RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 LILRB1Q8NHL6 650 aaPredicted RBP16.13■□□□□ 0.17
FXN-201ENST00000377270 NSUN6Q8TEA1 469 aaKnown RBP16.13■□□□□ 0.17
FXN-201ENST00000377270 BSNDQ8WZ55 320 aa16.13■□□□□ 0.17
FXN-201ENST00000377270 STMN2Q93045 179 aa16.13■□□□□ 0.17
FXN-201ENST00000377270 CLEC11AQ9Y240 323 aa16.13■□□□□ 0.17
FXN-201ENST00000377270 STARD13Q9Y3M8 1113 aa16.13■□□□□ 0.17
FXN-201ENST00000377270 PCDHGA3Q9Y5H0 932 aa16.13■□□□□ 0.17
FXN-201ENST00000377270 ADCY6O43306 1168 aa16.12■□□□□ 0.17
FXN-201ENST00000377270 SORBS3O60504 671 aa16.12■□□□□ 0.17
FXN-201ENST00000377270 PHF2O75151 1096 aa16.12■□□□□ 0.17
FXN-201ENST00000377270 PARNO95453 639 aaKnown RBP16.12■□□□□ 0.17
FXN-201ENST00000377270 SGPL1O95470 568 aa16.12■□□□□ 0.17
FXN-201ENST00000377270 CHRNA3P32297 505 aa16.12■□□□□ 0.17
FXN-201ENST00000377270 DSG3P32926 999 aa16.12■□□□□ 0.17
FXN-201ENST00000377270 CHKAP35790 457 aa16.12■□□□□ 0.17
FXN-201ENST00000377270 RALGDSQ12967 914 aa16.12■□□□□ 0.17
FXN-201ENST00000377270 STRN3Q13033 797 aa16.12■□□□□ 0.17
FXN-201ENST00000377270 SF3B4Q15427 424 aaKnown RBP eCLIP16.12■□□□□ 0.17
FXN-201ENST00000377270 MAP4K3Q8IVH8 894 aa16.12■□□□□ 0.17
FXN-201ENST00000377270 REPS2Q8NFH8 660 aa16.12■□□□□ 0.17
FXN-201ENST00000377270 PTCD2Q8WV60 388 aaKnown RBP16.12■□□□□ 0.17
FXN-201ENST00000377270 OSCP1Q8WVF1 389 aa16.12■□□□□ 0.17
FXN-201ENST00000377270 GPATCH1Q9BRR8 931 aaKnown RBP16.12■□□□□ 0.17
FXN-201ENST00000377270 EBF3Q9H4W6 596 aa16.12■□□□□ 0.17
FXN-201ENST00000377270 TLE6Q9H808 572 aa16.12■□□□□ 0.17
FXN-201ENST00000377270 NKIRAS1Q9NYS0 192 aa16.12■□□□□ 0.17
FXN-201ENST00000377270 GOLGA8CPA6NN73 597 aa16.12■□□□□ 0.17
FXN-201ENST00000377270 TSPAN1O60635 241 aa16.12■□□□□ 0.17
FXN-201ENST00000377270 HMOX2P30519 316 aa16.12■□□□□ 0.17
FXN-201ENST00000377270 SLC5A2P31639 672 aa16.12■□□□□ 0.17
FXN-201ENST00000377270 TSPY1Q01534 308 aa16.12■□□□□ 0.17
FXN-201ENST00000377270 ZNF211Q13398 564 aaPredicted RBP16.12■□□□□ 0.17
FXN-201ENST00000377270 GRM2Q14416 872 aa16.12■□□□□ 0.17
FXN-201ENST00000377270 RHOT2Q8IXI1 618 aa16.12■□□□□ 0.17
FXN-201ENST00000377270 SEMA4DQ92854 862 aa16.12■□□□□ 0.17
FXN-201ENST00000377270 ART4Q93070 314 aa16.12■□□□□ 0.17
FXN-201ENST00000377270 MED30Q96HR3 178 aa16.12■□□□□ 0.17
FXN-201ENST00000377270 SENP7Q9BQF6 1050 aa16.12■□□□□ 0.17
FXN-201ENST00000377270 PCYOX1Q9UHG3 505 aa16.12■□□□□ 0.17
FXN-201ENST00000377270 ZNF112Q9UJU3 913 aa16.12■□□□□ 0.17
FXN-201ENST00000377270 ZNF214Q9UL59 606 aaPredicted RBP16.12■□□□□ 0.17
FXN-201ENST00000377270 PCDHA3Q9Y5H8 950 aa16.12■□□□□ 0.17
FXN-201ENST00000377270 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.12■□□□□ 0.17
FXN-201ENST00000377270 GUCY1B2O75343 617 aa16.11■□□□□ 0.17
FXN-201ENST00000377270 RGS20O76081 388 aa16.11■□□□□ 0.17
FXN-201ENST00000377270 CHEK2O96017 543 aa16.11■□□□□ 0.17
FXN-201ENST00000377270 CDH3P22223 829 aa16.11■□□□□ 0.17
FXN-201ENST00000377270 PTPN4P29074 926 aa16.11■□□□□ 0.17
FXN-201ENST00000377270 TMEM132BQ14DG7 1078 aa16.11■□□□□ 0.17
FXN-201ENST00000377270 ZNF568Q3ZCX4 644 aa16.11■□□□□ 0.17
FXN-201ENST00000377270 ANGEL2Q5VTE6 544 aaKnown RBP16.11■□□□□ 0.17
FXN-201ENST00000377270 CCDC25Q86WR0 208 aa16.11■□□□□ 0.17
FXN-201ENST00000377270 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.11■□□□□ 0.17
FXN-201ENST00000377270 ZFP28Q8NHY6 868 aa16.11■□□□□ 0.17
FXN-201ENST00000377270 ACP6Q9NPH0 428 aa16.11■□□□□ 0.17
FXN-201ENST00000377270 CCDC177Q9NQR7 707 aaPredicted RBP16.11■□□□□ 0.17
FXN-201ENST00000377270 VPS51Q9UID3 782 aa16.11■□□□□ 0.17
FXN-201ENST00000377270 HEMK1Q9Y5R4 338 aaPredicted RBP16.11■□□□□ 0.17
FXN-201ENST00000377270 CBX6O95503 412 aa16.11■□□□□ 0.17
FXN-201ENST00000377270 FOXN2P32314 431 aa16.11■□□□□ 0.17
FXN-201ENST00000377270 RAB15P59190 212 aa16.11■□□□□ 0.17
FXN-201ENST00000377270 KCNJ8Q15842 424 aa16.11■□□□□ 0.17
FXN-201ENST00000377270 C15orf59Q2T9L4 293 aaPredicted RBP16.11■□□□□ 0.17
FXN-201ENST00000377270 FYB2Q5VWT5 728 aa16.11■□□□□ 0.17
FXN-201ENST00000377270 PLPP6Q8IY26 295 aa16.11■□□□□ 0.17
FXN-201ENST00000377270 PPP4R1Q8TF05 950 aa16.11■□□□□ 0.17
FXN-201ENST00000377270 POMGNT1Q8WZA1 660 aa16.11■□□□□ 0.17
FXN-201ENST00000377270 KREMEN1Q96MU8 473 aa16.11■□□□□ 0.17
FXN-201ENST00000377270 RBM38Q9H0Z9 239 aaKnown RBP16.11■□□□□ 0.17
FXN-201ENST00000377270 FOXO6A8MYZ6 492 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 PFDN6O15212 129 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 PMM2O15305 246 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 CYP26A1O43174 497 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 DNAJC6O75061 913 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 PSAPP07602 524 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 STT3AP46977 705 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 ENTPD1P49961 510 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 MFAP3P55082 362 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 TRIM71Q2Q1W2 868 aaKnown RBP16.1■□□□□ 0.17
FXN-201ENST00000377270 KRT39Q6A163 491 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 PPP1R21Q6ZMI0 780 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 FAM71AQ8IYT1 594 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 ALDH16A1Q8IZ83 802 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 PCDHB18PQ96TA0 734 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 NTPCRQ9BSD7 190 aaKnown RBP16.1■□□□□ 0.17
FXN-201ENST00000377270 CDC42EP4Q9H3Q1 356 aaKnown RBP16.1■□□□□ 0.17
FXN-201ENST00000377270 CHORDC1Q9UHD1 332 aaPredicted RBP16.1■□□□□ 0.17
FXN-201ENST00000377270 PCDHGA8Q9Y5G5 932 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 ALG6Q9Y672 507 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 STBD1O95210 358 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 ACSL3O95573 720 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 HSPA6P17066 643 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 OAZ1P54368 228 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 GPC5P78333 572 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 IL9RQ01113 521 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 NADK2Q4G0N4 442 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 HSP90AA5PQ58FG0 334 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 SPDYAQ5MJ70 313 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 NOP9Q86U38 636 aaKnown RBP16.1■□□□□ 0.17
FXN-201ENST00000377270 SLC47A2Q86VL8 602 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms