RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 CCDC14Q49A88 953 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 MFSD14CQ5VZR4 134 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 FOXR1Q6PIV2 292 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 TDRPQ86YL5 185 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 TDHQ8IZJ6 230 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 SMG8Q8ND04 991 aaKnown RBP10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 PXYLP1Q8TE99 480 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 KBTBD7Q8WVZ9 684 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 LENG1Q96BZ8 264 aaPredicted RBP10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 HAUS1Q96CS2 278 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 PEBP4Q96S96 227 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 SELENOSQ9BQE4 189 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 TMEM121Q9BTD3 319 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 CALN1Q9BXU9 219 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 UPF3AQ9H1J1 476 aaKnown RBP10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 CXCL16Q9H2A7 254 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 CCDC134Q9H6E4 229 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 PRDM16Q9HAZ2 1276 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 SPC25Q9HBM1 224 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 LRRC4CQ9HCJ2 640 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 SAYSD1Q9NPB0 183 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 PPANQ9NQ55 473 aaKnown RBP10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 FAM49BQ9NUQ9 324 aa10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 FARP1Q9Y4F1 1045 aaPredicted RBP10.94□□□□□ -0.66
POLR2J3-201ENST00000379340 SCN10AQ9Y5Y9 1956 aa10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 ALOX15BO15296 676 aa10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 PAPSS1O43252 624 aaPredicted RBP10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 IFNB1P01574 187 aa10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 CHN1P15882 459 aa10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 PECAM1P16284 738 aaPredicted RBP10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 ARL4CP56559 192 aa10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 SLC8A3P57103 927 aa10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 IFI35P80217 286 aaPredicted RBP10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 ROR1Q01973 937 aa10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 DPYSL3Q14195 570 aa10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 RASA2Q15283 850 aa10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 LONRF1Q17RB8 773 aa10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 EFHC1Q5JVL4 640 aa10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 TWF2Q6IBS0 349 aaKnown RBP10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 TRNP1Q6NT89 227 aa10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 C4orf22Q6V702 233 aa10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 PPP1R21Q6ZMI0 780 aa10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 CYP4V2Q6ZWL3 525 aaPredicted RBP10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 RPAINQ86UA6 219 aa10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 FAM228AQ86W67 206 aa10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 ADGRF2Q8IZF7 708 aa10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 GLIS1Q8NBF1 620 aa10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 UHMK1Q8TAS1 419 aaKnown RBP10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 FAM172AQ8WUF8 416 aa10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 PRCCQ92733 491 aaPredicted RBP10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 P3H4Q92791 437 aa10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 ARHGEF2Q92974 986 aaKnown RBP10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 FAM161BQ96MY7 647 aa10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 RNF157Q96PX1 679 aa10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 ZNF670Q9BS34 389 aa10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 FRMD8Q9BZ67 464 aaPredicted RBP10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 FETUBQ9UGM5 382 aa10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 GTF2IRD1Q9UHL9 959 aa10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 NME7Q9Y5B8 376 aa10.93□□□□□ -0.66
POLR2J3-201ENST00000379340 APOL1O14791 398 aa10.92□□□□□ -0.66
POLR2J3-201ENST00000379340 XPO1O14980 1071 aaKnown RBP10.92□□□□□ -0.66
POLR2J3-201ENST00000379340 CD48P09326 243 aa10.92□□□□□ -0.66
POLR2J3-201ENST00000379340 C6orf222P0C671 652 aaPredicted RBP10.92□□□□□ -0.66
POLR2J3-201ENST00000379340 ZSCAN5DPP0CG00 497 aa10.92□□□□□ -0.66
POLR2J3-201ENST00000379340 RBP3P10745 1247 aa10.92□□□□□ -0.66
POLR2J3-201ENST00000379340 CYBAP13498 195 aa10.92□□□□□ -0.66
POLR2J3-201ENST00000379340 ZFXP17010 805 aaPredicted RBP10.92□□□□□ -0.66
POLR2J3-201ENST00000379340 PHBP35232 272 aa10.92□□□□□ -0.66
POLR2J3-201ENST00000379340 SLCO1A2P46721 670 aa10.92□□□□□ -0.66
POLR2J3-201ENST00000379340 ZNF200P98182 395 aaPredicted RBP10.92□□□□□ -0.66
POLR2J3-201ENST00000379340 CBLBQ13191 982 aa10.92□□□□□ -0.66
POLR2J3-201ENST00000379340 C15orf59Q2T9L4 293 aaPredicted RBP10.92□□□□□ -0.66
POLR2J3-201ENST00000379340 UBAP2Q5T6F2 1119 aaKnown RBP10.92□□□□□ -0.66
POLR2J3-201ENST00000379340 YTHDF3Q7Z739 585 aaKnown RBP10.92□□□□□ -0.66
POLR2J3-201ENST00000379340 EXOC3L1Q86VI1 746 aa10.92□□□□□ -0.66
POLR2J3-201ENST00000379340 SPATA18Q8TC71 538 aa10.92□□□□□ -0.66
POLR2J3-201ENST00000379340 CENPIQ92674 756 aaPredicted RBP10.92□□□□□ -0.66
POLR2J3-201ENST00000379340 FAF2Q96CS3 445 aa10.92□□□□□ -0.66
POLR2J3-201ENST00000379340 CHMP6Q96FZ7 201 aa10.92□□□□□ -0.66
POLR2J3-201ENST00000379340 PPP1R10Q96QC0 940 aaKnown RBP10.92□□□□□ -0.66
POLR2J3-201ENST00000379340 HNRNPABQ99729 332 aaKnown RBP10.92□□□□□ -0.66
POLR2J3-201ENST00000379340 UBE2OQ9C0C9 1292 aaKnown RBP10.92□□□□□ -0.66
POLR2J3-201ENST00000379340 DPEP3Q9H4B8 488 aa10.92□□□□□ -0.66
POLR2J3-201ENST00000379340 NGRNQ9NPE2 291 aaKnown RBP10.92□□□□□ -0.66
POLR2J3-201ENST00000379340 UBN1Q9NPG3 1134 aa10.92□□□□□ -0.66
POLR2J3-201ENST00000379340 INTS9Q9NV88 658 aaKnown RBP10.92□□□□□ -0.66
POLR2J3-201ENST00000379340 VCANP13611 3396 aa10.92□□□□□ -0.66
POLR2J3-201ENST00000379340 E7ESA3 106 aa10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 TULP2O00295 520 aa10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 SPTLC1O15269 473 aa10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 FGFR1P11362 822 aa10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 ETS1P14921 441 aa10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 PAX3P23760 479 aa10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 ADORA2BP29275 332 aa10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 RPL22P35268 128 aaKnown RBP10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 SEC24CP53992 1094 aa10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 LILRA4P59901 499 aa10.91□□□□□ -0.66
POLR2J3-201ENST00000379340 TAF5Q15542 800 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms