RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 ATRIPQ8WXE1 791 aa17.74■□□□□ 0.43
HMGN4-201ENST00000377575 CHFRQ96EP1 664 aa17.74■□□□□ 0.43
HMGN4-201ENST00000377575 CYLDQ9NQC7 956 aa17.74■□□□□ 0.43
HMGN4-201ENST00000377575 TBC1D14Q9P2M4 693 aa17.74■□□□□ 0.43
HMGN4-201ENST00000377575 SH3BP1Q9Y3L3 701 aa17.74■□□□□ 0.43
HMGN4-201ENST00000377575 E2F8A0AVK6 867 aa17.73■□□□□ 0.43
HMGN4-201ENST00000377575 PAPSS2O95340 614 aaPredicted RBP17.73■□□□□ 0.43
HMGN4-201ENST00000377575 LMNAP02545 664 aaKnown RBP17.73■□□□□ 0.43
HMGN4-201ENST00000377575 CD19P15391 556 aa17.73■□□□□ 0.43
HMGN4-201ENST00000377575 PSEN1P49768 467 aa17.73■□□□□ 0.43
HMGN4-201ENST00000377575 BCAT1P54687 386 aa17.73■□□□□ 0.43
HMGN4-201ENST00000377575 SATB1Q01826 763 aa17.73■□□□□ 0.43
HMGN4-201ENST00000377575 KCNH2Q12809 1159 aa17.73■□□□□ 0.43
HMGN4-201ENST00000377575 GAS6Q14393 721 aa17.73■□□□□ 0.43
HMGN4-201ENST00000377575 GOLGA7BQ2TAP0 167 aa17.73■□□□□ 0.43
HMGN4-201ENST00000377575 FBXO43Q4G163 708 aa17.73■□□□□ 0.43
HMGN4-201ENST00000377575 TSSK4Q6SA08 328 aa17.73■□□□□ 0.43
HMGN4-201ENST00000377575 CCDC186Q7Z3E2 898 aa17.73■□□□□ 0.43
HMGN4-201ENST00000377575 ANKRD52Q8NB46 1076 aa17.73■□□□□ 0.43
HMGN4-201ENST00000377575 CD101Q93033 1021 aa17.73■□□□□ 0.43
HMGN4-201ENST00000377575 OTUB2Q96DC9 234 aa17.73■□□□□ 0.43
HMGN4-201ENST00000377575 ZFRQ96KR1 1074 aaKnown RBP17.73■□□□□ 0.43
HMGN4-201ENST00000377575 CDK5RAP1Q96SZ6 601 aaKnown RBP17.73■□□□□ 0.43
HMGN4-201ENST00000377575 UBXN6Q9BZV1 441 aa17.73■□□□□ 0.43
HMGN4-201ENST00000377575 NUP62CLQ9H1M0 184 aa17.73■□□□□ 0.43
HMGN4-201ENST00000377575 LINC00597Q9H2U6 94 aa17.73■□□□□ 0.43
HMGN4-201ENST00000377575 HESX1Q9UBX0 185 aa17.73■□□□□ 0.43
HMGN4-201ENST00000377575 ATG2BQ96BY7 2078 aa17.72■□□□□ 0.43
HMGN4-201ENST00000377575 MYOFQ9NZM1 2061 aa17.72■□□□□ 0.43
HMGN4-201ENST00000377575 ATG13O75143 517 aa17.72■□□□□ 0.43
HMGN4-201ENST00000377575 ADH1CP00326 375 aa17.72■□□□□ 0.43
HMGN4-201ENST00000377575 CYP17A1P05093 508 aa17.72■□□□□ 0.43
HMGN4-201ENST00000377575 ATP5C1P36542 298 aaKnown RBP17.72■□□□□ 0.43
HMGN4-201ENST00000377575 UBR7Q8N806 425 aa17.72■□□□□ 0.43
HMGN4-201ENST00000377575 ZBTB44Q8NCP5 570 aa17.72■□□□□ 0.43
HMGN4-201ENST00000377575 CCDC26Q8TAB7 109 aa17.72■□□□□ 0.43
HMGN4-201ENST00000377575 NELL1Q92832 810 aa17.72■□□□□ 0.43
HMGN4-201ENST00000377575 CNOT6LQ96LI5 555 aaKnown RBP17.72■□□□□ 0.43
HMGN4-201ENST00000377575 GBP4Q96PP9 640 aa17.72■□□□□ 0.43
HMGN4-201ENST00000377575 DACH1Q9UI36 760 aa17.72■□□□□ 0.43
HMGN4-201ENST00000377575 NAGPAQ9UK23 515 aa17.72■□□□□ 0.43
HMGN4-201ENST00000377575 TSPAN16Q9UKR8 245 aa17.72■□□□□ 0.43
HMGN4-201ENST00000377575 KIAA1257Q9ULG3 409 aa17.72■□□□□ 0.43
HMGN4-201ENST00000377575 FAM186AA6NE01 2351 aa17.71■□□□□ 0.43
HMGN4-201ENST00000377575 A0A1W2PQH9 124 aa17.71■□□□□ 0.43
HMGN4-201ENST00000377575 EGFP01133 1207 aa17.71■□□□□ 0.43
HMGN4-201ENST00000377575 PAEPP09466 180 aa17.71■□□□□ 0.43
HMGN4-201ENST00000377575 RALAP11233 206 aa17.71■□□□□ 0.43
HMGN4-201ENST00000377575 VDRP11473 427 aa17.71■□□□□ 0.43
HMGN4-201ENST00000377575 TDGF1P13385 188 aa17.71■□□□□ 0.43
HMGN4-201ENST00000377575 RARGP13631 454 aa17.71■□□□□ 0.43
HMGN4-201ENST00000377575 GALK1P51570 392 aa17.71■□□□□ 0.43
HMGN4-201ENST00000377575 GCNT1Q02742 428 aa17.71■□□□□ 0.43
HMGN4-201ENST00000377575 BST2Q10589 180 aaKnown RBP17.71■□□□□ 0.43
HMGN4-201ENST00000377575 TPD52L1Q16890 204 aaPredicted RBP17.71■□□□□ 0.43
HMGN4-201ENST00000377575 KLHDC10Q6PID8 442 aa17.71■□□□□ 0.43
HMGN4-201ENST00000377575 TMEM270Q6UE05 265 aa17.71■□□□□ 0.43
HMGN4-201ENST00000377575 PIGZQ86VD9 579 aa17.71■□□□□ 0.43
HMGN4-201ENST00000377575 ARHGAP18Q8N392 663 aa17.71■□□□□ 0.43
HMGN4-201ENST00000377575 LMO3Q8TAP4 145 aa17.71■□□□□ 0.43
HMGN4-201ENST00000377575 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.71■□□□□ 0.43
HMGN4-201ENST00000377575 PCDHB4Q9Y5E5 795 aa17.71■□□□□ 0.43
HMGN4-201ENST00000377575 USP3Q9Y6I4 520 aa17.71■□□□□ 0.43
HMGN4-201ENST00000377575 SCAMP3O14828 347 aaKnown RBP17.7■□□□□ 0.42
HMGN4-201ENST00000377575 XPO1O14980 1071 aaKnown RBP17.7■□□□□ 0.42
HMGN4-201ENST00000377575 RNF40O75150 1001 aa17.7■□□□□ 0.42
HMGN4-201ENST00000377575 SETSIPP0DME0 302 aa17.7■□□□□ 0.42
HMGN4-201ENST00000377575 IRF1P10914 325 aa17.7■□□□□ 0.42
HMGN4-201ENST00000377575 PGFP49763 221 aa17.7■□□□□ 0.42
HMGN4-201ENST00000377575 DHCR24Q15392 516 aa17.7■□□□□ 0.42
HMGN4-201ENST00000377575 RAB41Q5JT25 222 aa17.7■□□□□ 0.42
HMGN4-201ENST00000377575 C10orf120Q5SQS8 335 aa17.7■□□□□ 0.42
HMGN4-201ENST00000377575 TTC30AQ86WT1 665 aa17.7■□□□□ 0.42
HMGN4-201ENST00000377575 ADGRG2Q8IZP9 1017 aa17.7■□□□□ 0.42
HMGN4-201ENST00000377575 EHBP1Q8NDI1 1231 aa17.7■□□□□ 0.42
HMGN4-201ENST00000377575 INTS2Q9H0H0 1204 aaKnown RBP17.7■□□□□ 0.42
HMGN4-201ENST00000377575 OSER1Q9NX31 292 aa17.7■□□□□ 0.42
HMGN4-201ENST00000377575 CLIC5Q9NZA1 410 aa17.7■□□□□ 0.42
HMGN4-201ENST00000377575 DNMT3LQ9UJW3 386 aa17.7■□□□□ 0.42
HMGN4-201ENST00000377575 LSM7Q9UK45 103 aaKnown RBP17.7■□□□□ 0.42
HMGN4-201ENST00000377575 RIF1Q5UIP0 2472 aaKnown RBP17.7■□□□□ 0.42
HMGN4-201ENST00000377575 O00370 1275 aa17.69■□□□□ 0.42
HMGN4-201ENST00000377575 LILRB5O75023 590 aa17.69■□□□□ 0.42
HMGN4-201ENST00000377575 ADH5P11766 374 aa17.69■□□□□ 0.42
HMGN4-201ENST00000377575 EIF2DP41214 584 aaKnown RBP17.69■□□□□ 0.42
HMGN4-201ENST00000377575 STILQ15468 1287 aa17.69■□□□□ 0.42
HMGN4-201ENST00000377575 NAIF1Q69YI7 327 aaPredicted RBP17.69■□□□□ 0.42
HMGN4-201ENST00000377575 RRAGAQ7L523 313 aa17.69■□□□□ 0.42
HMGN4-201ENST00000377575 CREBRFQ8IUR6 639 aa17.69■□□□□ 0.42
HMGN4-201ENST00000377575 ZNF276Q8N554 614 aa17.69■□□□□ 0.42
HMGN4-201ENST00000377575 KLF16Q9BXK1 252 aaPredicted RBP17.69■□□□□ 0.42
HMGN4-201ENST00000377575 NMUR1Q9HB89 426 aa17.69■□□□□ 0.42
HMGN4-201ENST00000377575 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.68■□□□□ 0.42
HMGN4-201ENST00000377575 CHURC1-FNTBB4DL54 471 aa17.68■□□□□ 0.42
HMGN4-201ENST00000377575 GOLGA6L22H0YM25 854 aa17.68■□□□□ 0.42
HMGN4-201ENST00000377575 TBX18O95935 607 aa17.68■□□□□ 0.42
HMGN4-201ENST00000377575 OPRD1P41143 372 aa17.68■□□□□ 0.42
HMGN4-201ENST00000377575 PLA2G4AP47712 749 aa17.68■□□□□ 0.42
HMGN4-201ENST00000377575 TKTL1P51854 596 aa17.68■□□□□ 0.42
HMGN4-201ENST00000377575 PDE4CQ08493 712 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms