RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 ELAC1Q9H777 363 aaKnown RBP6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 NRDE2Q9H7Z3 1164 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 MLXIPQ9HAP2 919 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 PRDM8Q9NQV8 689 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 SRP68Q9UHB9 627 aaKnown RBP6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 RIMKLBQ9ULI2 386 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 COL15A1P39059 1388 aa6.21□□□□□ -1.41
RNU6-40P-201ENST00000384254 LOC100996750A0A140TA64 210 aa6.21□□□□□ -1.42
RNU6-40P-201ENST00000384254 ADM5C9JUS6 153 aa6.21□□□□□ -1.42
RNU6-40P-201ENST00000384254 KIAA0355O15063 1070 aa6.21□□□□□ -1.42
RNU6-40P-201ENST00000384254 NCAM2O15394 837 aa6.21□□□□□ -1.42
RNU6-40P-201ENST00000384254 PEX1O43933 1283 aa6.21□□□□□ -1.42
RNU6-40P-201ENST00000384254 ONECUT2O95948 504 aa6.21□□□□□ -1.42
RNU6-40P-201ENST00000384254 LMNAP02545 664 aaKnown RBP6.21□□□□□ -1.42
RNU6-40P-201ENST00000384254 TMEM225BP0DP42 221 aa6.21□□□□□ -1.42
RNU6-40P-201ENST00000384254 KLRK1P26718 216 aa6.21□□□□□ -1.42
RNU6-40P-201ENST00000384254 ZEB1P37275 1124 aaPredicted RBP6.21□□□□□ -1.42
RNU6-40P-201ENST00000384254 MAGEA10P43363 369 aaPredicted RBP6.21□□□□□ -1.42
RNU6-40P-201ENST00000384254 LY6KQ17RY6 165 aa6.21□□□□□ -1.42
RNU6-40P-201ENST00000384254 RNF207Q6ZRF8 634 aa6.21□□□□□ -1.42
RNU6-40P-201ENST00000384254 MOGAT3Q86VF5 341 aa6.21□□□□□ -1.42
RNU6-40P-201ENST00000384254 ARHGEF19Q8IW93 802 aa6.21□□□□□ -1.42
RNU6-40P-201ENST00000384254 OR6Y1Q8NGX8 325 aa6.21□□□□□ -1.42
RNU6-40P-201ENST00000384254 SUN3Q8TAQ9 357 aa6.21□□□□□ -1.42
RNU6-40P-201ENST00000384254 SPPL3Q8TCT6 385 aa6.21□□□□□ -1.42
RNU6-40P-201ENST00000384254 AFG1LQ8WV93 481 aa6.21□□□□□ -1.42
RNU6-40P-201ENST00000384254 CPT1BQ92523 772 aa6.21□□□□□ -1.42
RNU6-40P-201ENST00000384254 FUBP1Q96AE4 644 aaKnown RBP6.21□□□□□ -1.42
RNU6-40P-201ENST00000384254 R3HDM4Q96D70 268 aa6.21□□□□□ -1.42
RNU6-40P-201ENST00000384254 TTPALQ9BTX7 342 aa6.21□□□□□ -1.42
RNU6-40P-201ENST00000384254 KRTAP4-6Q9BYQ5 205 aa6.21□□□□□ -1.42
RNU6-40P-201ENST00000384254 LPAR3Q9UBY5 353 aa6.21□□□□□ -1.42
RNU6-40P-201ENST00000384254 REXO2Q9Y3B8 237 aaKnown RBP6.21□□□□□ -1.42
RNU6-40P-201ENST00000384254 TSC22D4Q9Y3Q8 395 aa6.21□□□□□ -1.42
RNU6-40P-201ENST00000384254 RRN3P2A6NIE6 340 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 AGPSO00116 658 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 YY2O15391 372 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 WDR47O94967 919 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 PRKCBP05771 671 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 DRD1P21728 446 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 NR4A1P22736 598 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 ADD2P35612 726 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 CLCN2P51788 898 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 DGKQP52824 942 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 PDE1AP54750 535 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 TPTEP56180 551 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 EIF4A1P60842 406 aaKnown RBP6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 SUMO2P61956 95 aaKnown RBP6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 ADAM17P78536 824 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 BLOC1S1P78537 153 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 SLC25A3Q00325 362 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 GRM4Q14833 912 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 BTBD16Q32M84 506 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 LY6G5CQ5SRR4 150 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 TREML2Q5T2D2 321 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 ABHD17BQ5VST6 288 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 VWA1Q6PCB0 445 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 KRT27Q7Z3Y8 459 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 GPR149Q86SP6 731 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 P3H2Q8IVL5 708 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 LNX2Q8N448 690 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 SUPT20HQ8NEM7 779 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 SCAMP5Q8TAC9 235 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 SOCS4Q8WXH5 440 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 GOLGA1Q92805 767 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 RSPRY1Q96DX4 576 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 WDR24Q96S15 920 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 KLC4Q9NSK0 619 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 KCTD5Q9NXV2 234 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 EHD3Q9NZN3 535 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 NDUFAF4Q9P032 175 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 ANKFY1Q9P2R3 1169 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 PGAP2Q9UHJ9 254 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 C19orf53Q9UNZ5 99 aaPredicted RBP6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 SH2B3Q9UQQ2 575 aa6.2□□□□□ -1.42
RNU6-40P-201ENST00000384254 PROM1O43490 865 aa6.19□□□□□ -1.42
RNU6-40P-201ENST00000384254 LPXNO60711 386 aa6.19□□□□□ -1.42
RNU6-40P-201ENST00000384254 PPP6R2O75170 966 aa6.19□□□□□ -1.42
RNU6-40P-201ENST00000384254 VNN1O95497 513 aa6.19□□□□□ -1.42
RNU6-40P-201ENST00000384254 FESP07332 822 aa6.19□□□□□ -1.42
RNU6-40P-201ENST00000384254 RHOP08100 348 aa6.19□□□□□ -1.42
RNU6-40P-201ENST00000384254 CHRM2P08172 466 aa6.19□□□□□ -1.42
RNU6-40P-201ENST00000384254 DLDP09622 509 aaKnown RBP6.19□□□□□ -1.42
RNU6-40P-201ENST00000384254 ZNF20P17024 532 aa6.19□□□□□ -1.42
RNU6-40P-201ENST00000384254 HNRNPMP52272 730 aaKnown RBP eCLIP6.19□□□□□ -1.42
RNU6-40P-201ENST00000384254 SP2Q02086 613 aa6.19□□□□□ -1.42
RNU6-40P-201ENST00000384254 TMEM196Q5HYL7 178 aa6.19□□□□□ -1.42
RNU6-40P-201ENST00000384254 PLAC9Q5JTB6 97 aa6.19□□□□□ -1.42
RNU6-40P-201ENST00000384254 ZNF569Q5MCW4 686 aa6.19□□□□□ -1.42
RNU6-40P-201ENST00000384254 JAKMIP3Q5VZ66 844 aa6.19□□□□□ -1.42
RNU6-40P-201ENST00000384254 DENND2CQ68D51 928 aa6.19□□□□□ -1.42
RNU6-40P-201ENST00000384254 MAVSQ7Z434 540 aa6.19□□□□□ -1.42
RNU6-40P-201ENST00000384254 SUGP1Q8IWZ8 645 aaKnown RBP6.19□□□□□ -1.42
RNU6-40P-201ENST00000384254 LRRC71Q8N4P6 559 aa6.19□□□□□ -1.42
RNU6-40P-201ENST00000384254 PROKR1Q8TCW9 393 aa6.19□□□□□ -1.42
RNU6-40P-201ENST00000384254 LENG9Q96B70 501 aa6.19□□□□□ -1.42
RNU6-40P-201ENST00000384254 HAPLN3Q96S86 360 aa6.19□□□□□ -1.42
RNU6-40P-201ENST00000384254 AIFM2Q9BRQ8 373 aa6.19□□□□□ -1.42
RNU6-40P-201ENST00000384254 DDX23Q9BUQ8 820 aaKnown RBP6.19□□□□□ -1.42
RNU6-40P-201ENST00000384254 SERHL2Q9H4I8 314 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms