RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 CAND2O75155 1236 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 DUSP11O75319 330 aaKnown RBP15.06■□□□□ 0
TCOF1-202ENST00000377797 DCTN3O75935 186 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 POLBP06746 335 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 KITP10721 976 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 ESRRAP11474 423 aaPredicted RBP15.06■□□□□ 0
TCOF1-202ENST00000377797 YBX3P16989 372 aaKnown RBP eCLIP15.06■□□□□ 09e-6■□□□□ 10.4
TCOF1-202ENST00000377797 MMP8P22894 467 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 MAP3K10Q02779 954 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 MMEL1Q495T6 779 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 TTC8Q8TAM2 541 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 LSM7Q9UK45 103 aaKnown RBP15.06■□□□□ 0
TCOF1-202ENST00000377797 TSPAN1O60635 241 aa15.05■□□□□ 0
TCOF1-202ENST00000377797 EFEMP1Q12805 493 aa15.05■□□□□ 0
TCOF1-202ENST00000377797 ELAVL2Q12926 359 aaKnown RBP15.05■□□□□ 0
TCOF1-202ENST00000377797 PIGZQ86VD9 579 aa15.05■□□□□ 0
TCOF1-202ENST00000377797 ATP6V0D2Q8N8Y2 350 aa15.05■□□□□ 0
TCOF1-202ENST00000377797 ALKBH8Q96BT7 664 aaKnown RBP15.05■□□□□ 0
TCOF1-202ENST00000377797 AJAP1Q9UKB5 411 aaPredicted RBP15.05■□□□□ 0
TCOF1-202ENST00000377797 TBKBP1A7MCY6 615 aa15.05■□□□□ 0
TCOF1-202ENST00000377797 DPYSL4O14531 572 aa15.05■□□□□ 0
TCOF1-202ENST00000377797 TTC4O95801 387 aa15.05■□□□□ 0
TCOF1-202ENST00000377797 TMC3Q7Z5M5 1100 aa15.05■□□□□ 0
TCOF1-202ENST00000377797 LRRC6Q86X45 466 aa15.05■□□□□ 0
TCOF1-202ENST00000377797 RIBC1Q8N443 379 aaPredicted RBP15.05■□□□□ 0
TCOF1-202ENST00000377797 PPHLN1Q8NEY8 458 aaKnown RBP15.05■□□□□ 0
TCOF1-202ENST00000377797 CRYGNQ8WXF5 182 aa15.05■□□□□ 0
TCOF1-202ENST00000377797 FZD8Q9H461 694 aa15.05■□□□□ 0
TCOF1-202ENST00000377797 GOLGA2P5Q9HBQ8 144 aa15.05■□□□□ 0
TCOF1-202ENST00000377797 SAE1Q9UBE0 346 aaPredicted RBP15.05■□□□□ 0
TCOF1-202ENST00000377797 PMPCBO75439 489 aa15.05■□□□□ -0
TCOF1-202ENST00000377797 SNRPAP09012 282 aaKnown RBP15.05■□□□□ -0
TCOF1-202ENST00000377797 TAC1P20366 129 aa15.05■□□□□ -0
TCOF1-202ENST00000377797 RPL10AP62906 217 aaKnown RBP15.05■□□□□ -0
TCOF1-202ENST00000377797 RNF135Q8IUD6 432 aa15.05■□□□□ -0
TCOF1-202ENST00000377797 B3GALNT2Q8NCR0 500 aa15.05■□□□□ -0
TCOF1-202ENST00000377797 RSRC1Q96IZ7 334 aaKnown RBP15.05■□□□□ -0
TCOF1-202ENST00000377797 MTIF3Q9H2K0 278 aaKnown RBP15.05■□□□□ -0
TCOF1-202ENST00000377797 IPPQ9Y573 584 aa15.05■□□□□ -0
TCOF1-202ENST00000377797 SMIM28A0A1B0GU29 152 aa15.05■□□□□ -0
TCOF1-202ENST00000377797 AMPD1P23109 780 aa15.05■□□□□ -0
TCOF1-202ENST00000377797 KDELR1P24390 212 aa15.05■□□□□ -0
TCOF1-202ENST00000377797 FDFT1P37268 417 aa15.05■□□□□ -0
TCOF1-202ENST00000377797 FAM183BPQ6ZVS7 135 aa15.05■□□□□ -0
TCOF1-202ENST00000377797 HSFY1Q96LI6 401 aa15.05■□□□□ -0
TCOF1-202ENST00000377797 TUBGCP4Q9UGJ1 667 aa15.05■□□□□ -0
TCOF1-202ENST00000377797 UBA6A0AVT1 1052 aaPredicted RBP15.04■□□□□ -0
TCOF1-202ENST00000377797 NNMTP40261 264 aa15.04■□□□□ -0
TCOF1-202ENST00000377797 GEMIN4P57678 1058 aaKnown RBP15.04■□□□□ -0
TCOF1-202ENST00000377797 LRRC38Q5VT99 294 aa15.04■□□□□ -0
TCOF1-202ENST00000377797 NAPEPLDQ6IQ20 393 aa15.04■□□□□ -0
TCOF1-202ENST00000377797 TBC1D1Q86TI0 1168 aaPredicted RBP15.04■□□□□ -0
TCOF1-202ENST00000377797 ETFBP38117 255 aa15.04■□□□□ -0
TCOF1-202ENST00000377797 ANKRD52Q8NB46 1076 aa15.04■□□□□ -0
TCOF1-202ENST00000377797 ELOVL4Q9GZR5 314 aa15.04■□□□□ -0
TCOF1-202ENST00000377797 TMBIM4Q9HC24 238 aa15.04■□□□□ -0
TCOF1-202ENST00000377797 ZNF446Q9NWS9 450 aa15.04■□□□□ -0
TCOF1-202ENST00000377797 JCHAINP01591 159 aa15.04■□□□□ -0
TCOF1-202ENST00000377797 USP17L7P0C7H9 530 aa15.04■□□□□ -0
TCOF1-202ENST00000377797 SERPINB9P50453 376 aa15.04■□□□□ -0
TCOF1-202ENST00000377797 LRRC37BQ96QE4 947 aa15.04■□□□□ -0
TCOF1-202ENST00000377797 APOBEC3GQ9HC16 384 aaKnown RBP15.04■□□□□ -0
TCOF1-202ENST00000377797 PCDHB5Q9Y5E4 795 aa15.04■□□□□ -0
TCOF1-202ENST00000377797 MYBL2P10244 700 aa15.04■□□□□ -0
TCOF1-202ENST00000377797 NPR3P17342 541 aa15.04■□□□□ -0
TCOF1-202ENST00000377797 ZNF143P52747 638 aaPredicted RBP15.04■□□□□ -0
TCOF1-202ENST00000377797 TAS2R40P59535 323 aa15.04■□□□□ -0
TCOF1-202ENST00000377797 PTPN20Q4JDL3 420 aa15.04■□□□□ -0
TCOF1-202ENST00000377797 PPP1R26Q5T8A7 1209 aaPredicted RBP15.04■□□□□ -0
TCOF1-202ENST00000377797 SLC25A41Q8N5S1 370 aa15.04■□□□□ -0
TCOF1-202ENST00000377797 TSEN2Q8NCE0 465 aaKnown RBP15.04■□□□□ -0
TCOF1-202ENST00000377797 NAV1Q8NEY1 1877 aa15.04■□□□□ -0
TCOF1-202ENST00000377797 NHSQ6T4R5 1651 aa15.04■□□□□ -0
TCOF1-202ENST00000377797 DNALI1O14645 258 aaPredicted RBP15.03■□□□□ -0
TCOF1-202ENST00000377797 LTFP02788 710 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 STX1BP61266 288 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 ZNF473Q8WTR7 871 aaKnown RBP15.03■□□□□ -0
TCOF1-202ENST00000377797 ZFP42Q96MM3 310 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 C10orf88Q9H8K7 445 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 SARS2Q9NP81 518 aaKnown RBP15.03■□□□□ -0
TCOF1-202ENST00000377797 C20orf96Q9NUD7 363 aaPredicted RBP15.03■□□□□ -0
TCOF1-202ENST00000377797 PCMTD2Q9NV79 361 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 BCAP29Q9UHQ4 241 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 SHOC2Q9UQ13 582 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 RPS6KL1Q9Y6S9 549 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 SLC12A8A0AV02 714 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 APOC4-APOC2K7ER74 178 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 APOC2P02655 101 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 ARFIP2P53365 341 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 CCL14Q16627 93 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 ASIC4Q96FT7 647 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 MRPL45Q9BRJ2 306 aaKnown RBP15.03■□□□□ -0
TCOF1-202ENST00000377797 EIF2AQ9BY44 585 aaKnown RBP15.03■□□□□ -0
TCOF1-202ENST00000377797 MUC3BQ9H195 1237 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 ZMYM2Q9UBW7 1377 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 CACNA1SQ13698 1873 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 ASGR1P07306 291 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 PECAM1P16284 738 aaPredicted RBP15.03■□□□□ -0
TCOF1-202ENST00000377797 NFKBIAP25963 317 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 KCTD19Q17RG1 926 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms