RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 MATN2O00339 956 aa21.37■■□□□ 1.01
TMEFF1-201ENST00000374879 UNGP13051 313 aaPredicted RBP21.37■■□□□ 1.01
TMEFF1-201ENST00000374879 CACNB3P54284 484 aa21.37■■□□□ 1.01
TMEFF1-201ENST00000374879 CDKL1Q00532 357 aa21.37■■□□□ 1.01
TMEFF1-201ENST00000374879 TCP10Q12799 353 aa21.37■■□□□ 1.01
TMEFF1-201ENST00000374879 LPCAT2Q7L5N7 544 aa21.37■■□□□ 1.01
TMEFF1-201ENST00000374879 BIRC8Q96P09 236 aa21.37■■□□□ 1.01
TMEFF1-201ENST00000374879 C10orf88Q9H8K7 445 aa21.37■■□□□ 1.01
TMEFF1-201ENST00000374879 AVENQ9NQS1 362 aaPredicted RBP21.37■■□□□ 1.01
TMEFF1-201ENST00000374879 KIAA1522Q9P206 1035 aaPredicted RBP21.37■■□□□ 1.01
TMEFF1-201ENST00000374879 ITGB1BP2Q9UKP3 347 aa21.37■■□□□ 1.01
TMEFF1-201ENST00000374879 PSMD13Q9UNM6 376 aa21.37■■□□□ 1.01
TMEFF1-201ENST00000374879 IKBKGQ9Y6K9 419 aa21.37■■□□□ 1.01
TMEFF1-201ENST00000374879 IPO5O00410 1097 aaKnown RBP21.36■■□□□ 1.01
TMEFF1-201ENST00000374879 MEIS2O14770 477 aa21.36■■□□□ 1.01
TMEFF1-201ENST00000374879 MSH4O15457 936 aa21.36■■□□□ 1.01
TMEFF1-201ENST00000374879 GSTT2P0CG29 244 aa21.36■■□□□ 1.01
TMEFF1-201ENST00000374879 GSTT2BP0CG30 244 aa21.36■■□□□ 1.01
TMEFF1-201ENST00000374879 ACADVLP49748 655 aa21.36■■□□□ 1.01
TMEFF1-201ENST00000374879 PSMD6Q15008 389 aa21.36■■□□□ 1.01
TMEFF1-201ENST00000374879 SLFN13Q68D06 897 aa21.36■■□□□ 1.01
TMEFF1-201ENST00000374879 HHIPL2Q6UWX4 724 aa21.36■■□□□ 1.01
TMEFF1-201ENST00000374879 STXBP4Q6ZWJ1 553 aa21.36■■□□□ 1.01
TMEFF1-201ENST00000374879 CBWD1Q9BRT8 395 aa21.36■■□□□ 1.01
TMEFF1-201ENST00000374879 COQ6Q9Y2Z9 468 aa21.36■■□□□ 1.01
TMEFF1-201ENST00000374879 SNCAIPQ9Y6H5 919 aa21.36■■□□□ 1.01
TMEFF1-201ENST00000374879 UBE4BO95155 1302 aa21.36■■□□□ 1.01
TMEFF1-201ENST00000374879 FOXD2O60548 495 aaPredicted RBP21.36■■□□□ 1.01
TMEFF1-201ENST00000374879 FAM155BO75949 473 aa21.36■■□□□ 1.01
TMEFF1-201ENST00000374879 ZBED1O96006 694 aa21.36■■□□□ 1.01
TMEFF1-201ENST00000374879 PDAP1Q13442 181 aaKnown RBP21.36■■□□□ 1.01
TMEFF1-201ENST00000374879 DRICH1Q6PGQ1 229 aaPredicted RBP21.36■■□□□ 1.01
TMEFF1-201ENST00000374879 FBXW8Q8N3Y1 598 aa21.36■■□□□ 1.01
TMEFF1-201ENST00000374879 CYP2W1Q8TAV3 490 aa21.36■■□□□ 1.01
TMEFF1-201ENST00000374879 CPT1BQ92523 772 aa21.36■■□□□ 1.01
TMEFF1-201ENST00000374879 GJD4Q96KN9 370 aaPredicted RBP21.36■■□□□ 1.01
TMEFF1-201ENST00000374879 C6orf203Q9P0P8 240 aaPredicted RBP21.36■■□□□ 1.01
TMEFF1-201ENST00000374879 FADS3Q9Y5Q0 445 aa21.36■■□□□ 1.01
TMEFF1-201ENST00000374879 GREB1LQ9C091 1923 aaPredicted RBP21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 A0A0B4J269 797 aa21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 TCRBV7S3A2A0A539 114 aa21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 G3V3G9 751 aa21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 TBX3O15119 743 aa21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 XPOTO43592 962 aaKnown RBP21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 TCF4P15884 667 aa21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 PHKA2P46019 1235 aa21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 SNAP25P60880 206 aa21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 TUBB3Q13509 450 aa21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 SPIDRQ14159 915 aa21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 CYTH1Q15438 398 aa21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 OASLQ15646 514 aaKnown RBP21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 DCAF8Q5TAQ9 597 aa21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 MFSD7Q6UXD7 560 aa21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 NUDCD3Q8IVD9 361 aa21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 LZTR1Q8N653 840 aa21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 RAB3IL1Q8TBN0 382 aa21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 HELQQ8TDG4 1101 aa21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 CRYGNQ8WXF5 182 aa21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 NLRP4Q96MN2 994 aa21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 APOL6Q9BWW8 343 aa21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 PACSIN3Q9UKS6 424 aa21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 DRG1Q9Y295 367 aaKnown RBP21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 INHBAP08476 426 aa21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 ITGAXP20702 1163 aa21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 CREB5Q02930 508 aa21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 ZCCHC23Q6ZST2 131 aa21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 IGDCC3Q8IVU1 814 aa21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 CCDC33Q8N5R6 958 aa21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 TRIML2Q8N7C3 387 aa21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 PLLPQ9Y342 182 aa21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 QSER1Q2KHR3 1735 aa21.35■■□□□ 1.01
TMEFF1-201ENST00000374879 KRT5P13647 590 aa21.34■■□□□ 1.01
TMEFF1-201ENST00000374879 ITPRIPL1Q6GPH6 555 aa21.34■■□□□ 1.01
TMEFF1-201ENST00000374879 MOXD1Q6UVY6 613 aa21.34■■□□□ 1.01
TMEFF1-201ENST00000374879 GALNT4Q8N4A0 578 aa21.34■■□□□ 1.01
TMEFF1-201ENST00000374879 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.34■■□□□ 1.01
TMEFF1-201ENST00000374879 SLC44A1Q8WWI5 657 aa21.34■■□□□ 1.01
TMEFF1-201ENST00000374879 ZNF512Q96ME7 567 aaPredicted RBP21.34■■□□□ 1.01
TMEFF1-201ENST00000374879 SLC13A1Q9BZW2 595 aa21.34■■□□□ 1.01
TMEFF1-201ENST00000374879 PCDH9Q9HC56 1237 aa21.34■■□□□ 1.01
TMEFF1-201ENST00000374879 SIRPGQ9P1W8 387 aa21.34■■□□□ 1.01
TMEFF1-201ENST00000374879 SORCS3Q9UPU3 1222 aa21.34■■□□□ 1.01
TMEFF1-201ENST00000374879 ASTN2O75129 1339 aaPredicted RBP21.34■■□□□ 1.01
TMEFF1-201ENST00000374879 LOC100653049A0A140TA62 436 aa21.34■■□□□ 1.01
TMEFF1-201ENST00000374879 KRT34O76011 436 aa21.34■■□□□ 1.01
TMEFF1-201ENST00000374879 FBXO21O94952 628 aa21.34■■□□□ 1.01
TMEFF1-201ENST00000374879 CRKP46108 304 aa21.34■■□□□ 1.01
TMEFF1-201ENST00000374879 MRPS5P82675 430 aaKnown RBP21.34■■□□□ 1.01
TMEFF1-201ENST00000374879 CDK18Q07002 472 aa21.34■■□□□ 1.01
TMEFF1-201ENST00000374879 AP3B2Q13367 1082 aa21.34■■□□□ 1.01
TMEFF1-201ENST00000374879 PPIL6Q8IXY8 311 aa21.34■■□□□ 1.01
TMEFF1-201ENST00000374879 DCAF4Q8WV16 495 aa21.34■■□□□ 1.01
TMEFF1-201ENST00000374879 SLITRK1Q96PX8 696 aa21.34■■□□□ 1.01
TMEFF1-201ENST00000374879 ARMC7Q9H6L4 198 aa21.34■■□□□ 1.01
TMEFF1-201ENST00000374879 SEL1LQ9UBV2 794 aa21.34■■□□□ 1.01
TMEFF1-201ENST00000374879 PCDHAC2Q9Y5I4 1007 aa21.34■■□□□ 1.01
TMEFF1-201ENST00000374879 KAT6AQ92794 2004 aa21.33■■□□□ 1.01
TMEFF1-201ENST00000374879 ZMPSTE24O75844 475 aa21.33■■□□□ 1.01
TMEFF1-201ENST00000374879 CLCN2P51788 898 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms