RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 PDSS2Q86YH6 399 aa5.4□□□□□ -1.54
PMS1-202ENST00000374826 DNAAF4Q8WXU2 420 aa5.4□□□□□ -1.54
PMS1-202ENST00000374826 CHMP4CQ96CF2 233 aa5.4□□□□□ -1.54
PMS1-202ENST00000374826 ISCA1Q9BUE6 129 aa5.4□□□□□ -1.54
PMS1-202ENST00000374826 UTP14AQ9BVJ6 771 aaKnown RBP5.4□□□□□ -1.54
PMS1-202ENST00000374826 NYXQ9GZU5 481 aa5.4□□□□□ -1.54
PMS1-202ENST00000374826 BRD9Q9H8M2 597 aa5.4□□□□□ -1.54
PMS1-202ENST00000374826 GNL3LQ9NVN8 582 aaKnown RBP5.4□□□□□ -1.54
PMS1-202ENST00000374826 RLIMQ9NVW2 624 aa5.4□□□□□ -1.54
PMS1-202ENST00000374826 TRMT112Q9UI30 125 aaKnown RBP5.4□□□□□ -1.54
PMS1-202ENST00000374826 POLHQ9Y253 713 aa5.4□□□□□ -1.54
PMS1-202ENST00000374826 DUOX1Q9NRD9 1551 aa5.4□□□□□ -1.55
PMS1-202ENST00000374826 SH3TC1Q8TE82 1336 aa5.4□□□□□ -1.55
PMS1-202ENST00000374826 SCN4AP35499 1836 aa5.39□□□□□ -1.55
PMS1-202ENST00000374826 ANKRD62A6NC57 917 aa5.39□□□□□ -1.55
PMS1-202ENST00000374826 E9PLN8 166 aa5.39□□□□□ -1.55
PMS1-202ENST00000374826 H0YIN7 160 aa5.39□□□□□ -1.55
PMS1-202ENST00000374826 SLC16A6O15403 523 aa5.39□□□□□ -1.55
PMS1-202ENST00000374826 ARIH2O95376 493 aa5.39□□□□□ -1.55
PMS1-202ENST00000374826 IL33O95760 270 aa5.39□□□□□ -1.55
PMS1-202ENST00000374826 IGKV5-2P06315 115 aa5.39□□□□□ -1.55
PMS1-202ENST00000374826 CT47B1P0C2W7 299 aaPredicted RBP5.39□□□□□ -1.55
PMS1-202ENST00000374826 KCNA3P22001 575 aa5.39□□□□□ -1.55
PMS1-202ENST00000374826 GATA3P23771 443 aa5.39□□□□□ -1.55
PMS1-202ENST00000374826 SMARCA1P28370 1054 aa5.39□□□□□ -1.55
PMS1-202ENST00000374826 RARSP54136 660 aaKnown RBP5.39□□□□□ -1.55
PMS1-202ENST00000374826 PSMC1P62191 440 aaKnown RBP5.39□□□□□ -1.55
PMS1-202ENST00000374826 POU6F2P78424 691 aaPredicted RBP5.39□□□□□ -1.55
PMS1-202ENST00000374826 MC2RQ01718 297 aa5.39□□□□□ -1.55
PMS1-202ENST00000374826 NEXNQ0ZGT2 675 aa5.39□□□□□ -1.55
PMS1-202ENST00000374826 DYRK1AQ13627 763 aa5.39□□□□□ -1.55
PMS1-202ENST00000374826 ALDH1L2Q3SY69 923 aa5.39□□□□□ -1.55
PMS1-202ENST00000374826 THEMIS2Q5TEJ8 643 aa5.39□□□□□ -1.55
PMS1-202ENST00000374826 ZNF425Q6IV72 752 aa5.39□□□□□ -1.55
PMS1-202ENST00000374826 TAPT1Q6NXT6 567 aa5.39□□□□□ -1.55
PMS1-202ENST00000374826 VWA1Q6PCB0 445 aa5.39□□□□□ -1.55
PMS1-202ENST00000374826 ADGRG5Q8IZF4 528 aa5.39□□□□□ -1.55
PMS1-202ENST00000374826 CPA6Q8N4T0 437 aa5.39□□□□□ -1.55
PMS1-202ENST00000374826 SNX19Q92543 992 aa5.39□□□□□ -1.55
PMS1-202ENST00000374826 ZNF622Q969S3 477 aaKnown RBP eCLIP5.39□□□□□ -1.55
PMS1-202ENST00000374826 RGMAQ96B86 450 aa5.39□□□□□ -1.55
PMS1-202ENST00000374826 LRIG1Q96JA1 1093 aa5.39□□□□□ -1.55
PMS1-202ENST00000374826 SMOQ99835 787 aa5.39□□□□□ -1.55
PMS1-202ENST00000374826 VKORC1Q9BQB6 163 aa5.39□□□□□ -1.55
PMS1-202ENST00000374826 BRIP1Q9BX63 1249 aa5.39□□□□□ -1.55
PMS1-202ENST00000374826 CWC25Q9NXE8 425 aaPredicted RBP5.39□□□□□ -1.55
PMS1-202ENST00000374826 NOP58Q9Y2X3 529 aaKnown RBP5.39□□□□□ -1.55
PMS1-202ENST00000374826 LUC7L2Q9Y383 392 aaKnown RBP5.39□□□□□ -1.55
PMS1-202ENST00000374826 PCDHA3Q9Y5H8 950 aa5.39□□□□□ -1.55
PMS1-202ENST00000374826 ADAMTSL1Q8N6G6 1762 aa5.39□□□□□ -1.55
PMS1-202ENST00000374826 TRPM7Q96QT4 1865 aa5.39□□□□□ -1.55
PMS1-202ENST00000374826 MYH2Q9UKX2 1941 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 WDR91A4D1P6 747 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 WIPF3A6NGB9 483 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 ZNF785A8K8V0 405 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 E7ENX8 843 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 YY2O15391 372 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 PROM1O43490 865 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 BCAR3O75815 825 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 FTH1P19P0C7X4 201 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 WT1P19544 449 aaPredicted RBP5.38□□□□□ -1.55
PMS1-202ENST00000374826 PRDX5P30044 214 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 PIK3CGP48736 1102 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 EXOSC10Q01780 885 aaKnown RBP5.38□□□□□ -1.55
PMS1-202ENST00000374826 TAP2Q03519 686 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 NOGQ13253 232 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 KIAA1614Q5VZ46 1190 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 USP45Q70EL2 814 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 TMPRSS9Q7Z410 1059 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 GRASPQ7Z6J2 395 aaPredicted RBP5.38□□□□□ -1.55
PMS1-202ENST00000374826 PRR18Q8N4B5 295 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 ZNF366Q8N895 744 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 CCDC191Q8NCU4 936 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 SLC30A5Q8TAD4 765 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 FRAT1Q92837 279 aaPredicted RBP5.38□□□□□ -1.55
PMS1-202ENST00000374826 SCAMP4Q969E2 229 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 TRIB1Q96RU8 372 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 C1orf43Q9BWL3 253 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 SLAMF7Q9NQ25 335 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 CFAP97Q9P2B7 532 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 FEZ2Q9UHY8 353 aaPredicted RBP5.38□□□□□ -1.55
PMS1-202ENST00000374826 NOB1Q9ULX3 412 aaKnown RBP5.38□□□□□ -1.55
PMS1-202ENST00000374826 TNNQ9UQP3 1299 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 ENTPD2Q9Y5L3 495 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 PTPRCP08575 1304 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 RNF123Q5XPI4 1314 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 KIF16BQ96L93 1317 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 CDK5RAP2Q96SN8 1893 aa5.38□□□□□ -1.55
PMS1-202ENST00000374826 COL4A5P29400 1685 aa5.37□□□□□ -1.55
PMS1-202ENST00000374826 AKAP11Q9UKA4 1901 aa5.37□□□□□ -1.55
PMS1-202ENST00000374826 FTLP02792 175 aaPredicted RBP5.37□□□□□ -1.55
PMS1-202ENST00000374826 PCCAP05165 728 aaPredicted RBP5.37□□□□□ -1.55
PMS1-202ENST00000374826 GJB1P08034 283 aa5.37□□□□□ -1.55
PMS1-202ENST00000374826 POU2F2P09086 479 aa5.37□□□□□ -1.55
PMS1-202ENST00000374826 NPR1P16066 1061 aa5.37□□□□□ -1.55
PMS1-202ENST00000374826 YY1P25490 414 aa5.37□□□□□ -1.55
PMS1-202ENST00000374826 NEK2P51955 445 aa5.37□□□□□ -1.55
PMS1-202ENST00000374826 MAPK7Q13164 816 aa5.37□□□□□ -1.55
PMS1-202ENST00000374826 GCKRQ14397 625 aa5.37□□□□□ -1.55
PMS1-202ENST00000374826 HLXQ14774 488 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms