RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 CD48P09326 243 aa22.49■■□□□ 1.19
TRIM54-202ENST00000380075 CYP2C9P11712 490 aa22.49■■□□□ 1.19
TRIM54-202ENST00000380075 ITIH4Q14624 930 aa22.49■■□□□ 1.19
TRIM54-202ENST00000380075 PPP1R26Q5T8A7 1209 aaPredicted RBP22.49■■□□□ 1.19
TRIM54-202ENST00000380075 OLFML1Q6UWY5 402 aa22.49■■□□□ 1.19
TRIM54-202ENST00000380075 PPP1R21Q6ZMI0 780 aa22.49■■□□□ 1.19
TRIM54-202ENST00000380075 ARHGEF18Q6ZSZ5 1173 aa22.49■■□□□ 1.19
TRIM54-202ENST00000380075 PIGWQ7Z7B1 504 aa22.49■■□□□ 1.19
TRIM54-202ENST00000380075 TRIM6Q9C030 488 aaPredicted RBP22.49■■□□□ 1.19
TRIM54-202ENST00000380075 SENP1Q9P0U3 644 aa22.49■■□□□ 1.19
TRIM54-202ENST00000380075 GOLGA6L7A0A1B0GV03 622 aa22.48■■□□□ 1.19
TRIM54-202ENST00000380075 TSHRP16473 764 aa22.48■■□□□ 1.19
TRIM54-202ENST00000380075 SCNN1AP37088 669 aa22.48■■□□□ 1.19
TRIM54-202ENST00000380075 CDH6P55285 790 aa22.48■■□□□ 1.19
TRIM54-202ENST00000380075 SLC6A3Q01959 620 aa22.48■■□□□ 1.19
TRIM54-202ENST00000380075 NOMO1Q15155 1222 aa22.48■■□□□ 1.19
TRIM54-202ENST00000380075 RNF187Q5TA31 235 aaPredicted RBP22.48■■□□□ 1.19
TRIM54-202ENST00000380075 CCDC13Q8IYE1 715 aa22.48■■□□□ 1.19
TRIM54-202ENST00000380075 NAT8LQ8N9F0 302 aa22.48■■□□□ 1.19
TRIM54-202ENST00000380075 SLC35F5Q8WV83 523 aa22.48■■□□□ 1.19
TRIM54-202ENST00000380075 MAML1Q92585 1016 aa22.48■■□□□ 1.19
TRIM54-202ENST00000380075 ZNF560Q96MR9 790 aa22.48■■□□□ 1.19
TRIM54-202ENST00000380075 PEBP4Q96S96 227 aa22.48■■□□□ 1.19
TRIM54-202ENST00000380075 OSMRQ99650 979 aa22.48■■□□□ 1.19
TRIM54-202ENST00000380075 EIF2AQ9BY44 585 aaKnown RBP22.48■■□□□ 1.19
TRIM54-202ENST00000380075 CYLDQ9NQC7 956 aa22.48■■□□□ 1.19
TRIM54-202ENST00000380075 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.48■■□□□ 1.19
TRIM54-202ENST00000380075 GTF2IRD1Q9UHL9 959 aa22.48■■□□□ 1.19
TRIM54-202ENST00000380075 SLC24A2Q9UI40 661 aa22.48■■□□□ 1.19
TRIM54-202ENST00000380075 GINS2Q9Y248 185 aa22.48■■□□□ 1.19
TRIM54-202ENST00000380075 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.47■■□□□ 1.19
TRIM54-202ENST00000380075 ZNF487B1APH4 448 aa22.47■■□□□ 1.19
TRIM54-202ENST00000380075 PNPLA4P41247 253 aa22.47■■□□□ 1.19
TRIM54-202ENST00000380075 ZNF200P98182 395 aaPredicted RBP22.47■■□□□ 1.19
TRIM54-202ENST00000380075 SNX17Q15036 470 aa22.47■■□□□ 1.19
TRIM54-202ENST00000380075 C9orf57Q5W0N0 161 aa22.47■■□□□ 1.19
TRIM54-202ENST00000380075 CYP4V2Q6ZWL3 525 aaPredicted RBP22.47■■□□□ 1.19
TRIM54-202ENST00000380075 LRRC34Q8IZ02 419 aa22.47■■□□□ 1.19
TRIM54-202ENST00000380075 ZBED8Q8IZ13 594 aa22.47■■□□□ 1.19
TRIM54-202ENST00000380075 C12orf29Q8N999 325 aa22.47■■□□□ 1.19
TRIM54-202ENST00000380075 CPT1BQ92523 772 aa22.47■■□□□ 1.19
TRIM54-202ENST00000380075 KCNK9Q9NPC2 374 aa22.47■■□□□ 1.19
TRIM54-202ENST00000380075 NKIRAS1Q9NYS0 192 aa22.47■■□□□ 1.19
TRIM54-202ENST00000380075 SAE1Q9UBE0 346 aaPredicted RBP22.47■■□□□ 1.19
TRIM54-202ENST00000380075 RBP3P10745 1247 aa22.47■■□□□ 1.19
TRIM54-202ENST00000380075 PHBP35232 272 aa22.47■■□□□ 1.19
TRIM54-202ENST00000380075 RPL22P35268 128 aaKnown RBP22.47■■□□□ 1.19
TRIM54-202ENST00000380075 LIG3P49916 1009 aa22.47■■□□□ 1.19
TRIM54-202ENST00000380075 ROR1Q01973 937 aa22.47■■□□□ 1.19
TRIM54-202ENST00000380075 SLC20A2Q08357 652 aa22.47■■□□□ 1.19
TRIM54-202ENST00000380075 PDIA2Q13087 525 aaKnown RBP22.47■■□□□ 1.19
TRIM54-202ENST00000380075 TAF5Q15542 800 aa22.47■■□□□ 1.19
TRIM54-202ENST00000380075 TRIM60Q495X7 471 aa22.47■■□□□ 1.19
TRIM54-202ENST00000380075 C1orf53Q5VUE5 145 aa22.47■■□□□ 1.19
TRIM54-202ENST00000380075 GDF6Q6KF10 455 aaPredicted RBP22.47■■□□□ 1.19
TRIM54-202ENST00000380075 TRNP1Q6NT89 227 aa22.47■■□□□ 1.19
TRIM54-202ENST00000380075 ACOT1Q86TX2 421 aa22.47■■□□□ 1.19
TRIM54-202ENST00000380075 TTC30AQ86WT1 665 aa22.47■■□□□ 1.19
TRIM54-202ENST00000380075 MICALL1Q8N3F8 863 aa22.47■■□□□ 1.19
TRIM54-202ENST00000380075 SPATA18Q8TC71 538 aa22.47■■□□□ 1.19
TRIM54-202ENST00000380075 TRMT13Q9NUP7 481 aaKnown RBP22.47■■□□□ 1.19
TRIM54-202ENST00000380075 TUBGCP4Q9UGJ1 667 aa22.47■■□□□ 1.19
TRIM54-202ENST00000380075 E7ESA3 106 aa22.46■■□□□ 1.19
TRIM54-202ENST00000380075 PQBP1O60828 265 aaKnown RBP22.46■■□□□ 1.19
TRIM54-202ENST00000380075 RECQL4O94761 1208 aa22.46■■□□□ 1.19
TRIM54-202ENST00000380075 VIMP08670 466 aaKnown RBP22.46■■□□□ 1.19
TRIM54-202ENST00000380075 SDC4P31431 198 aa22.46■■□□□ 1.19
TRIM54-202ENST00000380075 SLC18A1P54219 525 aa22.46■■□□□ 1.19
TRIM54-202ENST00000380075 GDF10P55107 478 aa22.46■■□□□ 1.19
TRIM54-202ENST00000380075 ADAM17P78536 824 aa22.46■■□□□ 1.19
TRIM54-202ENST00000380075 TMEM62Q0P6H9 643 aa22.46■■□□□ 1.19
TRIM54-202ENST00000380075 DPYSL3Q14195 570 aa22.46■■□□□ 1.19
TRIM54-202ENST00000380075 CCDC14Q49A88 953 aa22.46■■□□□ 1.19
TRIM54-202ENST00000380075 PMF1Q6P1K2 205 aa22.46■■□□□ 1.19
TRIM54-202ENST00000380075 ARCQ7LC44 396 aa22.46■■□□□ 1.19
TRIM54-202ENST00000380075 CYP4X1Q8N118 509 aa22.46■■□□□ 1.19
TRIM54-202ENST00000380075 ATP11CQ8NB49 1132 aa22.46■■□□□ 1.19
TRIM54-202ENST00000380075 CKAP2Q8WWK9 683 aa22.46■■□□□ 1.19
TRIM54-202ENST00000380075 SGSM3Q96HU1 749 aa22.46■■□□□ 1.19
TRIM54-202ENST00000380075 TRPV6Q9H1D0 765 aa22.46■■□□□ 1.19
TRIM54-202ENST00000380075 VPS37BQ9H9H4 285 aa22.46■■□□□ 1.19
TRIM54-202ENST00000380075 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.46■■□□□ 1.19
TRIM54-202ENST00000380075 IFNAR2P48551 515 aa22.45■■□□□ 1.18
TRIM54-202ENST00000380075 KRT81Q14533 505 aa22.45■■□□□ 1.18
TRIM54-202ENST00000380075 FBXO47Q5MNV8 452 aa22.45■■□□□ 1.18
TRIM54-202ENST00000380075 TAX1BP1Q86VP1 789 aa22.45■■□□□ 1.18
TRIM54-202ENST00000380075 OR6B3Q8NGW1 331 aa22.45■■□□□ 1.18
TRIM54-202ENST00000380075 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.45■■□□□ 1.18
TRIM54-202ENST00000380075 RNF157Q96PX1 679 aa22.45■■□□□ 1.18
TRIM54-202ENST00000380075 GDAP2Q9NXN4 497 aa22.45■■□□□ 1.18
TRIM54-202ENST00000380075 ATP11BQ9Y2G3 1177 aa22.45■■□□□ 1.18
TRIM54-202ENST00000380075 C17orf102A2RUQ5 167 aa22.45■■□□□ 1.18
TRIM54-202ENST00000380075 CFAP69A5D8W1 941 aa22.45■■□□□ 1.18
TRIM54-202ENST00000380075 RASA4BC9J798 803 aa22.45■■□□□ 1.18
TRIM54-202ENST00000380075 PIRO00625 290 aa22.45■■□□□ 1.18
TRIM54-202ENST00000380075 PPEF2O14830 753 aa22.45■■□□□ 1.18
TRIM54-202ENST00000380075 MDM4O15151 490 aa22.45■■□□□ 1.18
TRIM54-202ENST00000380075 RASA4O43374 803 aa22.45■■□□□ 1.18
TRIM54-202ENST00000380075 GHRP10912 638 aa22.45■■□□□ 1.18
TRIM54-202ENST00000380075 KCNE1P15382 129 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms