RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 EP400Q96L91 3159 aa5.32□□□□□ -1.56
USP48-202ENST00000374730 PHLPP2Q6ZVD8 1323 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 hCG_1642624A0A1W2PR95 340 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 GOLGA6L9A6NEM1 432 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 PRR5-ARHGAP8B1AHC4 643 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 B5MCH6 92 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 OVOL3O00110 214 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 LAD1O00515 517 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 NPHP1O15259 732 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 RAMP2O60895 175 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 BBOX1O75936 387 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 UFL1O94874 794 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 LPLP06858 475 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 PDGFRBP09619 1106 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 TOP1P11387 765 aaKnown RBP5.31□□□□□ -1.56
USP48-202ENST00000374730 GYS1P13807 737 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 KRT4P19013 534 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 ENPP1P22413 925 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 NR4A1P22736 598 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 LONP1P36776 959 aaKnown RBP5.31□□□□□ -1.56
USP48-202ENST00000374730 LGALS4P56470 323 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 GPSM2P81274 684 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 APBA1Q02410 837 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 ORC2Q13416 577 aaPredicted RBP5.31□□□□□ -1.56
USP48-202ENST00000374730 CUL4BQ13620 913 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 UGT8Q16880 541 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 CT83Q5H943 113 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 GJC2Q5T442 439 aaPredicted RBP5.31□□□□□ -1.56
USP48-202ENST00000374730 SPATA1Q5VX52 437 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 ISM2Q6H9L7 571 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 DRICH1Q6PGQ1 229 aaPredicted RBP5.31□□□□□ -1.56
USP48-202ENST00000374730 APTXQ7Z2E3 356 aaKnown RBP5.31□□□□□ -1.56
USP48-202ENST00000374730 GRAMD1CQ8IYS0 662 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 BLIDQ8IZY5 108 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 LILRA3Q8N6C8 439 aaPredicted RBP5.31□□□□□ -1.56
USP48-202ENST00000374730 PDILTQ8N807 584 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 C4orf32Q8N8J7 132 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 IQUBQ8NA54 791 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 KIF18AQ8NI77 898 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 TBC1D22AQ8WUA7 517 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 DHX58Q96C10 678 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 PAGE5Q96GU1 130 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 RBM17Q96I25 401 aaKnown RBP5.31□□□□□ -1.56
USP48-202ENST00000374730 RAX2Q96IS3 184 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 EPSTI1Q96J88 318 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 CRAMP1Q96RY5 1269 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 DCLRE1CQ96SD1 692 aaKnown RBP5.31□□□□□ -1.56
USP48-202ENST00000374730 SPZ1Q9BXG8 430 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 CD209Q9NNX6 404 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 C11orf21Q9P2W6 132 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 EIF2B4Q9UI10 523 aaKnown RBP5.31□□□□□ -1.56
USP48-202ENST00000374730 MAD2L2Q9UI95 211 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 HS3ST4Q9Y661 456 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 SIPA1L1O43166 1804 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 ADAMTSL1Q8N6G6 1762 aa5.31□□□□□ -1.56
USP48-202ENST00000374730 PSME4Q14997 1843 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 FLT1P17948 1338 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 AFF2P51816 1311 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 ITIH6Q6UXX5 1313 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 MYO3BQ8WXR4 1341 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 VWA3AA6NCI4 1184 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 TMEM232C9JQI7 657 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 hCG_1984214I3L0E3 225 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 ZSCAN12O43309 604 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 BRINP1O60477 761 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 STX10O60499 249 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 EIF3JO75822 258 aaKnown RBP5.3□□□□□ -1.56
USP48-202ENST00000374730 SCAF4O95104 1147 aaKnown RBP5.3□□□□□ -1.56
USP48-202ENST00000374730 SERPINB2P05120 415 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 MYL1P05976 194 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 TSPY3P0CV98 308 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 TSPY8P0CW00 308 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 CTSSP25774 331 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 CRHR1P34998 444 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 PBX1P40424 430 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 PRPHP41219 470 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 BTDP43251 543 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 ID4P47928 161 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 RHBDL3P58872 404 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 SPAG1Q07617 926 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 NCBP1Q09161 790 aaKnown RBP5.3□□□□□ -1.56
USP48-202ENST00000374730 STRN3Q13033 797 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.3□□□□□ -1.56
USP48-202ENST00000374730 SLC35G1Q2M3R5 365 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 GLIPR1L2Q4G1C9 344 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 LY6G5CQ5SRR4 150 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 SPECC1LQ69YQ0 1117 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 ABHD15Q6UXT9 468 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 PIK3AP1Q6ZUJ8 805 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 PDZD4Q76G19 769 aaPredicted RBP5.3□□□□□ -1.56
USP48-202ENST00000374730 KRT26Q7Z3Y9 468 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 TMEM139Q8IV31 216 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 TEX11Q8IYF3 940 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 ZNF444Q8N0Y2 327 aaPredicted RBP5.3□□□□□ -1.56
USP48-202ENST00000374730 ZNF713Q8N859 430 aaPredicted RBP5.3□□□□□ -1.56
USP48-202ENST00000374730 TBC1D16Q8TBP0 767 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 CCDC12Q8WUD4 166 aaPredicted RBP5.3□□□□□ -1.56
USP48-202ENST00000374730 ZNF480Q8WV37 535 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 DYNLL2Q96FJ2 89 aa5.3□□□□□ -1.56
USP48-202ENST00000374730 ERO1AQ96HE7 468 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms