RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 FAR1Q8WVX9 515 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 XPR1Q9UBH6 696 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 KIAA0232Q92628 1395 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 RNMTO43148 476 aaKnown RBP6.82□□□□□ -1.32
UBR4-204ENST00000375254 TEX33O43247 280 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 NUDT7P0C024 238 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 WEE2P0C1S8 567 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 PRDX6P30041 224 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 NME5P56597 212 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 DRAP1Q14919 205 aaPredicted RBP6.82□□□□□ -1.32
UBR4-204ENST00000375254 FBXO42Q6P3S6 717 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 PROSER1Q86XN7 944 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 DDIASQ8IXT1 998 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 CENPLQ8N0S6 344 aaPredicted RBP6.82□□□□□ -1.32
UBR4-204ENST00000375254 HTATIP2Q9BUP3 242 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 BTBD19C9JJ37 291 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 UGT2B11O75310 529 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 TMEM253P0C7T8 217 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 KCNJ2P63252 427 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 FRG1Q14331 258 aaKnown RBP6.81□□□□□ -1.32
UBR4-204ENST00000375254 TAMM41Q96BW9 452 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 SUGCTQ9HAC7 445 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 CCDC177Q9NQR7 707 aaPredicted RBP6.81□□□□□ -1.32
UBR4-204ENST00000375254 PABPC4LP0CB38 370 aaKnown RBP6.81□□□□□ -1.32
UBR4-204ENST00000375254 HSMCR30P0CW71 290 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 CHKAP35790 457 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 FDFT1P37268 417 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 RAB5BP61020 215 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 CDK16Q00536 496 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 PRR5LQ6MZQ0 368 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 NLRX1Q86UT6 975 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 CCDC71Q8IV32 467 aaPredicted RBP6.81□□□□□ -1.32
UBR4-204ENST00000375254 SPIRE2Q8WWL2 714 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 C7orf25Q9BPX7 421 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 SLC25A23Q9BV35 468 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 IRX2Q9BZI1 471 aaPredicted RBP6.81□□□□□ -1.32
UBR4-204ENST00000375254 ZC3H12CQ9C0D7 883 aaKnown RBP6.81□□□□□ -1.32
UBR4-204ENST00000375254 FAM86C2PA6NEL3 165 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 MAGEB2O15479 319 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 POLBP06746 335 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 NUDT17P0C025 328 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 GSTT2BP0CG30 244 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 ATF3P18847 181 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 BNIP2Q12982 314 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 MAB21L1Q13394 359 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 TBCELQ5QJ74 424 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 PERM1Q5SV97 790 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 TMEM26Q6ZUK4 368 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 TCF12Q99081 682 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 ZFYVE28Q9HCC9 887 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 PTPRKQ15262 1439 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 BCAR1P56945 870 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 ZNF564Q8TBZ8 553 aaPredicted RBP6.81□□□□□ -1.32
UBR4-204ENST00000375254 FNDC8Q8TC99 324 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 ZNF304Q9HCX3 659 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 PRDM5Q9NQX1 630 aaPredicted RBP6.81□□□□□ -1.32
UBR4-204ENST00000375254 EIF3LQ9Y262 564 aaKnown RBP6.81□□□□□ -1.32
UBR4-204ENST00000375254 AQRO60306 1485 aaKnown RBP eCLIP6.81□□□□□ -1.323e-7■■■■■ 28.2
UBR4-204ENST00000375254 UGT1A9O60656 530 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 SOAT2O75908 522 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 UGT1A6P19224 532 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 UGT1A1P22309 533 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 UGT1A4P22310 534 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 UGT1A3P35503 534 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 UGT1A5P35504 534 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 PTK7Q13308 1070 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 SLC39A6Q13433 755 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 KYAT1Q16773 422 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 ZNF57Q68EA5 555 aaPredicted RBP6.81□□□□□ -1.32
UBR4-204ENST00000375254 ASB15Q8WXK1 588 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 NUDT16Q96DE0 195 aaKnown RBP6.81□□□□□ -1.32
UBR4-204ENST00000375254 AIF1LQ9BQI0 150 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 SLC4A5Q9BY07 1137 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 UGT1A7Q9HAW7 530 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 UGT1A10Q9HAW8 530 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 UGT1A8Q9HAW9 530 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 PCDH12Q9NPG4 1184 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 KAT6BQ8WYB5 2073 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 SDR42E2A6NKP2 422 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 WRBO00258 174 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 MBD4O95243 580 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 SIPA1Q96FS4 1042 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 UFSP2Q9NUQ7 469 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 PHF8Q9UPP1 1060 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 MAP3K15Q6ZN16 1313 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 RBM34P42696 430 aaKnown RBP6.81□□□□□ -1.32
UBR4-204ENST00000375254 SULT1C3Q6IMI6 304 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 XAGE3Q8WTP9 111 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 SKA2Q8WVK7 121 aaPredicted RBP6.81□□□□□ -1.32
UBR4-204ENST00000375254 HNRNPABQ99729 332 aaKnown RBP6.81□□□□□ -1.32
UBR4-204ENST00000375254 TMEM120AQ9BXJ8 343 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 ZNF717Q9BY31 904 aaPredicted RBP6.81□□□□□ -1.32
UBR4-204ENST00000375254 GOLPH3Q9H4A6 298 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 B8ZZF3 427 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 B3GALNT1O75752 331 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 ADD2P35612 726 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 PDK1Q15118 436 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 ZNF767PQ75MW2 155 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 CHURC1Q8WUH1 139 aa6.81□□□□□ -1.32
UBR4-204ENST00000375254 FARSBQ9NSD9 589 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms