□□□□ 0.76
CCDC50-202ENST00000392456 KIAA1522Q9P206 1035 aaPredicted RBP19.79■□□□□ 0.76
CCDC50-202ENST00000392456 TRIM33Q9UPN9 1127 aa19.79■□□□□ 0.76
CCDC50-202ENST00000392456 GPR182O15218 404 aa19.79■□□□□ 0.76
CCDC50-202ENST00000392456 SPTLC1O15269 473 aa19.79■□□□□ 0.76
CCDC50-202ENST00000392456 BIRC5O15392 142 aa19.79■□□□□ 0.76
CCDC50-202ENST00000392456 SHBGP04278 402 aa19.79■□□□□ 0.76
CCDC50-202ENST00000392456 C9orf57Q5W0N0 161 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms