RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 CYP2C9P11712 490 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 RPA3P35244 121 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-203ENST00000375274 PNPLA4P41247 253 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 N4BP2L1Q5TBK1 243 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-203ENST00000375274 IRGCQ6NXR0 463 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 NOTUMQ6P988 496 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 AGBL3Q8NEM8 1001 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 LATS2Q9NRM7 1088 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 USP20Q9Y2K6 914 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 SLC30A1Q9Y6M5 507 aa11.92□□□□□ -0.5
PTCH1-203ENST00000375274 M0R3G1 203 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 H2AFYO75367 372 aaKnown RBP11.91□□□□□ -0.5
PTCH1-203ENST00000375274 SERPINE1P05121 402 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 ACO1P21399 889 aaKnown RBP11.91□□□□□ -0.5
PTCH1-203ENST00000375274 EVX2Q03828 476 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 SLFN11Q7Z7L1 901 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 TUBGCP3Q96CW5 907 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 FAR2Q96K12 515 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 PRPF18Q99633 342 aaKnown RBP11.91□□□□□ -0.5
PTCH1-203ENST00000375274 TBC1D10AQ9BXI6 508 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 TCF7L2Q9NQB0 619 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 CHCHD3Q9NX63 227 aaKnown RBP11.91□□□□□ -0.5
PTCH1-203ENST00000375274 CYP39A1Q9NYL5 469 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 NCKIPSDQ9NZQ3 722 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 RUVBL2Q9Y230 463 aaKnown RBP11.91□□□□□ -0.5
PTCH1-203ENST00000375274 STRNO43815 780 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 PSMA4P25789 261 aaKnown RBP11.91□□□□□ -0.5
PTCH1-203ENST00000375274 CDC25CP30307 473 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 ZNF268Q14587 947 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-203ENST00000375274 ADCK1Q86TW2 530 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 FAM71AQ8IYT1 594 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 URGCPQ8TCY9 931 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 SNRNP27Q8WVK2 155 aaKnown RBP11.91□□□□□ -0.5
PTCH1-203ENST00000375274 CCDC126Q96EE4 140 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 WDCPQ9H6R7 721 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 RIC8BQ9NVN3 520 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 RHBDL2Q9NX52 303 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 ZNF197O14709 1029 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 MEIS2O14770 477 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 STAG3L1P0CL83 205 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 ALADP13716 330 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 MMP13P45452 471 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 RHBDL3P58872 404 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 HGSNATQ68CP4 663 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 KYQ8NBH2 561 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 SHC3Q92529 594 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 SLC4A9Q96Q91 983 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 ATRNO75882 1429 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 ANKRD63C9JTQ0 380 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 RBAK-RBAKDNI3L0D1 243 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 ZBTB24O43167 697 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-203ENST00000375274 KCNA4P22459 653 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 AVPR1AP37288 418 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 BCAT1P54687 386 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 PGM5Q15124 567 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 RNF219Q5W0B1 726 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-203ENST00000375274 RNF43Q68DV7 783 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 EFHBQ8N7U6 833 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 COLGALT1Q8NBJ5 622 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 ART4Q93070 314 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 TBCBQ99426 244 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 ZNF184Q99676 751 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-203ENST00000375274 IARS2Q9NSE4 1012 aaKnown RBP11.91□□□□□ -0.5
PTCH1-203ENST00000375274 DDX28Q9NUL7 540 aaKnown RBP11.91□□□□□ -0.5
PTCH1-203ENST00000375274 SLC38A7Q9NVC3 462 aa11.91□□□□□ -0.5
PTCH1-203ENST00000375274 ADGRA2Q96PE1 1338 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 APOC4-APOC2K7ER74 178 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 DAB1O75553 588 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 APOC2P02655 101 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 CYP2F1P24903 491 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 GP5P40197 560 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 OASLQ15646 514 aaKnown RBP11.9□□□□□ -0.5
PTCH1-203ENST00000375274 NIPA1Q7RTP0 329 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 EFL1Q7Z2Z2 1120 aaKnown RBP11.9□□□□□ -0.5
PTCH1-203ENST00000375274 SAMD7Q7Z3H4 446 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 SLC9A9Q8IVB4 645 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.9□□□□□ -0.5
PTCH1-203ENST00000375274 MIEF2Q96C03 454 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 KIAA1683Q9H0B3 1180 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 GGA3Q9NZ52 723 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 AP4S1Q9Y587 144 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 CYP3A7-CYP3A51PA0A087WV96 503 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 SNUPNO95149 360 aaKnown RBP11.9□□□□□ -0.5
PTCH1-203ENST00000375274 CXCL8P10145 99 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 VCAM1P19320 739 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 CYP3A7P24462 503 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 FLT3P36888 993 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 SLC1A6P48664 564 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 BACE1P56817 501 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 GRIK5Q16478 980 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 KCTD19Q17RG1 926 aaPredicted RBP11.9□□□□□ -0.5
PTCH1-203ENST00000375274 UNC45BQ8IWX7 931 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 CYP4F12Q9HCS2 524 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 CD274Q9NZQ7 290 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 PSMD10O75832 226 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 CSPG5O95196 566 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 JCHAINP01591 159 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 CYP1A2P05177 515 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 HMBSP08397 361 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 FGRP09769 529 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms