RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 UNC80Q8N2C7 3258 aa19.7■□□□□ 0.74
SSU72-203ENST00000378725 CYP1A1P04798 512 aaPredicted RBP19.69■□□□□ 0.74
SSU72-203ENST00000378725 ASGR2P07307 311 aa19.69■□□□□ 0.74
SSU72-203ENST00000378725 AVPR1AP37288 418 aa19.69■□□□□ 0.74
SSU72-203ENST00000378725 PRKCIP41743 596 aa19.69■□□□□ 0.74
SSU72-203ENST00000378725 DAOAP59103 153 aa19.69■□□□□ 0.74
SSU72-203ENST00000378725 SLC7A9P82251 487 aa19.69■□□□□ 0.74
SSU72-203ENST00000378725 E4F1Q66K89 784 aaPredicted RBP19.69■□□□□ 0.74
SSU72-203ENST00000378725 TRIM72Q6ZMU5 477 aa19.69■□□□□ 0.74
SSU72-203ENST00000378725 SCUBE3Q8IX30 993 aa19.69■□□□□ 0.74
SSU72-203ENST00000378725 ST13P5Q8NFI4 369 aaPredicted RBP19.69■□□□□ 0.74
SSU72-203ENST00000378725 CPLX3Q8WVH0 158 aa19.69■□□□□ 0.74
SSU72-203ENST00000378725 USP13Q92995 863 aaPredicted RBP19.69■□□□□ 0.74
SSU72-203ENST00000378725 PPP1R13BQ96KQ4 1090 aa19.69■□□□□ 0.74
SSU72-203ENST00000378725 NOX5Q96PH1 765 aa19.69■□□□□ 0.74
SSU72-203ENST00000378725 CPXM1Q96SM3 734 aa19.69■□□□□ 0.74
SSU72-203ENST00000378725 AGPAT1Q99943 283 aa19.69■□□□□ 0.74
SSU72-203ENST00000378725 SYT11Q9BT88 431 aa19.69■□□□□ 0.74
SSU72-203ENST00000378725 PLA2G2FQ9BZM2 168 aa19.69■□□□□ 0.74
SSU72-203ENST00000378725 ST7Q9NRC1 585 aa19.69■□□□□ 0.74
SSU72-203ENST00000378725 TDP1Q9NUW8 608 aa19.69■□□□□ 0.74
SSU72-203ENST00000378725 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.69■□□□□ 0.74
SSU72-203ENST00000378725 LUC7L2Q9Y383 392 aaKnown RBP19.69■□□□□ 0.74
SSU72-203ENST00000378725 DOCK8Q8NF50 2099 aa19.69■□□□□ 0.74
SSU72-203ENST00000378725 YJEFN3A6XGL0 299 aa19.68■□□□□ 0.74
SSU72-203ENST00000378725 E5RJQ4 531 aa19.68■□□□□ 0.74
SSU72-203ENST00000378725 E7ENQ6 273 aa19.68■□□□□ 0.74
SSU72-203ENST00000378725 PIK3R2O00459 728 aa19.68■□□□□ 0.74
SSU72-203ENST00000378725 COCHO43405 550 aa19.68■□□□□ 0.74
SSU72-203ENST00000378725 PRAMEF12O95522 483 aa19.68■□□□□ 0.74
SSU72-203ENST00000378725 RARGP13631 454 aa19.68■□□□□ 0.74
SSU72-203ENST00000378725 TCF3P15923 654 aa19.68■□□□□ 0.74
SSU72-203ENST00000378725 CASP14P31944 242 aa19.68■□□□□ 0.74
SSU72-203ENST00000378725 VIPR2P41587 438 aa19.68■□□□□ 0.74
SSU72-203ENST00000378725 YWHAGP61981 247 aaKnown RBP eCLIP19.68■□□□□ 0.74
SSU72-203ENST00000378725 TRIM14Q14142 442 aa19.68■□□□□ 0.74
SSU72-203ENST00000378725 ASIC2Q16515 512 aa19.68■□□□□ 0.74
SSU72-203ENST00000378725 KLHDC10Q6PID8 442 aa19.68■□□□□ 0.74
SSU72-203ENST00000378725 CELF5Q8N6W0 485 aaKnown RBP19.68■□□□□ 0.74
SSU72-203ENST00000378725 RSPRY1Q96DX4 576 aa19.68■□□□□ 0.74
SSU72-203ENST00000378725 LRRC3BQ96PB8 259 aa19.68■□□□□ 0.74
SSU72-203ENST00000378725 PCDHB18PQ96TA0 734 aa19.68■□□□□ 0.74
SSU72-203ENST00000378725 COL25A1Q9BXS0 654 aaPredicted RBP19.68■□□□□ 0.74
SSU72-203ENST00000378725 CCSER2Q9H7U1 834 aa19.68■□□□□ 0.74
SSU72-203ENST00000378725 NAGPAQ9UK23 515 aa19.68■□□□□ 0.74
SSU72-203ENST00000378725 ARHGAP26Q9UNA1 814 aa19.68■□□□□ 0.74
SSU72-203ENST00000378725 HEPACAM2A8MVW5 462 aa19.67■□□□□ 0.74
SSU72-203ENST00000378725 PAPSS1O43252 624 aaPredicted RBP19.67■□□□□ 0.74
SSU72-203ENST00000378725 TLR5O60602 858 aa19.67■□□□□ 0.74
SSU72-203ENST00000378725 RALAP11233 206 aa19.67■□□□□ 0.74
SSU72-203ENST00000378725 UNGP13051 313 aaPredicted RBP19.67■□□□□ 0.74
SSU72-203ENST00000378725 GABRB2P47870 512 aa19.67■□□□□ 0.74
SSU72-203ENST00000378725 ZNF75DP51815 510 aa19.67■□□□□ 0.74
SSU72-203ENST00000378725 SNX16P57768 344 aa19.67■□□□□ 0.74
SSU72-203ENST00000378725 NOMO3P69849 1222 aa19.67■□□□□ 0.74
SSU72-203ENST00000378725 TDGQ13569 410 aa19.67■□□□□ 0.74
SSU72-203ENST00000378725 ARID5BQ14865 1188 aa19.67■□□□□ 0.74
SSU72-203ENST00000378725 BSPRYQ5W0U4 402 aa19.67■□□□□ 0.74
SSU72-203ENST00000378725 VITQ6UXI7 678 aa19.67■□□□□ 0.74
SSU72-203ENST00000378725 MFSD6LQ8IWD5 586 aa19.67■□□□□ 0.74
SSU72-203ENST00000378725 OLIG1Q8TAK6 271 aa19.67■□□□□ 0.74
SSU72-203ENST00000378725 CLEC4CQ8WTT0 213 aa19.67■□□□□ 0.74
SSU72-203ENST00000378725 MRFAP1L1Q96HT8 127 aa19.67■□□□□ 0.74
SSU72-203ENST00000378725 CDK5RAP1Q96SZ6 601 aaKnown RBP19.67■□□□□ 0.74
SSU72-203ENST00000378725 KXD1Q9BQD3 176 aa19.67■□□□□ 0.74
SSU72-203ENST00000378725 MIS12Q9H081 205 aa19.67■□□□□ 0.74
SSU72-203ENST00000378725 SMG9Q9H0W8 520 aaKnown RBP19.67■□□□□ 0.74
SSU72-203ENST00000378725 KIF9Q9HAQ2 790 aa19.67■□□□□ 0.74
SSU72-203ENST00000378725 TJP2Q9UDY2 1190 aa19.67■□□□□ 0.74
SSU72-203ENST00000378725 SORCS3Q9UPU3 1222 aa19.67■□□□□ 0.74
SSU72-203ENST00000378725 CCL26Q9Y258 94 aa19.67■□□□□ 0.74
SSU72-203ENST00000378725 C5orf42Q9H799 3197 aa19.67■□□□□ 0.74
SSU72-203ENST00000378725 SART1O43290 800 aaKnown RBP19.66■□□□□ 0.74
SSU72-203ENST00000378725 CKMP06732 381 aa19.66■□□□□ 0.74
SSU72-203ENST00000378725 HNRNPH3P31942 346 aaKnown RBP19.66■□□□□ 0.74
SSU72-203ENST00000378725 ATP5C1P36542 298 aaKnown RBP19.66■□□□□ 0.74
SSU72-203ENST00000378725 ZXDBP98169 803 aa19.66■□□□□ 0.74
SSU72-203ENST00000378725 TBX2Q13207 712 aaPredicted RBP19.66■□□□□ 0.74
SSU72-203ENST00000378725 PTPN20Q4JDL3 420 aa19.66■□□□□ 0.74
SSU72-203ENST00000378725 TADA2BQ86TJ2 420 aa19.66■□□□□ 0.74
SSU72-203ENST00000378725 CPA5Q8WXQ8 436 aa19.66■□□□□ 0.74
SSU72-203ENST00000378725 HAUS4Q9H6D7 363 aa19.66■□□□□ 0.74
SSU72-203ENST00000378725 ABCC13Q9NSE7 274 aa19.66■□□□□ 0.74
SSU72-203ENST00000378725 BZW2Q9Y6E2 419 aaKnown RBP19.66■□□□□ 0.74
SSU72-203ENST00000378725 ZNF638Q14966 1978 aaKnown RBP19.66■□□□□ 0.74
SSU72-203ENST00000378725 OBSL1O75147 1896 aa19.65■□□□□ 0.74
SSU72-203ENST00000378725 DENND4CQ5VZ89 1909 aa19.65■□□□□ 0.74
SSU72-203ENST00000378725 MYH10P35580 1976 aa19.65■□□□□ 0.74
SSU72-203ENST00000378725 DPYSL4O14531 572 aa19.65■□□□□ 0.74
SSU72-203ENST00000378725 TBX18O95935 607 aa19.65■□□□□ 0.74
SSU72-203ENST00000378725 ERBB2P04626 1255 aa19.65■□□□□ 0.74
SSU72-203ENST00000378725 PSMC3P17980 439 aa19.65■□□□□ 0.74
SSU72-203ENST00000378725 KLHL30Q0D2K2 578 aa19.65■□□□□ 0.74
SSU72-203ENST00000378725 FCHO2Q0JRZ9 810 aa19.65■□□□□ 0.74
SSU72-203ENST00000378725 CLEC16AQ2KHT3 1053 aa19.65■□□□□ 0.74
SSU72-203ENST00000378725 NAA35Q5VZE5 725 aa19.65■□□□□ 0.74
SSU72-203ENST00000378725 HGSNATQ68CP4 663 aa19.65■□□□□ 0.74
SSU72-203ENST00000378725 HFE2Q6ZVN8 426 aa19.65■□□□□ 0.74
SSU72-203ENST00000378725 BEND5Q7L4P6 421 aa19.65■□□□□ 0.74
SSU72-203ENST00000378725 ZNF571Q7Z3V5 609 aaPredicted RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms