RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 FBXO21O94952 628 aa13.3□□□□□ -0.28
SMN1-202ENST00000380707 ABL1P00519 1130 aa13.3□□□□□ -0.28
SMN1-202ENST00000380707 GZMAP12544 262 aa13.3□□□□□ -0.28
SMN1-202ENST00000380707 FECHP22830 423 aa13.3□□□□□ -0.28
SMN1-202ENST00000380707 MRPS5P82675 430 aaKnown RBP13.3□□□□□ -0.28
SMN1-202ENST00000380707 GFPT1Q06210 699 aaPredicted RBP13.3□□□□□ -0.28
SMN1-202ENST00000380707 PTP4A2Q12974 167 aa13.3□□□□□ -0.28
SMN1-202ENST00000380707 TEAD2Q15562 447 aa13.3□□□□□ -0.28
SMN1-202ENST00000380707 SMAD2Q15796 467 aaKnown RBP13.3□□□□□ -0.28
SMN1-202ENST00000380707 SNX30Q5VWJ9 437 aa13.3□□□□□ -0.28
SMN1-202ENST00000380707 TXNDC8Q6A555 127 aa13.3□□□□□ -0.28
SMN1-202ENST00000380707 FAM183BPQ6ZVS7 135 aa13.3□□□□□ -0.28
SMN1-202ENST00000380707 GET4Q7L5D6 327 aaPredicted RBP13.3□□□□□ -0.28
SMN1-202ENST00000380707 MON1AQ86VX9 555 aa13.3□□□□□ -0.28
SMN1-202ENST00000380707 PHF13Q86YI8 300 aaPredicted RBP13.3□□□□□ -0.28
SMN1-202ENST00000380707 SCML4Q8N228 414 aa13.3□□□□□ -0.28
SMN1-202ENST00000380707 PDZD8Q8NEN9 1154 aa13.3□□□□□ -0.28
SMN1-202ENST00000380707 C18orf8Q96DM3 657 aa13.3□□□□□ -0.28
SMN1-202ENST00000380707 PIWIL1Q96J94 861 aaKnown RBP13.3□□□□□ -0.28
SMN1-202ENST00000380707 CCDC42Q96M95 316 aa13.3□□□□□ -0.28
SMN1-202ENST00000380707 C11orf70Q9BRQ4 267 aa13.3□□□□□ -0.28
SMN1-202ENST00000380707 THEGQ9P2T0 379 aa13.3□□□□□ -0.28
SMN1-202ENST00000380707 NAGPAQ9UK23 515 aa13.3□□□□□ -0.28
SMN1-202ENST00000380707 NCANO14594 1321 aa13.3□□□□□ -0.28
SMN1-202ENST00000380707 C2orf78A6NCI8 922 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 GOLGA6L6A8MZA4 724 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 FTLP02792 175 aaPredicted RBP13.29□□□□□ -0.28
SMN1-202ENST00000380707 PPP3CCP48454 512 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 KCNQ1P51787 676 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 SNX16P57768 344 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 TAF5Q15542 800 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 SLC18A3Q16572 532 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 OR6B2Q6IFH4 312 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 OLFML1Q6UWY5 402 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 HFE2Q6ZVN8 426 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 MON1BQ7L1V2 547 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 PHLDB2Q86SQ0 1253 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 XYLT1Q86Y38 959 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 TMEM139Q8IV31 216 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 NPAS3Q8IXF0 933 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 IPO4Q8TEX9 1081 aaKnown RBP13.29□□□□□ -0.28
SMN1-202ENST00000380707 ANP32BQ92688 251 aaKnown RBP13.29□□□□□ -0.28
SMN1-202ENST00000380707 FGF13Q92913 245 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 ZSWIM3Q96MP5 696 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 GCNAQ96QF7 691 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 ISCUQ9H1K1 167 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 DEF6Q9H4E7 631 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 TLR8Q9NR97 1041 aaKnown RBP13.29□□□□□ -0.28
SMN1-202ENST00000380707 ADAM22Q9P0K1 906 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 NENFQ9UMX5 172 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 AKR1B10O60218 316 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 RTN2O75298 545 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 SP100P23497 879 aaPredicted RBP13.29□□□□□ -0.28
SMN1-202ENST00000380707 GSDMDP57764 484 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 YWHAGP61981 247 aaKnown RBP eCLIP13.29□□□□□ -0.28
SMN1-202ENST00000380707 SLC6A3Q01959 620 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 PUS10Q3MIT2 529 aaKnown RBP13.29□□□□□ -0.28
SMN1-202ENST00000380707 GPR158Q5T848 1215 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 BSPRYQ5W0U4 402 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 ALKBH5Q6P6C2 394 aaKnown RBP13.29□□□□□ -0.28
SMN1-202ENST00000380707 MCOLN2Q8IZK6 566 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 MAB21L3Q8N8X9 362 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 MSANTD4Q8NCY6 345 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 IRGQQ8WZA9 623 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 MRPS31Q92665 395 aaKnown RBP13.29□□□□□ -0.28
SMN1-202ENST00000380707 KHSRPQ92945 711 aaKnown RBP eCLIP13.29□□□□□ -0.28
SMN1-202ENST00000380707 MCRS1Q96EZ8 462 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 PDLIM2Q96JY6 352 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 SLC22A12Q96S37 553 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 MYADMQ96S97 322 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 CYP2S1Q96SQ9 504 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 BAG1Q99933 345 aaPredicted RBP13.29□□□□□ -0.28
SMN1-202ENST00000380707 SLC46A2Q9BY10 475 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 CCSER2Q9H7U1 834 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 TRPC7Q9HCX4 862 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 SPTLC3Q9NUV7 552 aa13.29□□□□□ -0.28
SMN1-202ENST00000380707 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.29□□□□□ -0.28
SMN1-202ENST00000380707 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.29□□□□□ -0.28
SMN1-202ENST00000380707 MYO16Q9Y6X6 1858 aa13.28□□□□□ -0.28
SMN1-202ENST00000380707 SOWAHDA6NJG2 315 aa13.28□□□□□ -0.28
SMN1-202ENST00000380707 GRAP2O75791 330 aa13.28□□□□□ -0.28
SMN1-202ENST00000380707 TBX18O95935 607 aa13.28□□□□□ -0.28
SMN1-202ENST00000380707 OAS1P00973 400 aaKnown RBP13.28□□□□□ -0.28
SMN1-202ENST00000380707 LTFP02788 710 aa13.28□□□□□ -0.28
SMN1-202ENST00000380707 CALB1P05937 261 aa13.28□□□□□ -0.28
SMN1-202ENST00000380707 FYNP06241 537 aa13.28□□□□□ -0.28
SMN1-202ENST00000380707 RARGP13631 454 aa13.28□□□□□ -0.28
SMN1-202ENST00000380707 IL9P15248 144 aa13.28□□□□□ -0.28
SMN1-202ENST00000380707 PSEN1P49768 467 aa13.28□□□□□ -0.28
SMN1-202ENST00000380707 ZNF268Q14587 947 aaPredicted RBP13.28□□□□□ -0.28
SMN1-202ENST00000380707 ARHGAP15Q53QZ3 475 aa13.28□□□□□ -0.28
SMN1-202ENST00000380707 CCDC122Q5T0U0 273 aa13.28□□□□□ -0.28
SMN1-202ENST00000380707 ZDHHC17Q8IUH5 632 aa13.28□□□□□ -0.28
SMN1-202ENST00000380707 TMTC1Q8IUR5 882 aa13.28□□□□□ -0.28
SMN1-202ENST00000380707 ARHGAP18Q8N392 663 aa13.28□□□□□ -0.28
SMN1-202ENST00000380707 EDEM1Q92611 657 aa13.28□□□□□ -0.28
SMN1-202ENST00000380707 RNF38Q9H0F5 515 aa13.28□□□□□ -0.28
SMN1-202ENST00000380707 SLITRK6Q9H5Y7 841 aa13.28□□□□□ -0.28
SMN1-202ENST00000380707 CLIC5Q9NZA1 410 aa13.28□□□□□ -0.28
SMN1-202ENST00000380707 GDE1Q9NZC3 331 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms