RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 PRPSAP2O60256 369 aa20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 FAM155BO75949 473 aa20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 C1QAP02745 245 aa20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 P4HA1P13674 534 aa20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 ATP2A2P16615 1042 aaKnown RBP20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 STIP1P31948 543 aaKnown RBP20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 ETV4P43268 484 aa20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 ZNF200P98182 395 aaPredicted RBP20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 TFDP2Q14188 446 aa20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 KRT81Q14533 505 aa20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 CA9Q16790 459 aa20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 FAM47CQ5HY64 1035 aa20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 FYB2Q5VWT5 728 aa20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 SH2D5Q6ZV89 423 aa20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 INPP5DQ92835 1189 aa20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 APOPT1Q96IL0 206 aa20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 MANSC1Q9H8J5 431 aa20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 RAB6BQ9NRW1 208 aa20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 ZFP69BQ9UJL9 534 aa20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 AKT3Q9Y243 479 aa20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 CHADO15335 359 aa20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 KCNN4O15554 427 aa20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 WFS1O76024 890 aa20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 LGALS2P05162 132 aa20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 DHRS4L1P0CG22 281 aa20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 ARHGAP1Q07960 439 aa20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 SLC45A4Q5BKX6 768 aa20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 SCYL2Q6P3W7 929 aa20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 MTDHQ86UE4 582 aaKnown RBP20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 LRRC6Q86X45 466 aa20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 FAM111AQ96PZ2 611 aa20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 VPS11Q9H270 941 aa20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 DPP3Q9NY33 737 aa20.32■□□□□ 0.84
SHROOM1-202ENST00000378676 IQANK1A0A1B0GTG1 560 aa20.31■□□□□ 0.84
SHROOM1-202ENST00000378676 DIAPH2O60879 1101 aa20.31■□□□□ 0.84
SHROOM1-202ENST00000378676 RBL1P28749 1068 aa20.31■□□□□ 0.84
SHROOM1-202ENST00000378676 EPHB2P29323 1055 aa20.31■□□□□ 0.84
SHROOM1-202ENST00000378676 CTC1Q2NKJ3 1217 aa20.31■□□□□ 0.84
SHROOM1-202ENST00000378676 IFNLR1Q8IU57 520 aaPredicted RBP20.31■□□□□ 0.84
SHROOM1-202ENST00000378676 TBC1D10AQ9BXI6 508 aa20.31■□□□□ 0.84
SHROOM1-202ENST00000378676 PLAC1Q9HBJ0 212 aa20.31■□□□□ 0.84
SHROOM1-202ENST00000378676 PCDH18Q9HCL0 1135 aa20.31■□□□□ 0.84
SHROOM1-202ENST00000378676 NGRNQ9NPE2 291 aaKnown RBP20.31■□□□□ 0.84
SHROOM1-202ENST00000378676 HEY1Q9Y5J3 304 aa20.31■□□□□ 0.84
SHROOM1-202ENST00000378676 PLXNB2O15031 1838 aa20.31■□□□□ 0.84
SHROOM1-202ENST00000378676 TROVE2P10155 538 aaKnown RBP eCLIP20.31■□□□□ 0.84
SHROOM1-202ENST00000378676 PYGBP11216 843 aa20.31■□□□□ 0.84
SHROOM1-202ENST00000378676 SLC18A2Q05940 514 aa20.31■□□□□ 0.84
SHROOM1-202ENST00000378676 TTLL4Q14679 1199 aa20.31■□□□□ 0.84
SHROOM1-202ENST00000378676 ZNF484Q5JVG2 852 aa20.31■□□□□ 0.84
SHROOM1-202ENST00000378676 PPP1R26Q5T8A7 1209 aaPredicted RBP20.31■□□□□ 0.84
SHROOM1-202ENST00000378676 PMF1Q6P1K2 205 aa20.31■□□□□ 0.84
SHROOM1-202ENST00000378676 OLFML1Q6UWY5 402 aa20.31■□□□□ 0.84
SHROOM1-202ENST00000378676 CLNKQ7Z7G1 428 aa20.31■□□□□ 0.84
SHROOM1-202ENST00000378676 FAM13CQ8NE31 585 aa20.31■□□□□ 0.84
SHROOM1-202ENST00000378676 NME7Q9Y5B8 376 aa20.31■□□□□ 0.84
SHROOM1-202ENST00000378676 INHBAP08476 426 aa20.3■□□□□ 0.84
SHROOM1-202ENST00000378676 ZNF286BP0CG31 522 aa20.3■□□□□ 0.84
SHROOM1-202ENST00000378676 LONP2Q86WA8 852 aa20.3■□□□□ 0.84
SHROOM1-202ENST00000378676 TTC30AQ86WT1 665 aa20.3■□□□□ 0.84
SHROOM1-202ENST00000378676 PCDH19Q8TAB3 1148 aa20.3■□□□□ 0.84
SHROOM1-202ENST00000378676 ZNF398Q8TD17 642 aa20.3■□□□□ 0.84
SHROOM1-202ENST00000378676 FAM172AQ8WUF8 416 aa20.3■□□□□ 0.84
SHROOM1-202ENST00000378676 TTC17Q96AE7 1141 aa20.3■□□□□ 0.84
SHROOM1-202ENST00000378676 SNRNP25Q9BV90 132 aaKnown RBP20.3■□□□□ 0.84
SHROOM1-202ENST00000378676 NT5C1AQ9BXI3 368 aa20.3■□□□□ 0.84
SHROOM1-202ENST00000378676 POPDC2Q9HBU9 364 aa20.3■□□□□ 0.84
SHROOM1-202ENST00000378676 PAK5Q9P286 719 aa20.3■□□□□ 0.84
SHROOM1-202ENST00000378676 NKX1-2Q9UD57 310 aaPredicted RBP20.3■□□□□ 0.84
SHROOM1-202ENST00000378676 ITGA11Q9UKX5 1188 aa20.3■□□□□ 0.84
SHROOM1-202ENST00000378676 GM2AP17900 193 aa20.3■□□□□ 0.84
SHROOM1-202ENST00000378676 POU5F1BQ06416 359 aa20.3■□□□□ 0.84
SHROOM1-202ENST00000378676 KHSRPQ92945 711 aaKnown RBP eCLIP20.3■□□□□ 0.84
SHROOM1-202ENST00000378676 RTP4Q96DX8 246 aa20.3■□□□□ 0.84
SHROOM1-202ENST00000378676 PRR11Q96HE9 360 aaPredicted RBP20.3■□□□□ 0.84
SHROOM1-202ENST00000378676 ZNF570Q96NI8 536 aa20.3■□□□□ 0.84
SHROOM1-202ENST00000378676 TSSK1BQ9BXA7 367 aa20.3■□□□□ 0.84
SHROOM1-202ENST00000378676 FAM49BQ9NUQ9 324 aa20.3■□□□□ 0.84
SHROOM1-202ENST00000378676 IKBKGQ9Y6K9 419 aa20.3■□□□□ 0.84
SHROOM1-202ENST00000378676 PDCD11Q14690 1871 aaKnown RBP20.29■□□□□ 0.84
SHROOM1-202ENST00000378676 CXorf49A8MYA2 514 aaPredicted RBP20.29■□□□□ 0.84
SHROOM1-202ENST00000378676 DPYSL4O14531 572 aa20.29■□□□□ 0.84
SHROOM1-202ENST00000378676 APOL1O14791 398 aa20.29■□□□□ 0.84
SHROOM1-202ENST00000378676 PPEF2O14830 753 aa20.29■□□□□ 0.84
SHROOM1-202ENST00000378676 TSPAN1O60635 241 aa20.29■□□□□ 0.84
SHROOM1-202ENST00000378676 GABBR2O75899 941 aa20.29■□□□□ 0.84
SHROOM1-202ENST00000378676 TFE3P19532 575 aaPredicted RBP20.29■□□□□ 0.84
SHROOM1-202ENST00000378676 BGNP21810 368 aa20.29■□□□□ 0.84
SHROOM1-202ENST00000378676 RBP5P82980 135 aa20.29■□□□□ 0.84
SHROOM1-202ENST00000378676 CDHR3Q6ZTQ4 885 aa20.29■□□□□ 0.84
SHROOM1-202ENST00000378676 CAND1Q86VP6 1230 aaKnown RBP20.29■□□□□ 0.84
SHROOM1-202ENST00000378676 CHSY1Q86X52 802 aa20.29■□□□□ 0.84
SHROOM1-202ENST00000378676 MRPL45Q9BRJ2 306 aaKnown RBP20.29■□□□□ 0.84
SHROOM1-202ENST00000378676 SYT17Q9BSW7 474 aa20.29■□□□□ 0.84
SHROOM1-202ENST00000378676 A0A0G2JND7 137 aa20.29■□□□□ 0.84
SHROOM1-202ENST00000378676 PEX11AO75192 247 aa20.29■□□□□ 0.84
SHROOM1-202ENST00000378676 BCAR1P56945 870 aa20.29■□□□□ 0.84
SHROOM1-202ENST00000378676 SPDYAQ5MJ70 313 aa20.29■□□□□ 0.84
SHROOM1-202ENST00000378676 ERO1BQ86YB8 467 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms