RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 TNNC2P02585 160 aa22.72■■□□□ 1.23
CNEP1R1-201ENST00000389134 GRIN1Q05586 938 aa22.72■■□□□ 1.23
CNEP1R1-201ENST00000389134 ALCAMQ13740 583 aa22.72■■□□□ 1.23
CNEP1R1-201ENST00000389134 PNPLA1Q8N8W4 532 aa22.72■■□□□ 1.23
CNEP1R1-201ENST00000389134 OVCA2Q8WZ82 227 aa22.72■■□□□ 1.23
CNEP1R1-201ENST00000389134 FOXJ1Q92949 421 aa22.72■■□□□ 1.23
CNEP1R1-201ENST00000389134 MMS19Q96T76 1030 aa22.72■■□□□ 1.23
CNEP1R1-201ENST00000389134 CBWD1Q9BRT8 395 aa22.72■■□□□ 1.23
CNEP1R1-201ENST00000389134 ZDHHC5Q9C0B5 715 aa22.72■■□□□ 1.23
CNEP1R1-201ENST00000389134 TBC1D7Q9P0N9 293 aa22.72■■□□□ 1.23
CNEP1R1-201ENST00000389134 CYP8B1Q9UNU6 501 aa22.72■■□□□ 1.23
CNEP1R1-201ENST00000389134 SH3BP1Q9Y3L3 701 aa22.72■■□□□ 1.23
CNEP1R1-201ENST00000389134 KIAA0391O15091 583 aaKnown RBP22.71■■□□□ 1.23
CNEP1R1-201ENST00000389134 NDUFS2O75306 463 aa22.71■■□□□ 1.23
CNEP1R1-201ENST00000389134 YWHAQP27348 245 aa22.71■■□□□ 1.23
CNEP1R1-201ENST00000389134 GNL1P36915 607 aaPredicted RBP22.71■■□□□ 1.23
CNEP1R1-201ENST00000389134 WASP42768 502 aa22.71■■□□□ 1.23
CNEP1R1-201ENST00000389134 SURF1Q15526 300 aa22.71■■□□□ 1.23
CNEP1R1-201ENST00000389134 DUOXA2Q1HG44 320 aa22.71■■□□□ 1.23
CNEP1R1-201ENST00000389134 ANO4Q32M45 955 aa22.71■■□□□ 1.23
CNEP1R1-201ENST00000389134 GLRX5Q86SX6 157 aa22.71■■□□□ 1.23
CNEP1R1-201ENST00000389134 ELOVL4Q9GZR5 314 aa22.71■■□□□ 1.23
CNEP1R1-201ENST00000389134 SNX25Q9H3E2 840 aa22.71■■□□□ 1.23
CNEP1R1-201ENST00000389134 PCIF1Q9H4Z3 704 aa22.71■■□□□ 1.23
CNEP1R1-201ENST00000389134 SPHK2Q9NRA0 654 aa22.71■■□□□ 1.23
CNEP1R1-201ENST00000389134 STK17AQ9UEE5 414 aa22.71■■□□□ 1.23
CNEP1R1-201ENST00000389134 HCN2Q9UL51 889 aa22.71■■□□□ 1.23
CNEP1R1-201ENST00000389134 COCHO43405 550 aa22.7■■□□□ 1.22
CNEP1R1-201ENST00000389134 RTN3O95197 1032 aaPredicted RBP22.7■■□□□ 1.22
CNEP1R1-201ENST00000389134 FAM163BP0C2L3 166 aa22.7■■□□□ 1.22
CNEP1R1-201ENST00000389134 NDUFV2P19404 249 aa22.7■■□□□ 1.22
CNEP1R1-201ENST00000389134 WDR45BQ5MNZ6 344 aa22.7■■□□□ 1.22
CNEP1R1-201ENST00000389134 HECTD3Q5T447 861 aa22.7■■□□□ 1.22
CNEP1R1-201ENST00000389134 TOGARAM2Q6ZUX3 1019 aa22.7■■□□□ 1.22
CNEP1R1-201ENST00000389134 MIB1Q86YT6 1006 aa22.7■■□□□ 1.22
CNEP1R1-201ENST00000389134 NUP93Q8N1F7 819 aa22.7■■□□□ 1.22
CNEP1R1-201ENST00000389134 GPD1LQ8N335 351 aa22.7■■□□□ 1.22
CNEP1R1-201ENST00000389134 OR5B17Q8NGF7 314 aa22.7■■□□□ 1.22
CNEP1R1-201ENST00000389134 IPO4Q8TEX9 1081 aaKnown RBP22.7■■□□□ 1.22
CNEP1R1-201ENST00000389134 FBXO32Q969P5 355 aa22.7■■□□□ 1.22
CNEP1R1-201ENST00000389134 DNAJC19Q96DA6 116 aa22.7■■□□□ 1.22
CNEP1R1-201ENST00000389134 ZFRQ96KR1 1074 aaKnown RBP22.7■■□□□ 1.22
CNEP1R1-201ENST00000389134 SCUBE2Q9NQ36 999 aa22.7■■□□□ 1.22
CNEP1R1-201ENST00000389134 OLFML3Q9NRN5 406 aa22.7■■□□□ 1.22
CNEP1R1-201ENST00000389134 IFRD2Q12894 506 aaPredicted RBP22.69■■□□□ 1.22
CNEP1R1-201ENST00000389134 EGFLAMQ63HQ2 1017 aa22.69■■□□□ 1.22
CNEP1R1-201ENST00000389134 TMEM25Q86YD3 366 aa22.69■■□□□ 1.22
CNEP1R1-201ENST00000389134 BBS7Q8IWZ6 715 aa22.69■■□□□ 1.22
CNEP1R1-201ENST00000389134 CHPFQ8IZ52 775 aa22.69■■□□□ 1.22
CNEP1R1-201ENST00000389134 HNRNPLLQ8WVV9 542 aaKnown RBP22.69■■□□□ 1.22
CNEP1R1-201ENST00000389134 CD248Q9HCU0 757 aa22.69■■□□□ 1.22
CNEP1R1-201ENST00000389134 KIAA1522Q9P206 1035 aaPredicted RBP22.69■■□□□ 1.22
CNEP1R1-201ENST00000389134 CCDC39Q9UFE4 941 aa22.69■■□□□ 1.22
CNEP1R1-201ENST00000389134 ZNF233A6NK53 670 aa22.68■■□□□ 1.22
CNEP1R1-201ENST00000389134 EIF4E1BA6NMX2 242 aaKnown RBP22.68■■□□□ 1.22
CNEP1R1-201ENST00000389134 TACC1O75410 805 aa22.68■■□□□ 1.22
CNEP1R1-201ENST00000389134 PTPN1P18031 435 aaKnown RBP22.68■■□□□ 1.22
CNEP1R1-201ENST00000389134 TUBP50607 506 aa22.68■■□□□ 1.22
CNEP1R1-201ENST00000389134 CASP5P51878 434 aa22.68■■□□□ 1.22
CNEP1R1-201ENST00000389134 CACNA2D1P54289 1103 aa22.68■■□□□ 1.22
CNEP1R1-201ENST00000389134 GRIK2Q13002 908 aa22.68■■□□□ 1.22
CNEP1R1-201ENST00000389134 SNX30Q5VWJ9 437 aa22.68■■□□□ 1.22
CNEP1R1-201ENST00000389134 GRAMD4Q6IC98 578 aa22.68■■□□□ 1.22
CNEP1R1-201ENST00000389134 SV2BQ7L1I2 683 aa22.68■■□□□ 1.22
CNEP1R1-201ENST00000389134 OR6B3Q8NGW1 331 aa22.68■■□□□ 1.22
CNEP1R1-201ENST00000389134 MDM1Q8TC05 714 aa22.68■■□□□ 1.22
CNEP1R1-201ENST00000389134 GABRG3Q99928 467 aa22.68■■□□□ 1.22
CNEP1R1-201ENST00000389134 MRPL45Q9BRJ2 306 aaKnown RBP22.68■■□□□ 1.22
CNEP1R1-201ENST00000389134 TMEM30AQ9NV96 361 aa22.68■■□□□ 1.22
CNEP1R1-201ENST00000389134 PTPRJQ12913 1337 aa22.67■■□□□ 1.22
CNEP1R1-201ENST00000389134 CBFA2T3O75081 653 aa22.67■■□□□ 1.22
CNEP1R1-201ENST00000389134 PRPF6O94906 941 aaKnown RBP22.67■■□□□ 1.22
CNEP1R1-201ENST00000389134 SLCO6A1Q86UG4 719 aa22.67■■□□□ 1.22
CNEP1R1-201ENST00000389134 SPRYD3Q8NCJ5 442 aa22.67■■□□□ 1.22
CNEP1R1-201ENST00000389134 EPSTI1Q96J88 318 aa22.67■■□□□ 1.22
CNEP1R1-201ENST00000389134 XPO6Q96QU8 1125 aaKnown RBP22.67■■□□□ 1.22
CNEP1R1-201ENST00000389134 ACOX2Q99424 681 aa22.67■■□□□ 1.22
CNEP1R1-201ENST00000389134 KIF2CQ99661 725 aa22.67■■□□□ 1.22
CNEP1R1-201ENST00000389134 ZNF518BQ9C0D4 1074 aa22.67■■□□□ 1.22
CNEP1R1-201ENST00000389134 DNAJC17Q9NVM6 304 aaKnown RBP22.67■■□□□ 1.22
CNEP1R1-201ENST00000389134 DKK4Q9UBT3 224 aa22.67■■□□□ 1.22
CNEP1R1-201ENST00000389134 CHORDC1Q9UHD1 332 aaPredicted RBP22.67■■□□□ 1.22
CNEP1R1-201ENST00000389134 PCOLCE2Q9UKZ9 415 aa22.67■■□□□ 1.22
CNEP1R1-201ENST00000389134 RAXQ9Y2V3 346 aa22.67■■□□□ 1.22
CNEP1R1-201ENST00000389134 NFE2L3Q9Y4A8 694 aa22.67■■□□□ 1.22
CNEP1R1-201ENST00000389134 NME7Q9Y5B8 376 aa22.67■■□□□ 1.22
CNEP1R1-201ENST00000389134 ASH1LQ9NR48 2969 aaKnown RBP22.67■■□□□ 1.22
CNEP1R1-201ENST00000389134 TRIM24O15164 1050 aa22.66■■□□□ 1.22
CNEP1R1-201ENST00000389134 GJB2P29033 226 aa22.66■■□□□ 1.22
CNEP1R1-201ENST00000389134 WDR49Q8IV35 697 aa22.66■■□□□ 1.22
CNEP1R1-201ENST00000389134 SCFD1Q8WVM8 642 aa22.66■■□□□ 1.22
CNEP1R1-201ENST00000389134 B3GNT5Q9BYG0 378 aa22.66■■□□□ 1.22
CNEP1R1-201ENST00000389134 A0A1B0GTW7 788 aa22.65■■□□□ 1.22
CNEP1R1-201ENST00000389134 GFRA2O00451 464 aa22.65■■□□□ 1.22
CNEP1R1-201ENST00000389134 IDEP14735 1019 aa22.65■■□□□ 1.22
CNEP1R1-201ENST00000389134 MAOBP27338 520 aa22.65■■□□□ 1.22
CNEP1R1-201ENST00000389134 SF3A1Q15459 793 aaKnown RBP22.65■■□□□ 1.22
CNEP1R1-201ENST00000389134 RRAGBQ5VZM2 374 aa22.65■■□□□ 1.22
CNEP1R1-201ENST00000389134 USP49Q70CQ1 688 aa22.65■■□□□ 1.22
CNEP1R1-201ENST00000389134 TMPRSS7Q7RTY8 843 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms