RNA–Protein interactions for RNA: ENST00000378540.8

PPM1B-203, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 2

Gene PPM1B, Length 1,703 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-203ENST00000378540 HAPLN1P10915 354 aaPredicted RBP24.28■■□□□ 1.48
PPM1B-203ENST00000378540 CTNNB1P35222 781 aa24.28■■□□□ 1.48
PPM1B-203ENST00000378540 MAGEA10P43363 369 aaPredicted RBP24.28■■□□□ 1.48
PPM1B-203ENST00000378540 LLGL1Q15334 1064 aa24.28■■□□□ 1.48
PPM1B-203ENST00000378540 LONRF2Q1L5Z9 754 aa24.28■■□□□ 1.48
PPM1B-203ENST00000378540 RASIP1Q5U651 963 aa24.28■■□□□ 1.48
PPM1B-203ENST00000378540 LRRC38Q5VT99 294 aa24.28■■□□□ 1.48
PPM1B-203ENST00000378540 PM20D1Q6GTS8 502 aa24.28■■□□□ 1.48
PPM1B-203ENST00000378540 SCYL2Q6P3W7 929 aa24.28■■□□□ 1.48
PPM1B-203ENST00000378540 CCDC50Q8IVM0 306 aa24.28■■□□□ 1.48
PPM1B-203ENST00000378540 KATNAL2Q8IYT4 538 aa24.28■■□□□ 1.48
PPM1B-203ENST00000378540 NUP93Q8N1F7 819 aa24.28■■□□□ 1.48
PPM1B-203ENST00000378540 GOLGA1Q92805 767 aa24.28■■□□□ 1.48
PPM1B-203ENST00000378540 ACSF2Q96CM8 615 aaPredicted RBP24.28■■□□□ 1.48
PPM1B-203ENST00000378540 NAALADL1Q9UQQ1 740 aa24.28■■□□□ 1.48
PPM1B-203ENST00000378540 USP3Q9Y6I4 520 aa24.28■■□□□ 1.48
PPM1B-203ENST00000378540 LTFP02788 710 aa24.27■■□□□ 1.48
PPM1B-203ENST00000378540 IL1R2P27930 398 aa24.27■■□□□ 1.48
PPM1B-203ENST00000378540 PTPN9P43378 593 aa24.27■■□□□ 1.48
PPM1B-203ENST00000378540 SLC25A11Q02978 314 aaKnown RBP24.27■■□□□ 1.48
PPM1B-203ENST00000378540 NAA30Q147X3 362 aaPredicted RBP24.27■■□□□ 1.48
PPM1B-203ENST00000378540 SMTNL2Q2TAL5 461 aa24.27■■□□□ 1.48
PPM1B-203ENST00000378540 ODF2Q5BJF6 829 aa24.27■■□□□ 1.48
PPM1B-203ENST00000378540 TEX35Q5T0J7 233 aa24.27■■□□□ 1.48
PPM1B-203ENST00000378540 ADAT2Q7Z6V5 191 aaKnown RBP24.27■■□□□ 1.48
PPM1B-203ENST00000378540 SPATA4Q8NEY3 305 aa24.27■■□□□ 1.48
PPM1B-203ENST00000378540 IRGQQ8WZA9 623 aa24.27■■□□□ 1.48
PPM1B-203ENST00000378540 SLC2A13Q96QE2 648 aa24.27■■□□□ 1.48
PPM1B-203ENST00000378540 TBCBQ99426 244 aa24.27■■□□□ 1.48
PPM1B-203ENST00000378540 USP18Q9UMW8 372 aa24.27■■□□□ 1.48
PPM1B-203ENST00000378540 EFCAB8A8MWE9 144 aa24.27■■□□□ 1.48
PPM1B-203ENST00000378540 GRXCR1A8MXD5 290 aa24.27■■□□□ 1.48
PPM1B-203ENST00000378540 PI4K2BG5E9Z4 385 aa24.27■■□□□ 1.48
PPM1B-203ENST00000378540 ZRANB2O95218 330 aaKnown RBP eCLIP24.27■■□□□ 1.48
PPM1B-203ENST00000378540 TRUB2O95900 331 aaKnown RBP24.27■■□□□ 1.48
PPM1B-203ENST00000378540 KRT1P04264 644 aa24.27■■□□□ 1.48
PPM1B-203ENST00000378540 MYOGP15173 224 aa24.27■■□□□ 1.48
PPM1B-203ENST00000378540 NOS2P35228 1153 aa24.27■■□□□ 1.48
PPM1B-203ENST00000378540 PCK1P35558 622 aa24.27■■□□□ 1.48
PPM1B-203ENST00000378540 SULT1E1P49888 294 aa24.27■■□□□ 1.48
PPM1B-203ENST00000378540 SMC1AQ14683 1233 aaKnown RBP24.27■■□□□ 1.48
PPM1B-203ENST00000378540 KCNT1Q5JUK3 1230 aa24.27■■□□□ 1.48
PPM1B-203ENST00000378540 SYPL2Q5VXT5 272 aa24.27■■□□□ 1.48
PPM1B-203ENST00000378540 BHLHA9Q7RTU4 235 aa24.27■■□□□ 1.48
PPM1B-203ENST00000378540 RNF25Q96BH1 459 aaPredicted RBP24.27■■□□□ 1.48
PPM1B-203ENST00000378540 PLVAPQ9BX97 442 aa24.27■■□□□ 1.48
PPM1B-203ENST00000378540 AP1M1Q9BXS5 423 aa24.27■■□□□ 1.48
PPM1B-203ENST00000378540 PATJQ8NI35 1801 aa24.26■■□□□ 1.47
PPM1B-203ENST00000378540 PRPSAP2O60256 369 aa24.26■■□□□ 1.47
PPM1B-203ENST00000378540 FYNP06241 537 aa24.26■■□□□ 1.47
PPM1B-203ENST00000378540 KRT7P08729 469 aa24.26■■□□□ 1.47
PPM1B-203ENST00000378540 NCAM1P13591 858 aa24.26■■□□□ 1.47
PPM1B-203ENST00000378540 BMPR1AP36894 532 aa24.26■■□□□ 1.47
PPM1B-203ENST00000378540 SHHQ15465 462 aa24.26■■□□□ 1.47
PPM1B-203ENST00000378540 ZNF572Q7Z3I7 529 aaPredicted RBP24.26■■□□□ 1.47
PPM1B-203ENST00000378540 SCML4Q8N228 414 aa24.26■■□□□ 1.47
PPM1B-203ENST00000378540 EDEM1Q92611 657 aa24.26■■□□□ 1.47
PPM1B-203ENST00000378540 RPGRIP1Q96KN7 1286 aa24.26■■□□□ 1.47
PPM1B-203ENST00000378540 ADAM33Q9BZ11 813 aa24.26■■□□□ 1.47
PPM1B-203ENST00000378540 ZBP1Q9H171 429 aa24.26■■□□□ 1.47
PPM1B-203ENST00000378540 DDX56Q9NY93 547 aaKnown RBP24.26■■□□□ 1.47
PPM1B-203ENST00000378540 STK39Q9UEW8 545 aa24.26■■□□□ 1.47
PPM1B-203ENST00000378540 TTC7AQ9ULT0 858 aaPredicted RBP24.26■■□□□ 1.47
PPM1B-203ENST00000378540 SYNJ2BP-COX16A0A087WUM0 186 aa24.25■■□□□ 1.47
PPM1B-203ENST00000378540 TERF1P54274 439 aa24.25■■□□□ 1.47
PPM1B-203ENST00000378540 RPL10AP62906 217 aaKnown RBP24.25■■□□□ 1.47
PPM1B-203ENST00000378540 SLC25A52Q3SY17 297 aa24.25■■□□□ 1.47
PPM1B-203ENST00000378540 BSPRYQ5W0U4 402 aa24.25■■□□□ 1.47
PPM1B-203ENST00000378540 NOA1Q8NC60 698 aaKnown RBP24.25■■□□□ 1.47
PPM1B-203ENST00000378540 EXD1Q8NHP7 514 aa24.25■■□□□ 1.47
PPM1B-203ENST00000378540 ZNF461Q8TAF7 563 aa24.25■■□□□ 1.47
PPM1B-203ENST00000378540 GIPC2Q8TF65 315 aa24.25■■□□□ 1.47
PPM1B-203ENST00000378540 UBXN4Q92575 508 aa24.25■■□□□ 1.47
PPM1B-203ENST00000378540 HSPH1Q92598 858 aa24.25■■□□□ 1.47
PPM1B-203ENST00000378540 PEBP4Q96S96 227 aa24.25■■□□□ 1.47
PPM1B-203ENST00000378540 ALG13Q9NP73 1137 aaKnown RBP24.25■■□□□ 1.47
PPM1B-203ENST00000378540 COX16Q9P0S2 106 aa24.25■■□□□ 1.47
PPM1B-203ENST00000378540 AFF4Q9UHB7 1163 aaKnown RBP24.25■■□□□ 1.47
PPM1B-203ENST00000378540 STAP1Q9ULZ2 295 aa24.25■■□□□ 1.47
PPM1B-203ENST00000378540 LINC01553A4QN01 128 aa24.24■■□□□ 1.47
PPM1B-203ENST00000378540 KRIT1O00522 736 aa24.24■■□□□ 1.47
PPM1B-203ENST00000378540 CSPG5O95196 566 aa24.24■■□□□ 1.47
PPM1B-203ENST00000378540 ATXN1P54253 815 aaKnown RBP24.24■■□□□ 1.47
PPM1B-203ENST00000378540 HDAC4P56524 1084 aa24.24■■□□□ 1.47
PPM1B-203ENST00000378540 USP46P62068 366 aa24.24■■□□□ 1.47
PPM1B-203ENST00000378540 PITX1P78337 314 aaPredicted RBP24.24■■□□□ 1.47
PPM1B-203ENST00000378540 ERCC6LQ2NKX8 1250 aa24.24■■□□□ 1.47
PPM1B-203ENST00000378540 FAM109BQ6ICB4 259 aaPredicted RBP24.24■■□□□ 1.47
PPM1B-203ENST00000378540 POLNQ7Z5Q5 900 aa24.24■■□□□ 1.47
PPM1B-203ENST00000378540 RCOR2Q8IZ40 523 aa24.24■■□□□ 1.47
PPM1B-203ENST00000378540 TSC1Q92574 1164 aa24.24■■□□□ 1.47
PPM1B-203ENST00000378540 CENPIQ92674 756 aaPredicted RBP24.24■■□□□ 1.47
PPM1B-203ENST00000378540 NAP1L3Q99457 506 aaPredicted RBP24.24■■□□□ 1.47
PPM1B-203ENST00000378540 C11orf84Q9BUA3 381 aaPredicted RBP24.24■■□□□ 1.47
PPM1B-203ENST00000378540 RBM12Q9NTZ6 932 aaKnown RBP24.24■■□□□ 1.47
PPM1B-203ENST00000378540 CTIFO43310 598 aaKnown RBP24.24■■□□□ 1.47
PPM1B-203ENST00000378540 ABLIM3O94929 683 aa24.24■■□□□ 1.47
PPM1B-203ENST00000378540 SEC24AO95486 1093 aa24.24■■□□□ 1.47
PPM1B-203ENST00000378540 CXCL14O95715 111 aa24.24■■□□□ 1.47
PPM1B-203ENST00000378540 CTSAP10619 480 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms