RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 ITPRIPL1Q6GPH6 555 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 ZNF720Q7Z2F6 126 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 DZIP1Q86YF9 867 aaKnown RBP13.4□□□□□ -0.26
PRPF4-201ENST00000374198 TMEM126BQ8IUX1 230 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 FBXO36Q8NEA4 188 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 EXD1Q8NHP7 514 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 SHC3Q92529 594 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 BORCS5Q969J3 196 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 SLC2A11Q9BYW1 496 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 HERC5Q9UII4 1024 aaKnown RBP13.4□□□□□ -0.26
PRPF4-201ENST00000374198 SQORQ9Y6N5 450 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 FBXO21O94952 628 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 PRDX6P30041 224 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 SLC5A3P53794 718 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 CDKL1Q00532 357 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 ASPRV1Q53RT3 343 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 RWDD4Q6NW29 188 aaKnown RBP13.4□□□□□ -0.26
PRPF4-201ENST00000374198 RHPN2Q8IUC4 686 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 SLC9A9Q8IVB4 645 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 ADCY4Q8NFM4 1077 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 TRPC4APQ8TEL6 797 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 MBOAT7Q96N66 472 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 NUF2Q9BZD4 464 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 PAIP1Q9H074 479 aaKnown RBP13.4□□□□□ -0.26
PRPF4-201ENST00000374198 ARMC7Q9H6L4 198 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 JMJD4Q9H9V9 463 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 AVENQ9NQS1 362 aaPredicted RBP13.4□□□□□ -0.26
PRPF4-201ENST00000374198 SIRPGQ9P1W8 387 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 IKBKGQ9Y6K9 419 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 UBE4BO95155 1302 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 COL4A1P02462 1669 aa13.4□□□□□ -0.27
PRPF4-201ENST00000374198 CCDC195A0A1B0GUA6 201 aa13.39□□□□□ -0.27
PRPF4-201ENST00000374198 NFKBIEO00221 500 aa13.39□□□□□ -0.27
PRPF4-201ENST00000374198 PPEF1O14829 653 aaPredicted RBP13.39□□□□□ -0.27
PRPF4-201ENST00000374198 KLRK1P26718 216 aa13.39□□□□□ -0.27
PRPF4-201ENST00000374198 GJC1P36383 396 aa13.39□□□□□ -0.27
PRPF4-201ENST00000374198 VAMP7P51809 220 aa13.39□□□□□ -0.27
PRPF4-201ENST00000374198 CYTH1Q15438 398 aa13.39□□□□□ -0.27
PRPF4-201ENST00000374198 ZNF829Q3KNS6 432 aaPredicted RBP13.39□□□□□ -0.27
PRPF4-201ENST00000374198 NEPROQ6NW34 567 aa13.39□□□□□ -0.27
PRPF4-201ENST00000374198 CENPSQ8N2Z9 138 aa13.39□□□□□ -0.27
PRPF4-201ENST00000374198 DDHD1Q8NEL9 900 aa13.39□□□□□ -0.27
PRPF4-201ENST00000374198 DDX1Q92499 740 aaKnown RBP13.39□□□□□ -0.27
PRPF4-201ENST00000374198 FIZ1Q96SL8 496 aa13.39□□□□□ -0.27
PRPF4-201ENST00000374198 C20orf27Q9GZN8 174 aa13.39□□□□□ -0.27
PRPF4-201ENST00000374198 PARVGQ9HBI0 331 aa13.39□□□□□ -0.27
PRPF4-201ENST00000374198 GPCPD1Q9NPB8 672 aa13.39□□□□□ -0.27
PRPF4-201ENST00000374198 EXOC7Q9UPT5 735 aa13.39□□□□□ -0.27
PRPF4-201ENST00000374198 DRG1Q9Y295 367 aaKnown RBP13.39□□□□□ -0.27
PRPF4-201ENST00000374198 FARP1Q9Y4F1 1045 aaPredicted RBP13.39□□□□□ -0.27
PRPF4-201ENST00000374198 A0A0B4J269 797 aa13.39□□□□□ -0.27
PRPF4-201ENST00000374198 K7EPI3 171 aa13.39□□□□□ -0.27
PRPF4-201ENST00000374198 SNNO75324 88 aaPredicted RBP13.39□□□□□ -0.27
PRPF4-201ENST00000374198 KRT10P13645 584 aa13.39□□□□□ -0.27
PRPF4-201ENST00000374198 ITGAXP20702 1163 aa13.39□□□□□ -0.27
PRPF4-201ENST00000374198 HMOX2P30519 316 aa13.39□□□□□ -0.27
PRPF4-201ENST00000374198 MFAP3P55082 362 aa13.39□□□□□ -0.27
PRPF4-201ENST00000374198 NFX1Q12986 1120 aaKnown RBP13.39□□□□□ -0.27
PRPF4-201ENST00000374198 TUBB3Q13509 450 aa13.39□□□□□ -0.27
PRPF4-201ENST00000374198 ADGRE1Q14246 886 aa13.39□□□□□ -0.27
PRPF4-201ENST00000374198 DEPDC1Q5TB30 811 aa13.39□□□□□ -0.27
PRPF4-201ENST00000374198 KAZNQ674X7 775 aa13.39□□□□□ -0.27
PRPF4-201ENST00000374198 FASTKD5Q7L8L6 764 aaKnown RBP13.39□□□□□ -0.27
PRPF4-201ENST00000374198 MCOLN2Q8IZK6 566 aa13.39□□□□□ -0.27
PRPF4-201ENST00000374198 CGREF1Q99674 301 aa13.39□□□□□ -0.27
PRPF4-201ENST00000374198 GINM1Q9NU53 330 aa13.39□□□□□ -0.27
PRPF4-201ENST00000374198 TRNAU1APQ9NX07 287 aaKnown RBP13.39□□□□□ -0.27
PRPF4-201ENST00000374198 PLLPQ9Y342 182 aa13.39□□□□□ -0.27
PRPF4-201ENST00000374198 SNCAIPQ9Y6H5 919 aa13.39□□□□□ -0.27
PRPF4-201ENST00000374198 GOLGA8TH3BQL2 631 aa13.38□□□□□ -0.27
PRPF4-201ENST00000374198 INHBAP08476 426 aa13.38□□□□□ -0.27
PRPF4-201ENST00000374198 CDH3P22223 829 aa13.38□□□□□ -0.27
PRPF4-201ENST00000374198 S100A1P23297 94 aa13.38□□□□□ -0.27
PRPF4-201ENST00000374198 EIF2B2P49770 351 aaKnown RBP13.38□□□□□ -0.27
PRPF4-201ENST00000374198 ALCAMQ13740 583 aa13.38□□□□□ -0.27
PRPF4-201ENST00000374198 NIPAL1Q6NVV3 410 aa13.38□□□□□ -0.27
PRPF4-201ENST00000374198 DCLRE1AQ6PJP8 1040 aa13.38□□□□□ -0.27
PRPF4-201ENST00000374198 STXBP4Q6ZWJ1 553 aa13.38□□□□□ -0.27
PRPF4-201ENST00000374198 PCGF5Q86SE9 256 aa13.38□□□□□ -0.27
PRPF4-201ENST00000374198 NUDCD3Q8IVD9 361 aa13.38□□□□□ -0.27
PRPF4-201ENST00000374198 ADGRF4Q8IZF3 695 aa13.38□□□□□ -0.27
PRPF4-201ENST00000374198 SLC44A1Q8WWI5 657 aa13.38□□□□□ -0.27
PRPF4-201ENST00000374198 HSPH1Q92598 858 aa13.38□□□□□ -0.27
PRPF4-201ENST00000374198 PLEKHA8Q96JA3 519 aa13.38□□□□□ -0.27
PRPF4-201ENST00000374198 PCDH9Q9HC56 1237 aa13.38□□□□□ -0.27
PRPF4-201ENST00000374198 UTP6Q9NYH9 597 aaKnown RBP13.38□□□□□ -0.27
PRPF4-201ENST00000374198 USP17L15C9J2P7 530 aa13.38□□□□□ -0.27
PRPF4-201ENST00000374198 USP17L13C9JLJ4 530 aa13.38□□□□□ -0.27
PRPF4-201ENST00000374198 USP17L11C9JVI0 530 aa13.38□□□□□ -0.27
PRPF4-201ENST00000374198 USP17L18D6R9N7 530 aa13.38□□□□□ -0.27
PRPF4-201ENST00000374198 USP17L22D6RA61 530 aa13.38□□□□□ -0.27
PRPF4-201ENST00000374198 USP17L17D6RBQ6 530 aa13.38□□□□□ -0.27
PRPF4-201ENST00000374198 USP17L19D6RCP7 530 aa13.38□□□□□ -0.27
PRPF4-201ENST00000374198 USP17L20D6RJB6 530 aa13.38□□□□□ -0.27
PRPF4-201ENST00000374198 XPO1O14980 1071 aaKnown RBP13.38□□□□□ -0.27
PRPF4-201ENST00000374198 NDUFB5O43674 189 aa13.38□□□□□ -0.27
PRPF4-201ENST00000374198 BAIAP3O94812 1187 aa13.38□□□□□ -0.27
PRPF4-201ENST00000374198 STAMBPO95630 424 aa13.38□□□□□ -0.27
PRPF4-201ENST00000374198 IFNB1P01574 187 aa13.38□□□□□ -0.27
PRPF4-201ENST00000374198 ACAT1P24752 427 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms