RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 CCDC60Q8IWA6 550 aaPredicted RBP15.55■□□□□ 0.08
NPHP4-201ENST00000378156 RXFP2Q8WXD0 754 aa15.55■□□□□ 0.08
NPHP4-201ENST00000378156 CCDC134Q9H6E4 229 aa15.55■□□□□ 0.08
NPHP4-201ENST00000378156 CHCHD3Q9NX63 227 aaKnown RBP15.55■□□□□ 0.08
NPHP4-201ENST00000378156 GJB6O95452 261 aa15.55■□□□□ 0.08
NPHP4-201ENST00000378156 UBA1P22314 1058 aaKnown RBP15.55■□□□□ 0.08
NPHP4-201ENST00000378156 TAF2Q6P1X5 1199 aa15.55■□□□□ 0.08
NPHP4-201ENST00000378156 CCDC33Q8N5R6 958 aa15.55■□□□□ 0.08
NPHP4-201ENST00000378156 ACTL9Q8TC94 416 aa15.55■□□□□ 0.08
NPHP4-201ENST00000378156 NAF1Q96HR8 494 aaKnown RBP15.55■□□□□ 0.08
NPHP4-201ENST00000378156 ZBTB45Q96K62 511 aaPredicted RBP15.55■□□□□ 0.08
NPHP4-201ENST00000378156 EML4Q9HC35 981 aaKnown RBP15.55■□□□□ 0.08
NPHP4-201ENST00000378156 CHST7Q9NS84 486 aa15.55■□□□□ 0.08
NPHP4-201ENST00000378156 DDX28Q9NUL7 540 aaKnown RBP15.55■□□□□ 0.08
NPHP4-201ENST00000378156 NSMCE4AQ9NXX6 385 aa15.55■□□□□ 0.08
NPHP4-201ENST00000378156 BARX2Q9UMQ3 279 aaPredicted RBP15.55■□□□□ 0.08
NPHP4-201ENST00000378156 NRXN3Q9Y4C0 1643 aa15.55■□□□□ 0.08
NPHP4-201ENST00000378156 C16orf96A6NNT2 1141 aa15.55■□□□□ 0.08
NPHP4-201ENST00000378156 B2RBV5 119 aa15.55■□□□□ 0.08
NPHP4-201ENST00000378156 HNRNPCL2B2RXH8 293 aa15.55■□□□□ 0.08
NPHP4-201ENST00000378156 MRPS15P82914 257 aaKnown RBP15.55■□□□□ 0.08
NPHP4-201ENST00000378156 SLC27A1Q6PCB7 646 aa15.55■□□□□ 0.08
NPHP4-201ENST00000378156 POTEAQ6S8J7 498 aa15.55■□□□□ 0.08
NPHP4-201ENST00000378156 FAM131BQ86XD5 332 aa15.55■□□□□ 0.08
NPHP4-201ENST00000378156 MAGEB18Q96M61 343 aa15.55■□□□□ 0.08
NPHP4-201ENST00000378156 RPRD1AQ96P16 312 aaPredicted RBP15.55■□□□□ 0.08
NPHP4-201ENST00000378156 SLFN11Q7Z7L1 901 aa15.55■□□□□ 0.08
NPHP4-201ENST00000378156 MIB1Q86YT6 1006 aa15.55■□□□□ 0.08
NPHP4-201ENST00000378156 ARID3BQ8IVW6 561 aaPredicted RBP15.55■□□□□ 0.08
NPHP4-201ENST00000378156 SEPT8Q92599 483 aa15.55■□□□□ 0.08
NPHP4-201ENST00000378156 THTPAQ9BU02 230 aa15.55■□□□□ 0.08
NPHP4-201ENST00000378156 GPATCH2LQ9NWQ4 482 aa15.55■□□□□ 0.08
NPHP4-201ENST00000378156 USP18Q9UMW8 372 aa15.55■□□□□ 0.08
NPHP4-201ENST00000378156 HOXA2O43364 376 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 NQO1P15559 274 aaKnown RBP15.54■□□□□ 0.08
NPHP4-201ENST00000378156 LBRQ14739 615 aaKnown RBP15.54■□□□□ 0.08
NPHP4-201ENST00000378156 THEMIS2Q5TEJ8 643 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 TATDN1Q6P1N9 297 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 TLK2Q86UE8 772 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 TEX12Q9BXU0 123 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 TASP1Q9H6P5 420 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 STARD7Q9NQZ5 370 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 PDP2Q9P2J9 529 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 HAO1Q9UJM8 370 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 ZNF229Q9UJW7 825 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 MTO1Q9Y2Z2 717 aaKnown RBP15.54■□□□□ 0.08
NPHP4-201ENST00000378156 TGFB1I1O43294 461 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 ANXA9O76027 345 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 AKR1A1P14550 325 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 FDFT1P37268 417 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 MARCKSL1P49006 195 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 PPIL2Q13356 520 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 ACVR2BQ13705 512 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 LRRC6Q86X45 466 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 E2F7Q96AV8 911 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 RMDN2Q96LZ7 410 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 HSD17B14Q9BPX1 270 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 MTG1Q9BT17 334 aaPredicted RBP15.54■□□□□ 0.08
NPHP4-201ENST00000378156 DSEQ9UL01 958 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 UBIAD1Q9Y5Z9 338 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 NID2Q14112 1375 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 TMCC1O94876 653 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 ACADSP16219 412 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 KCNA2P16389 499 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 TNFRSF8P28908 595 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 ETFBP38117 255 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 ADCYAP1R1P41586 468 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 INPP5AQ14642 412 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 TTC39BQ5VTQ0 682 aaPredicted RBP15.54■□□□□ 0.08
NPHP4-201ENST00000378156 IQSEC1Q6DN90 963 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 MSL3Q8N5Y2 521 aaKnown RBP15.54■□□□□ 0.08
NPHP4-201ENST00000378156 SH3KBP1Q96B97 665 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 ELMO2Q96JJ3 720 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 GRID1Q9ULK0 1009 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 E7ENQ6 273 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 PMPCBO75439 489 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 FBXO21O94952 628 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 DAB2P98082 770 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 CHI3L2Q15782 390 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 LRRC36Q1X8D7 754 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 LINC00523Q86TU6 105 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 NDUFA13Q9P0J0 144 aa15.54■□□□□ 0.08
NPHP4-201ENST00000378156 SLC11A2P49281 568 aa15.53■□□□□ 0.08
NPHP4-201ENST00000378156 BST2Q10589 180 aaKnown RBP15.53■□□□□ 0.08
NPHP4-201ENST00000378156 NFE2Q16621 373 aaPredicted RBP15.53■□□□□ 0.08
NPHP4-201ENST00000378156 HGSNATQ68CP4 663 aa15.53■□□□□ 0.08
NPHP4-201ENST00000378156 NLRP9Q7RTR0 991 aa15.53■□□□□ 0.08
NPHP4-201ENST00000378156 PACS2Q86VP3 889 aa15.53■□□□□ 0.08
NPHP4-201ENST00000378156 PORCNQ9H237 461 aa15.53■□□□□ 0.08
NPHP4-201ENST00000378156 SHBGP04278 402 aa15.53■□□□□ 0.08
NPHP4-201ENST00000378156 MAP4P27816 1152 aaKnown RBP15.53■□□□□ 0.08
NPHP4-201ENST00000378156 NDST1P52848 882 aa15.53■□□□□ 0.08
NPHP4-201ENST00000378156 CYTH1Q15438 398 aa15.53■□□□□ 0.08
NPHP4-201ENST00000378156 DDX53Q86TM3 631 aaKnown RBP15.53■□□□□ 0.08
NPHP4-201ENST00000378156 FBXO32Q969P5 355 aa15.53■□□□□ 0.08
NPHP4-201ENST00000378156 CMTM5Q96DZ9 223 aa15.53■□□□□ 0.08
NPHP4-201ENST00000378156 PAFAH2Q99487 392 aa15.53■□□□□ 0.08
NPHP4-201ENST00000378156 FHDC1Q9C0D6 1143 aaPredicted RBP15.53■□□□□ 0.08
NPHP4-201ENST00000378156 KDM4CQ9H3R0 1056 aa15.53■□□□□ 0.08
NPHP4-201ENST00000378156 AAASQ9NRG9 546 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms