RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 MAGEA4P43358 317 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 RAD23BP54727 409 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 CUL1Q13616 776 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 C16orf46Q6P387 395 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 CENPUQ71F23 418 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 IFNL1Q8IU54 200 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 SLC9A9Q8IVB4 645 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 CFAP52Q8N1V2 620 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 EFHBQ8N7U6 833 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 FBF1Q8TES7 1133 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 TNIP3Q96KP6 325 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 TMEM209Q96SK2 561 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 ISCUQ9H1K1 167 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 PCMTD2Q9NV79 361 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 VANGL2Q9ULK5 521 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 STRIP2Q9ULQ0 834 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 TNFSF13BQ9Y275 285 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 ARID1BQ8NFD5 2236 aaPredicted RBP8.44□□□□□ -1.06
CKAP2-203ENST00000378037 MYH9P35579 1960 aaKnown RBP8.44□□□□□ -1.06
CKAP2-203ENST00000378037 ASXL3Q9C0F0 2248 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 RBBP6Q7Z6E9 1792 aaKnown RBP8.44□□□□□ -1.06
CKAP2-203ENST00000378037 MANSC4A6NHS7 340 aaPredicted RBP8.44□□□□□ -1.06
CKAP2-203ENST00000378037 PODXLO00592 558 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 APOL1O14791 398 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 PJA2O43164 708 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 LYPLA2O95372 231 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 KRT7P08729 469 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 GZMAP12544 262 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 CLUL1Q15846 466 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 ACCSLQ4AC99 568 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 EFHC2Q5JST6 749 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 IQSEC1Q6DN90 963 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 OVOS1Q6IE37 1185 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 CCDC62Q6P9F0 684 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 CACNA2D3Q8IZS8 1091 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 SLC4A11Q8NBS3 891 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 FBXO36Q8NEA4 188 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 SPOCK2Q92563 424 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 ALKBH8Q96BT7 664 aaKnown RBP8.44□□□□□ -1.06
CKAP2-203ENST00000378037 MS4A4AQ96JQ5 239 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 PLEKHA5Q9HAU0 1116 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 FAM105AQ9NUU6 356 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 CYTH4Q9UIA0 394 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 RRP15Q9Y3B9 282 aaKnown RBP8.44□□□□□ -1.06
CKAP2-203ENST00000378037 RRN3P2A6NIE6 340 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 KBTBD13C9JR72 458 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 AGRPO00253 132 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 P4HA2O15460 535 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 DDX3YO15523 660 aaKnown RBP8.43□□□□□ -1.06
CKAP2-203ENST00000378037 LRCH4O75427 683 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 GRIA1P42261 906 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 MARSP56192 900 aaKnown RBP8.43□□□□□ -1.06
CKAP2-203ENST00000378037 SREBF2Q12772 1141 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 ITGA7Q13683 1181 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 TFDP3Q5H9I0 405 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 FBXW10Q5XX13 1052 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 ZCCHC23Q6ZST2 131 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 UNC5BQ8IZJ1 945 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 ARRDC4Q8NCT1 418 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 DBF4BQ8NFT6 615 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 OR6K2Q8NGY2 324 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 ZNF560Q96MR9 790 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 ABCG8Q9H221 673 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 RSAD1Q9HA92 442 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 TTC28Q96AY4 2481 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 VCANP13611 3396 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 PPFIA2O75334 1257 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 BEST1O76090 585 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 STK10O94804 968 aaKnown RBP8.43□□□□□ -1.06
CKAP2-203ENST00000378037 ITGB1P05556 798 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 CYP2C18P33260 490 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 GPR15P49685 360 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 ZNF844Q08AG5 666 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 MTFR1Q15390 333 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 FBXO48Q5FWF7 155 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 SYPL2Q5VXT5 272 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 TAOK1Q7L7X3 1001 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 PLPPR4Q7Z2D5 763 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 RBM23Q86U06 439 aaKnown RBP8.43□□□□□ -1.06
CKAP2-203ENST00000378037 ZDHHC14Q8IZN3 488 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 NRCAMQ92823 1304 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 HES6Q96HZ4 224 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 TBCBQ99426 244 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 SNRNP25Q9BV90 132 aaKnown RBP8.43□□□□□ -1.06
CKAP2-203ENST00000378037 EEF2KO00418 725 aaKnown RBP8.43□□□□□ -1.06
CKAP2-203ENST00000378037 IL18RAPO95256 599 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 IVLP07476 585 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 KRT4P19013 534 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 RFX1P22670 979 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 ANXA13P27216 316 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 ELF1P32519 619 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 LSP1P33241 339 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 POU6F1Q14863 301 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 CTXN3Q4LDR2 81 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 SH3D19Q5HYK7 790 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 GKAP1Q5VSY0 366 aaPredicted RBP8.43□□□□□ -1.06
CKAP2-203ENST00000378037 ANKRD22Q5VYY1 191 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 KCNT2Q6UVM3 1135 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 ANKS1BQ7Z6G8 1248 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 ANKS4BQ8N8V4 417 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms