RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 NDC80O14777 642 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 CCL23P55773 120 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 HDAC4P56524 1084 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 TXNRD3NBQ6F5E7 133 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 JAMLQ86YT9 394 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 CMTR2Q8IYT2 770 aaKnown RBP11.62□□□□□ -0.55
PDPN-202ENST00000376057 CCHCR1Q8TD31 782 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 FAM172AQ8WUF8 416 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 CASKIN2Q8WXE0 1202 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 ZNF670Q9BS34 389 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 CWH43Q9H720 699 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 TMLHEQ9NVH6 421 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 ATP11BQ9Y2G3 1177 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 I3L4J1 428 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 TRIM66O15016 1216 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 ZBED1O96006 694 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 AMHP03971 560 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 SLC7A5Q01650 507 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 GUCY2DQ02846 1103 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 PTK6Q13882 451 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 SMC1AQ14683 1233 aaKnown RBP11.62□□□□□ -0.55
PDPN-202ENST00000376057 TAF5Q15542 800 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 DPYSL2Q16555 572 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 VARS2Q5ST30 1063 aaKnown RBP11.62□□□□□ -0.55
PDPN-202ENST00000376057 ERMARDQ5T6L9 678 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 DAB2IPQ5VWQ8 1189 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 ZNF280DQ6N043 979 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 ANKS3Q6ZW76 656 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 ANKS1BQ7Z6G8 1248 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 SPATA2LQ8IUW3 424 aaPredicted RBP11.62□□□□□ -0.55
PDPN-202ENST00000376057 CCDC50Q8IVM0 306 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 NTAN1Q96AB6 310 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 PAWRQ96IZ0 340 aaKnown RBP11.62□□□□□ -0.55
PDPN-202ENST00000376057 CFAP57Q96MR6 1250 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 PEBP4Q96S96 227 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 HERPUD2Q9BSE4 406 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 MAFFQ9ULX9 164 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 BACE2Q9Y5Z0 518 aa11.62□□□□□ -0.55
PDPN-202ENST00000376057 TTI1O43156 1089 aa11.61□□□□□ -0.55
PDPN-202ENST00000376057 ZNF189O75820 626 aaPredicted RBP11.61□□□□□ -0.55
PDPN-202ENST00000376057 F9P00740 461 aa11.61□□□□□ -0.55
PDPN-202ENST00000376057 ITGAVP06756 1048 aa11.61□□□□□ -0.55
PDPN-202ENST00000376057 ECHS1P30084 290 aa11.61□□□□□ -0.55
PDPN-202ENST00000376057 SSR1P43307 286 aaKnown RBP11.61□□□□□ -0.55
PDPN-202ENST00000376057 LBX1P52954 281 aa11.61□□□□□ -0.55
PDPN-202ENST00000376057 SCAPQ12770 1279 aa11.61□□□□□ -0.55
PDPN-202ENST00000376057 TFDP2Q14188 446 aa11.61□□□□□ -0.55
PDPN-202ENST00000376057 ATP13A4Q4VNC1 1196 aa11.61□□□□□ -0.55
PDPN-202ENST00000376057 ODF2Q5BJF6 829 aa11.61□□□□□ -0.55
PDPN-202ENST00000376057 FUT10Q6P4F1 479 aa11.61□□□□□ -0.55
PDPN-202ENST00000376057 TMEM199Q8N511 208 aa11.61□□□□□ -0.55
PDPN-202ENST00000376057 CLEC4CQ8WTT0 213 aa11.61□□□□□ -0.55
PDPN-202ENST00000376057 SPATA17Q96L03 361 aa11.61□□□□□ -0.55
PDPN-202ENST00000376057 TMEM106CQ9BVX2 250 aa11.61□□□□□ -0.55
PDPN-202ENST00000376057 PPP1R12CQ9BZL4 782 aa11.61□□□□□ -0.55
PDPN-202ENST00000376057 TMEM30AQ9NV96 361 aa11.61□□□□□ -0.55
PDPN-202ENST00000376057 FAM92AA1XBS5 289 aa11.61□□□□□ -0.55
PDPN-202ENST00000376057 TBKBP1A7MCY6 615 aa11.61□□□□□ -0.55
PDPN-202ENST00000376057 LIASO43766 372 aa11.61□□□□□ -0.55
PDPN-202ENST00000376057 ECEL1O95672 775 aa11.61□□□□□ -0.55
PDPN-202ENST00000376057 BCAR1P56945 870 aa11.61□□□□□ -0.55
PDPN-202ENST00000376057 GPR17Q13304 367 aa11.61□□□□□ -0.55
PDPN-202ENST00000376057 EIF4EBP2Q13542 120 aaPredicted RBP11.61□□□□□ -0.55
PDPN-202ENST00000376057 KCTD6Q8NC69 237 aa11.61□□□□□ -0.55
PDPN-202ENST00000376057 SLC35B2Q8TB61 432 aa11.61□□□□□ -0.55
PDPN-202ENST00000376057 RNF25Q96BH1 459 aaPredicted RBP11.61□□□□□ -0.55
PDPN-202ENST00000376057 CHST7Q9NS84 486 aa11.61□□□□□ -0.55
PDPN-202ENST00000376057 WHRNQ9P202 907 aa11.61□□□□□ -0.55
PDPN-202ENST00000376057 TET1Q8NFU7 2136 aa11.61□□□□□ -0.55
PDPN-202ENST00000376057 LRRD1A4D1F6 860 aa11.6□□□□□ -0.55
PDPN-202ENST00000376057 TRIM43BA6NCK2 446 aa11.6□□□□□ -0.55
PDPN-202ENST00000376057 F8W810 466 aa11.6□□□□□ -0.55
PDPN-202ENST00000376057 FYNP06241 537 aa11.6□□□□□ -0.55
PDPN-202ENST00000376057 RDXP35241 583 aaKnown RBP11.6□□□□□ -0.55
PDPN-202ENST00000376057 CACNA2D1P54289 1103 aa11.6□□□□□ -0.55
PDPN-202ENST00000376057 DPYSL3Q14195 570 aa11.6□□□□□ -0.55
PDPN-202ENST00000376057 C15orf59Q2T9L4 293 aaPredicted RBP11.6□□□□□ -0.55
PDPN-202ENST00000376057 OTUD1Q5VV17 481 aaPredicted RBP11.6□□□□□ -0.55
PDPN-202ENST00000376057 SLC9A4Q6AI14 798 aa11.6□□□□□ -0.55
PDPN-202ENST00000376057 DEFB106AQ8N104 65 aa11.6□□□□□ -0.55
PDPN-202ENST00000376057 SPPL2BQ8TCT7 592 aa11.6□□□□□ -0.55
PDPN-202ENST00000376057 TRIM43Q96BQ3 446 aaPredicted RBP11.6□□□□□ -0.55
PDPN-202ENST00000376057 KCNK16Q96T55 309 aa11.6□□□□□ -0.55
PDPN-202ENST00000376057 ULBP1Q9BZM6 244 aa11.6□□□□□ -0.55
PDPN-202ENST00000376057 PCDHB5Q9Y5E4 795 aa11.6□□□□□ -0.55
PDPN-202ENST00000376057 APOC4-APOC2K7ER74 178 aa11.6□□□□□ -0.55
PDPN-202ENST00000376057 GAS8O95995 478 aa11.6□□□□□ -0.55
PDPN-202ENST00000376057 IGLV3-25P01717 112 aa11.6□□□□□ -0.55
PDPN-202ENST00000376057 APOC2P02655 101 aa11.6□□□□□ -0.55
PDPN-202ENST00000376057 LTFP02788 710 aa11.6□□□□□ -0.55
PDPN-202ENST00000376057 MYBL2P10244 700 aa11.6□□□□□ -0.55
PDPN-202ENST00000376057 ZFXP17010 805 aaPredicted RBP11.6□□□□□ -0.55
PDPN-202ENST00000376057 TGM2P21980 687 aa11.6□□□□□ -0.55
PDPN-202ENST00000376057 HCAR3P49019 387 aa11.6□□□□□ -0.55
PDPN-202ENST00000376057 CAV1Q03135 178 aa11.6□□□□□ -0.55
PDPN-202ENST00000376057 OASLQ15646 514 aaKnown RBP11.6□□□□□ -0.55
PDPN-202ENST00000376057 PAN2Q504Q3 1202 aaKnown RBP11.6□□□□□ -0.55
PDPN-202ENST00000376057 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.6□□□□□ -0.55
PDPN-202ENST00000376057 ARHGAP18Q8N392 663 aa11.6□□□□□ -0.55
PDPN-202ENST00000376057 ZNF276Q8N554 614 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms