RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 A0A1B0GTW7 788 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 FAM187AA6NFU0 413 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 hCG_2039718K7EN88 272 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 M0QX08 132 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 CASQ2O14958 399 aaPredicted RBP9.71□□□□□ -0.85
PTPRA-204ENST00000380393 POLR1CO15160 346 aaPredicted RBP9.71□□□□□ -0.85
PTPRA-204ENST00000380393 POLR2MP0CAP2 368 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 GRK2P25098 689 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 GNA12Q03113 381 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 NDUFAF5Q5TEU4 345 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 FAM205BPQ63HN1 556 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 LDHAL6AQ6ZMR3 332 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 FAM9CQ8IZT9 166 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 MAGEB6Q8N7X4 407 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 ISOC1Q96CN7 298 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 CDK5RAP1Q96SZ6 601 aaKnown RBP9.71□□□□□ -0.85
PTPRA-204ENST00000380393 CLPBQ9H078 707 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 ARHGEF35A5YM69 484 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 ERVV-1B6SEH8 477 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 GIPC1O14908 333 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 HDAC3O15379 428 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 PCCAP05165 728 aaPredicted RBP9.71□□□□□ -0.85
PTPRA-204ENST00000380393 MAGEA4P43358 317 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 CALCOCO2Q13137 446 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 AGAP7PQ5VUJ5 663 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 SCARA3Q6AZY7 606 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 IDO2Q6ZQW0 420 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 GPR180Q86V85 440 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 RBM15BQ8NDT2 890 aaKnown RBP9.71□□□□□ -0.85
PTPRA-204ENST00000380393 FLCNQ8NFG4 579 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 FBXO27Q8NI29 283 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 CDKL2Q92772 493 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 CDC42EP4Q9H3Q1 356 aaKnown RBP9.71□□□□□ -0.85
PTPRA-204ENST00000380393 DNAJC18Q9H819 358 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 ARMCX1Q9P291 453 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 PARP2Q9UGN5 583 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 PADI4Q9UM07 663 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 CPQQ9Y646 472 aa9.71□□□□□ -0.85
PTPRA-204ENST00000380393 CNTNAP4Q9C0A0 1308 aa9.71□□□□□ -0.86
PTPRA-204ENST00000380393 ANKRD62A6NC57 917 aa9.71□□□□□ -0.86
PTPRA-204ENST00000380393 FAM172BPA6NC97 362 aa9.71□□□□□ -0.86
PTPRA-204ENST00000380393 FADS2P1A8MWK0 482 aa9.71□□□□□ -0.86
PTPRA-204ENST00000380393 NKRFO15226 690 aaKnown RBP eCLIP9.71□□□□□ -0.86
PTPRA-204ENST00000380393 DBTP11182 482 aaKnown RBP9.71□□□□□ -0.86
PTPRA-204ENST00000380393 ALAS1P13196 640 aa9.71□□□□□ -0.86
PTPRA-204ENST00000380393 PRDX6P30041 224 aa9.71□□□□□ -0.86
PTPRA-204ENST00000380393 RPL21P46778 160 aaKnown RBP9.71□□□□□ -0.86
PTPRA-204ENST00000380393 PTENP60484 403 aa9.71□□□□□ -0.86
PTPRA-204ENST00000380393 FCHO2Q0JRZ9 810 aa9.71□□□□□ -0.86
PTPRA-204ENST00000380393 ZYXQ15942 572 aaKnown RBP9.71□□□□□ -0.86
PTPRA-204ENST00000380393 PGS1Q32NB8 556 aa9.71□□□□□ -0.86
PTPRA-204ENST00000380393 C6orf132Q5T0Z8 1188 aa9.71□□□□□ -0.86
PTPRA-204ENST00000380393 ZNF618Q5T7W0 954 aa9.71□□□□□ -0.86
PTPRA-204ENST00000380393 IFNL3Q8IZI9 196 aa9.71□□□□□ -0.86
PTPRA-204ENST00000380393 ZNF398Q8TD17 642 aa9.71□□□□□ -0.86
PTPRA-204ENST00000380393 TRUB1Q8WWH5 349 aaKnown RBP9.71□□□□□ -0.86
PTPRA-204ENST00000380393 CFAP57Q96MR6 1250 aa9.71□□□□□ -0.86
PTPRA-204ENST00000380393 SLC29A1Q99808 456 aa9.71□□□□□ -0.86
PTPRA-204ENST00000380393 INO80BQ9C086 356 aaPredicted RBP9.71□□□□□ -0.86
PTPRA-204ENST00000380393 GDAP2Q9NXN4 497 aa9.71□□□□□ -0.86
PTPRA-204ENST00000380393 ANKFY1Q9P2R3 1169 aa9.71□□□□□ -0.86
PTPRA-204ENST00000380393 NARFQ9UHQ1 456 aa9.71□□□□□ -0.86
PTPRA-204ENST00000380393 C1orf232A0A0U1RR37 186 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 ATP6V1G2-DDX39BF2Z307 99 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 NTSR2O95665 410 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 ENO1P06733 434 aaKnown RBP9.7□□□□□ -0.86
PTPRA-204ENST00000380393 INHBBP09529 407 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 RAG1P15918 1043 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 MUTP22033 750 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 ADD2P35612 726 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 ATP6V0D1P61421 351 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 NFIXQ14938 502 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 TRIP13Q15645 432 aaPredicted RBP9.7□□□□□ -0.86
PTPRA-204ENST00000380393 CARTPTQ16568 116 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 USP41Q3LFD5 358 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 METTL2BQ6P1Q9 378 aaKnown RBP9.7□□□□□ -0.86
PTPRA-204ENST00000380393 TTC7BQ86TV6 843 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 METTL3Q86U44 580 aaKnown RBP9.7□□□□□ -0.86
PTPRA-204ENST00000380393 GATAD2AQ86YP4 633 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 CDC26Q8NHZ8 85 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 SLC22A8Q8TCC7 542 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 RASGRP4Q8TDF6 673 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 GRHL1Q9NZI5 618 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 BAZ2BQ9UIF8 2168 aaKnown RBP9.7□□□□□ -0.86
PTPRA-204ENST00000380393 NHSQ6T4R5 1651 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 RBAK-RBAKDNI3L0D1 243 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 RNASEH2AO75792 299 aaKnown RBP9.7□□□□□ -0.86
PTPRA-204ENST00000380393 EPN2O95208 641 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 ALOX5P09917 674 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 ATF4P18848 351 aaPredicted RBP9.7□□□□□ -0.86
PTPRA-204ENST00000380393 COPZ1P61923 177 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 ESRRGP62508 458 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 MTMR2Q13614 643 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 SLC15A2Q16348 729 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 PDK4Q16654 411 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 EFHC1Q5JVL4 640 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 MIIPQ5JXC2 388 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 ATAD3BQ5T9A4 648 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 ANKRD53Q8N9V6 530 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 HEMGNQ9BXL5 484 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms