RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 PQLC3Q8N755 202 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 AFG1LQ8WV93 481 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 KHSRPQ92945 711 aaKnown RBP eCLIP11.11□□□□□ -0.63
ABCF1-202ENST00000376545 KLF6Q99612 283 aaPredicted RBP11.11□□□□□ -0.63
ABCF1-202ENST00000376545 BTBD10Q9BSF8 475 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 CALN1Q9BXU9 219 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 RAB6CQ9H0N0 254 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 R3HDMLQ9H3Y0 253 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 POPDC2Q9HBU9 364 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.11□□□□□ -0.63
ABCF1-202ENST00000376545 PRMT7Q9NVM4 692 aaPredicted RBP11.11□□□□□ -0.63
ABCF1-202ENST00000376545 GTF2IRD1Q9UHL9 959 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 BARX2Q9UMQ3 279 aaPredicted RBP11.11□□□□□ -0.63
ABCF1-202ENST00000376545 CFAP69A5D8W1 941 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 M0QYV0 167 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 HBP1O60381 514 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 CCDC22O60826 627 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 C22orf31O95567 290 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 KRT19P08727 400 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 PYGBP11216 843 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 CDH6P55285 790 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 TNFAIP2Q03169 654 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 CCDC14Q49A88 953 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 FAM102AQ5T9C2 384 aaPredicted RBP11.11□□□□□ -0.63
ABCF1-202ENST00000376545 EFCAB12Q6NXP0 572 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 MCUQ8NE86 351 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 RXFP2Q8WXD0 754 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 SYNCQ9H7C4 482 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 ARL8BQ9NVJ2 186 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 HEY2Q9UBP5 337 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 WDR91A4D1P6 747 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 INO80B-WBP1J3KQ70 363 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 LMNAP02545 664 aaKnown RBP11.11□□□□□ -0.63
ABCF1-202ENST00000376545 OVGP1Q12889 678 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 VGLL4Q14135 290 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 SEPT7Q16181 437 aaKnown RBP11.11□□□□□ -0.63
ABCF1-202ENST00000376545 SLC10A6Q3KNW5 377 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 FAM183BPQ6ZVS7 135 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 CDR2LQ86X02 465 aaPredicted RBP11.11□□□□□ -0.63
ABCF1-202ENST00000376545 TTC39CQ8N584 583 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 TRAPPC12Q8WVT3 735 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 LRRC39Q96DD0 335 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 NSL1Q96IY1 281 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 PIWIL1Q96J94 861 aaKnown RBP11.11□□□□□ -0.63
ABCF1-202ENST00000376545 INO80BQ9C086 356 aaPredicted RBP11.11□□□□□ -0.63
ABCF1-202ENST00000376545 MIS12Q9H081 205 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 SMARCAD1Q9H4L7 1026 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 PDZD7Q9H5P4 517 aa11.11□□□□□ -0.63
ABCF1-202ENST00000376545 GSC2O15499 205 aa11.1□□□□□ -0.63
ABCF1-202ENST00000376545 AVILO75366 819 aa11.1□□□□□ -0.63
ABCF1-202ENST00000376545 INHBAP08476 426 aa11.1□□□□□ -0.63
ABCF1-202ENST00000376545 ARFIP2P53365 341 aa11.1□□□□□ -0.63
ABCF1-202ENST00000376545 BLMHQ13867 455 aa11.1□□□□□ -0.63
ABCF1-202ENST00000376545 BOLA3Q53S33 107 aa11.1□□□□□ -0.63
ABCF1-202ENST00000376545 C4orf22Q6V702 233 aa11.1□□□□□ -0.63
ABCF1-202ENST00000376545 CDHR3Q6ZTQ4 885 aa11.1□□□□□ -0.63
ABCF1-202ENST00000376545 ZC3H18Q86VM9 953 aaKnown RBP11.1□□□□□ -0.63
ABCF1-202ENST00000376545 NLRP4Q96MN2 994 aa11.1□□□□□ -0.63
ABCF1-202ENST00000376545 C7orf26Q96N11 449 aa11.1□□□□□ -0.63
ABCF1-202ENST00000376545 FAM111AQ96PZ2 611 aa11.1□□□□□ -0.63
ABCF1-202ENST00000376545 TMEM120AQ9BXJ8 343 aa11.1□□□□□ -0.63
ABCF1-202ENST00000376545 ASCC2Q9H1I8 757 aaPredicted RBP11.1□□□□□ -0.63
ABCF1-202ENST00000376545 DCLRE1BQ9H816 532 aa11.1□□□□□ -0.63
ABCF1-202ENST00000376545 DCTN4Q9UJW0 460 aa11.1□□□□□ -0.63
ABCF1-202ENST00000376545 PLLPQ9Y342 182 aa11.1□□□□□ -0.63
ABCF1-202ENST00000376545 DICER1Q9UPY3 1922 aaKnown RBP11.1□□□□□ -0.63
ABCF1-202ENST00000376545 CITO14578 2027 aa11.1□□□□□ -0.63
ABCF1-202ENST00000376545 RFPL1O75677 317 aa11.1□□□□□ -0.63
ABCF1-202ENST00000376545 SMNDC1O75940 238 aaKnown RBP eCLIP11.1□□□□□ -0.63
ABCF1-202ENST00000376545 P4HA1P13674 534 aa11.1□□□□□ -0.63
ABCF1-202ENST00000376545 PDGFRAP16234 1089 aa11.1□□□□□ -0.63
ABCF1-202ENST00000376545 ABL2P42684 1182 aa11.1□□□□□ -0.63
ABCF1-202ENST00000376545 SERPINB4P48594 390 aa11.1□□□□□ -0.63
ABCF1-202ENST00000376545 MRPS5P82675 430 aaKnown RBP11.1□□□□□ -0.63
ABCF1-202ENST00000376545 KYAT1Q16773 422 aa11.1□□□□□ -0.63
ABCF1-202ENST00000376545 C15orf59Q2T9L4 293 aaPredicted RBP11.1□□□□□ -0.63
ABCF1-202ENST00000376545 HSF5Q4G112 596 aaPredicted RBP11.1□□□□□ -0.63
ABCF1-202ENST00000376545 OLFML1Q6UWY5 402 aa11.1□□□□□ -0.63
ABCF1-202ENST00000376545 CYS1Q717R9 158 aa11.1□□□□□ -0.63
ABCF1-202ENST00000376545 NCAPG2Q86XI2 1143 aa11.1□□□□□ -0.63
ABCF1-202ENST00000376545 NAF1Q96HR8 494 aaKnown RBP11.1□□□□□ -0.63
ABCF1-202ENST00000376545 NUDCD1Q96RS6 583 aa11.1□□□□□ -0.63
ABCF1-202ENST00000376545 TBCBQ99426 244 aa11.1□□□□□ -0.63
ABCF1-202ENST00000376545 C11orf84Q9BUA3 381 aaPredicted RBP11.1□□□□□ -0.63
ABCF1-202ENST00000376545 MMADHCQ9H3L0 296 aaPredicted RBP11.1□□□□□ -0.63
ABCF1-202ENST00000376545 GGA3Q9NZ52 723 aa11.1□□□□□ -0.63
ABCF1-202ENST00000376545 ITGA11Q9UKX5 1188 aa11.1□□□□□ -0.63
ABCF1-202ENST00000376545 MCM3APO60318 1980 aa11.1□□□□□ -0.63
ABCF1-202ENST00000376545 E5RJQ4 531 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 MDM4O15151 490 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 HAUS5O94927 633 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 SLC25A27O95847 323 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 BGNP21810 368 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 CLCN3P51790 818 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 MTM1Q13496 603 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 ZNF534Q76KX8 674 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 TAB3Q8N5C8 712 aaPredicted RBP11.09□□□□□ -0.63
ABCF1-202ENST00000376545 TEX9Q8N6V9 391 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 PCDH19Q8TAB3 1148 aa11.09□□□□□ -0.63
ABCF1-202ENST00000376545 TTC8Q8TAM2 541 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms